RNA–Protein interactions for RNA: ENST00000301935.9

UBXN1-202, Transcript of UBX domain protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBXN1, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-202ENST00000301935 SMIM13P0DJ93 91 aa9.72□□□□□ -0.85
UBXN1-202ENST00000301935 PFN2P35080 140 aa9.72□□□□□ -0.85
UBXN1-202ENST00000301935 SPANXB1Q9NS25 103 aaPredicted RBP9.72□□□□□ -0.85
UBXN1-202ENST00000301935 FAM30AQ9NZY2 134 aa9.72□□□□□ -0.85
UBXN1-202ENST00000301935 C9orf116Q5BN46 136 aaPredicted RBP9.71□□□□□ -0.86
UBXN1-202ENST00000301935 SPANXDQ9BXN6 97 aa9.71□□□□□ -0.86
UBXN1-202ENST00000301935 PRO1933Q9H354 126 aa9.71□□□□□ -0.86
UBXN1-202ENST00000301935 SPANXCQ9NY87 97 aa9.71□□□□□ -0.86
UBXN1-202ENST00000301935 IFITM1P13164 125 aa9.7□□□□□ -0.86
UBXN1-202ENST00000301935 PPDPFQ9H3Y8 114 aa9.7□□□□□ -0.86
UBXN1-202ENST00000301935 LINC00474Q9P2X8 69 aa9.7□□□□□ -0.86
UBXN1-202ENST00000301935 PTTG1IPP53801 180 aa9.69□□□□□ -0.86
UBXN1-202ENST00000301935 SRSF9Q13242 221 aaKnown RBP eCLIP9.69□□□□□ -0.86
UBXN1-202ENST00000301935 TAL2Q16559 108 aa9.69□□□□□ -0.86
UBXN1-202ENST00000301935 LITAFQ99732 161 aa9.69□□□□□ -0.86
UBXN1-202ENST00000301935 HMCN2Q8NDA2 5059 aa9.68□□□□□ -0.86
UBXN1-202ENST00000301935 PLA2G1BP04054 148 aaKnown RBP9.68□□□□□ -0.86
UBXN1-202ENST00000301935 HNRNPA3P51991 378 aaKnown RBP9.68□□□□□ -0.86
UBXN1-202ENST00000301935 SDIM1Q6ZPB5 146 aa9.68□□□□□ -0.86
UBXN1-202ENST00000301935 Q6ZSA8 131 aa9.68□□□□□ -0.86
UBXN1-202ENST00000301935 MIR7-3HGQ8N6C7 128 aa9.68□□□□□ -0.86
UBXN1-202ENST00000301935 LOC107984156A0A0G2JMH3 177 aa9.67□□□□□ -0.86
UBXN1-202ENST00000301935 A0A0U1RRA0 63 aa9.67□□□□□ -0.86
UBXN1-202ENST00000301935 KRTAP29-1A8MX34 341 aaPredicted RBP9.67□□□□□ -0.86
UBXN1-202ENST00000301935 RPL18AQ02543 176 aaKnown RBP9.67□□□□□ -0.86
UBXN1-202ENST00000301935 ADAMTSL4-AS1Q5T5F5 129 aa9.67□□□□□ -0.86
UBXN1-202ENST00000301935 Q6ZRP5 223 aa9.67□□□□□ -0.86
UBXN1-202ENST00000301935 C2orf91Q6ZV80 131 aa9.67□□□□□ -0.86
UBXN1-202ENST00000301935 ARL17AQ8IVW1 177 aa9.67□□□□□ -0.86
UBXN1-202ENST00000301935 LINC00528Q8N1L1 170 aa9.67□□□□□ -0.86
UBXN1-202ENST00000301935 HIST1H4GQ99525 98 aa9.67□□□□□ -0.86
UBXN1-202ENST00000301935 TP73-AS1Q9UF72 201 aa9.67□□□□□ -0.86
UBXN1-202ENST00000301935 SND1-IT1Q9HBX3 110 aa9.66□□□□□ -0.86
UBXN1-202ENST00000301935 LRP1Q07954 4544 aaKnown RBP9.64□□□□□ -0.87
UBXN1-202ENST00000301935 UBR4Q5T4S7 5183 aa9.64□□□□□ -0.87
UBXN1-202ENST00000301935 HSD52Q0P140 79 aa9.64□□□□□ -0.87
UBXN1-202ENST00000301935 GAGE2BQ13066 116 aa9.64□□□□□ -0.87
UBXN1-202ENST00000301935 GAGE2EQ4V326 116 aa9.64□□□□□ -0.87
UBXN1-202ENST00000301935 LINC00308Q8TCZ7 52 aa9.64□□□□□ -0.87
UBXN1-202ENST00000301935 GAGE2DQ9UEU5 116 aa9.64□□□□□ -0.87
