RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 LINC01600Q96MT4 127 aa7.24□□□□□ -1.25
CLIP1-201ENST00000302528 APLNQ9ULZ1 77 aa7.24□□□□□ -1.25
CLIP1-201ENST00000302528 Q96NJ1 140 aa7.24□□□□□ -1.25
CLIP1-201ENST00000302528 COX6B2Q6YFQ2 88 aa7.24□□□□□ -1.25
CLIP1-201ENST00000302528 Q8NBF4 154 aa7.24□□□□□ -1.25
CLIP1-201ENST00000302528 FHL3Q13643 280 aa7.24□□□□□ -1.25
CLIP1-201ENST00000302528 BCE1O60756 84 aa7.23□□□□□ -1.25
CLIP1-201ENST00000302528 NAV2Q8IVL1 2488 aa7.23□□□□□ -1.25
CLIP1-201ENST00000302528 KRTAP10-9P60411 292 aa7.23□□□□□ -1.25
CLIP1-201ENST00000302528 C11orf72Q8NBR9 251 aa7.23□□□□□ -1.25
CLIP1-201ENST00000302528 KIF25-AS1Q9Y6Z4 181 aa7.23□□□□□ -1.25
CLIP1-201ENST00000302528 A0A1B0GW54 56 aa7.21□□□□□ -1.25
CLIP1-201ENST00000302528 LINC00476Q8WZB0 136 aa7.21□□□□□ -1.25
CLIP1-201ENST00000302528 CDIP1Q9H305 208 aa7.21□□□□□ -1.26
CLIP1-201ENST00000302528 A0A096LNJ9 63 aa7.2□□□□□ -1.26
CLIP1-201ENST00000302528 J3QL48 77 aa7.2□□□□□ -1.26
CLIP1-201ENST00000302528 PHF5AQ7RTV0 110 aaKnown RBP7.2□□□□□ -1.26
CLIP1-201ENST00000302528 LOC101927531A0A1B0GV80 90 aa7.19□□□□□ -1.26
CLIP1-201ENST00000302528 Q6ZRP5 223 aa7.19□□□□□ -1.26
CLIP1-201ENST00000302528 RPL37AP61513 92 aaKnown RBP7.19□□□□□ -1.26
CLIP1-201ENST00000302528 CDSNQ15517 529 aa7.19□□□□□ -1.26
CLIP1-201ENST00000302528 CHTF8P0CG12 524 aa7.18□□□□□ -1.26
CLIP1-201ENST00000302528 ELOF1P60002 83 aaKnown RBP7.18□□□□□ -1.26
CLIP1-201ENST00000302528 AGRNO00468 2067 aa7.18□□□□□ -1.26
CLIP1-201ENST00000302528 IGLV5-39A0A0G2JS06 123 aa7.18□□□□□ -1.26
CLIP1-201ENST00000302528 UQCR11O14957 56 aa7.18□□□□□ -1.26
CLIP1-201ENST00000302528 COX8CQ7Z4L0 72 aa7.18□□□□□ -1.26
CLIP1-201ENST00000302528 EPM2AB3EWF7 344 aa7.17□□□□□ -1.26
CLIP1-201ENST00000302528 C16orf90A8MZG2 172 aa7.17□□□□□ -1.26
CLIP1-201ENST00000302528 RTL8CO15255 209 aa7.17□□□□□ -1.26
CLIP1-201ENST00000302528 RPS28P62857 69 aaKnown RBP7.17□□□□□ -1.26
CLIP1-201ENST00000302528 IGHV3OR16-9A0A0B4J2B5 98 aa7.16□□□□□ -1.26
CLIP1-201ENST00000302528 Q6ZRX8 168 aa7.16□□□□□ -1.26
CLIP1-201ENST00000302528 Q6ZQT0 140 aa7.15□□□□□ -1.26
CLIP1-201ENST00000302528 TM2D3Q9BRN9 247 aa7.15□□□□□ -1.26
CLIP1-201ENST00000302528 ST20-AS1Q8NBB2 130 aa7.14□□□□□ -1.27
CLIP1-201ENST00000302528 COL4A2P08572 1712 aa7.13□□□□□ -1.27
CLIP1-201ENST00000302528 COA5Q86WW8 74 aa7.13□□□□□ -1.27
CLIP1-201ENST00000302528 FAM19A4Q96LR4 140 aa7.13□□□□□ -1.27
CLIP1-201ENST00000302528 LINC00315P59091 139 aa7.13□□□□□ -1.27
CLIP1-201ENST00000302528 LOC110117498A0A087WWA1 95 aa7.13□□□□□ -1.27
CLIP1-201ENST00000302528 F8P00451 2351 aa7.13□□□□□ -1.27
CLIP1-201ENST00000302528 C9orf129Q5T035 196 aaKnown RBP7.12□□□□□ -1.27
CLIP1-201ENST00000302528 FAM218AQ96MZ4 157 aa7.12□□□□□ -1.27
CLIP1-201ENST00000302528 A8MUN3 132 aa7.12□□□□□ -1.27
CLIP1-201ENST00000302528 MRPL34Q9BQ48 92 aaKnown RBP7.12□□□□□ -1.27
CLIP1-201ENST00000302528 CYP4F30PQ9H0H9 118 aa7.12□□□□□ -1.27
CLIP1-201ENST00000302528 MIR22HGQ0VDD5 57 aa7.11□□□□□ -1.27
CLIP1-201ENST00000302528 TRBV7-4A0A0J9YYF1 115 aa7.11□□□□□ -1.27
CLIP1-201ENST00000302528 A8MWP4 228 aa7.1□□□□□ -1.27