UBXN1-202ENST00000301935 RPL24P83731 157 aaKnown RBP9.63□□□□□ -0.87
UBXN1-202ENST00000301935 FAT3Q8TDW7 4589 aa9.63□□□□□ -0.87
UBXN1-202ENST00000301935 DDTP30046 118 aa9.62□□□□□ -0.87
UBXN1-202ENST00000301935 DAND5Q8N907 189 aa9.62□□□□□ -0.87
UBXN1-202ENST00000301935 PLA2G2DQ9UNK4 145 aa9.62□□□□□ -0.87
UBXN1-202ENST00000301935 A0A096LNI7 61 aa9.61□□□□□ -0.87
UBXN1-202ENST00000301935 NDUFC2O95298 119 aa9.61□□□□□ -0.87
UBXN1-202ENST00000301935 MUSTN1Q8IVN3 82 aa9.61□□□□□ -0.87
UBXN1-202ENST00000301935 TMEM238LA0A1B0GVL6 79 aa9.6□□□□□ -0.87
UBXN1-202ENST00000301935 A6NJY4 79 aa9.6□□□□□ -0.87
UBXN1-202ENST00000301935 SCXQ7RTU7 201 aa9.6□□□□□ -0.87
UBXN1-202ENST00000301935 CEND1Q8N111 149 aa9.6□□□□□ -0.87
UBXN1-202ENST00000301935 XAGE1AQ9HD64 81 aa9.6□□□□□ -0.87
UBXN1-202ENST00000301935 LINC01620Q4KN68 170 aa9.59□□□□□ -0.87
UBXN1-202ENST00000301935 C9orf129Q5T035 196 aaKnown RBP9.59□□□□□ -0.87
UBXN1-202ENST00000301935 DPH3Q96FX2 82 aa9.59□□□□□ -0.87
UBXN1-202ENST00000301935 IGKV2-24A0A0C4DH68 120 aa9.58□□□□□ -0.88
UBXN1-202ENST00000301935 M0R143 59 aa9.58□□□□□ -0.88
UBXN1-202ENST00000301935 CTAG1AP78358 180 aa9.58□□□□□ -0.88
UBXN1-202ENST00000301935 SERTAD4-AS1Q5TG53 156 aa9.58□□□□□ -0.88
UBXN1-202ENST00000301935 IGLV5-37A0A075B6J1 123 aa9.57□□□□□ -0.88
UBXN1-202ENST00000301935 KRTAP10-4P60372 401 aaPredicted RBP9.57□□□□□ -0.88
UBXN1-202ENST00000301935 NPC2P61916 151 aa9.57□□□□□ -0.88
UBXN1-202ENST00000301935 SOSTDC1Q6X4U4 206 aa9.57□□□□□ -0.88
UBXN1-202ENST00000301935 SPACA4Q8TDM5 124 aa9.57□□□□□ -0.88
UBXN1-202ENST00000301935 TRBV10-2A0A0K0K1G8 114 aa9.56□□□□□ -0.88
UBXN1-202ENST00000301935 NKAPP1Q8N9T2 125 aa9.55□□□□□ -0.88
UBXN1-202ENST00000301935 PKHD1L1Q86WI1 4243 aa9.55□□□□□ -0.88
UBXN1-202ENST00000301935 A4D1N5 150 aa9.54□□□□□ -0.88
UBXN1-202ENST00000301935 CHTF8P0CG12 524 aa9.54□□□□□ -0.88
UBXN1-202ENST00000301935 VPREB1P12018 145 aa9.54□□□□□ -0.88
UBXN1-202ENST00000301935 M0R378 163 aa9.53□□□□□ -0.88
UBXN1-202ENST00000301935 EIF4EBP3O60516 100 aaPredicted RBP9.53□□□□□ -0.88
UBXN1-202ENST00000301935 OXTP01178 125 aa9.53□□□□□ -0.88
UBXN1-202ENST00000301935 LBHQ53QV2 105 aaPredicted RBP9.53□□□□□ -0.88
UBXN1-202ENST00000301935 CIRBP-AS1Q8TBR5 109 aa9.53□□□□□ -0.88
UBXN1-202ENST00000301935 PLAC8Q9NZF1 115 aa9.53□□□□□ -0.88
UBXN1-202ENST00000301935 CBY1Q9Y3M2 126 aa9.53□□□□□ -0.88
UBXN1-202ENST00000301935 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.53□□□□□ -0.88
UBXN1-202ENST00000301935 TRAV13-2A0A0B4J235 113 aa9.52□□□□□ -0.89
UBXN1-202ENST00000301935 A0A087WYN8 130 aa9.51□□□□□ -0.89
UBXN1-202ENST00000301935 BVES-AS1Q5T3Y7 98 aa9.51□□□□□ -0.89
UBXN1-202ENST00000301935 C22orf24Q9Y442 160 aa9.51□□□□□ -0.89
UBXN1-202ENST00000301935 A0A0B4J2C4 111 aa9.5