CLIP1-201ENST00000302528 IGLV6-57P01721 117 aa7.1□□□□□ -1.27
CLIP1-201ENST00000302528 NBDYA0A0U1RRE5 68 aa7.09□□□□□ -1.27
CLIP1-201ENST00000302528 TET2Q6N021 2002 aaPredicted RBP7.07□□□□□ -1.28
CLIP1-201ENST00000302528 ZNF462Q96JM2 2506 aa7.07□□□□□ -1.28
CLIP1-201ENST00000302528 SMCPP49901 116 aaPredicted RBP7.07□□□□□ -1.28
CLIP1-201ENST00000302528 H3BNG1 76 aa7.07□□□□□ -1.28
CLIP1-201ENST00000302528 ADAMTS20P59510 1910 aa7.06□□□□□ -1.28
CLIP1-201ENST00000302528 LINC01554Q52M75 96 aa7.06□□□□□ -1.28
CLIP1-201ENST00000302528 K7EQZ3 153 aa7.06□□□□□ -1.28
CLIP1-201ENST00000302528 LUZP6Q538Z0 58 aa7.06□□□□□ -1.28
CLIP1-201ENST00000302528 MYO9AB2RTY4 2548 aa7.05□□□□□ -1.28
CLIP1-201ENST00000302528 DSCR10P59022 87 aa7.05□□□□□ -1.28
CLIP1-201ENST00000302528 IGLV5-45A0A087WSX0 123 aa7.04□□□□□ -1.28
CLIP1-201ENST00000302528 A0A1W2PPR1 153 aa7.03□□□□□ -1.28
CLIP1-201ENST00000302528 CDC42SE1Q9NRR8 79 aa7.03□□□□□ -1.28
CLIP1-201ENST00000302528 IGLV5-37A0A075B6J1 123 aa7.02□□□□□ -1.29
CLIP1-201ENST00000302528 LINC01546A6NGU7 62 aa7.02□□□□□ -1.29
CLIP1-201ENST00000302528 C9orf92A6NGG3 77 aa7.02□□□□□ -1.29
CLIP1-201ENST00000302528 HTTP42858 3142 aa7.01□□□□□ -1.29
CLIP1-201ENST00000302528 LINC00588Q9Y4M8 146 aa7.01□□□□□ -1.29
CLIP1-201ENST00000302528 GVQW2A0A096LPI5 108 aaPredicted RBP7.01□□□□□ -1.29
CLIP1-201ENST00000302528 A0A0D9SG42 100 aa7.01□□□□□ -1.29
CLIP1-201ENST00000302528 JMJD1CQ15652 2540 aa7.01□□□□□ -1.29
CLIP1-201ENST00000302528 OBSCN-AS1Q96MR7 158 aa7.01□□□□□ -1.29
CLIP1-201ENST00000302528 ERC2-IT1O76042 136 aa7.01□□□□□ -1.29
CLIP1-201ENST00000302528 LINC00304Q8N9R0 145 aa7□□□□□ -1.29
CLIP1-201ENST00000302528 C5orf42Q9H799 3197 aa7□□□□□ -1.29
CLIP1-201ENST00000302528 C8orf17Q9NRJ1 99 aa7□□□□□ -1.29
CLIP1-201ENST00000302528 PRO0461Q9UI25 63 aa7□□□□□ -1.29
CLIP1-201ENST00000302528 RBM12B-AS1Q9P1G2 102 aa6.99□□□□□ -1.29
CLIP1-201ENST00000302528 RAI1Q7Z5J4 1906 aaPredicted RBP6.99□□□□□ -1.29
CLIP1-201ENST00000302528 CHD7Q9P2D1 2997 aa6.99□□□□□ -1.29
CLIP1-201ENST00000302528 CD164Q04900 197 aa6.98□□□□□ -1.29
CLIP1-201ENST00000302528 FAM168BA1KXE4 195 aa6.98□□□□□ -1.29
CLIP1-201ENST00000302528 LCA10Q71F78 164 aa6.98□□□□□ -1.29
CLIP1-201ENST00000302528 FN1P02751 2386 aaKnown RBP6.97□□□□□ -1.29
CLIP1-201ENST00000302528 WWC2-AS2Q96NR7 200 aa6.97□□□□□ -1.29
CLIP1-201ENST00000302528 TLN2Q9Y4G6 2542 aa6.97□□□□□ -1.29
CLIP1-201ENST00000302528 PIEZO2Q9H5I5 2752 aa6.97□□□□□ -1.29
CLIP1-201ENST00000302528 A0A0C4DFX4 3053 aa6.96□□□□□ -1.3
CLIP1-201ENST00000302528 IGLV5-48A0A075B6I7 105 aa6.96□□□□□ -1.3
CLIP1-201ENST00000302528 A0A1B0GVX0 72 aa6.95□□□□□ -1.3
CLIP1-201ENST00000302528 PRR15Q8IV56 129 aa6.95□□□□□ -1.3
CLIP1-201ENST00000302528 TLN1Q9Y490 2541 aaKnown RBP6.95□□□□□ -1.3
CLIP1-201ENST00000302528 KTN1-AS1Q86SY8 53 aa6.95□□□□□ -1.3
CLIP1-201ENST00000302528 IGFL1Q6UW32 110 aa6.94□□□□□ -1.3
CLIP1-201ENST00000302528 IGLV1-50A0A075B6I6 118 aa6.94□□□□□ -1.3
CLIP1-201ENST00000302528 ZNF575Q86XF7 245 aa6.93□□□□□ -1.3
CLIP1-201ENST00000302528 Q8NAQ8 132 aa6.92□□□□□ -1.3
CLIP1-201ENST00000302528 DNAH10OSP0CZ25 163 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms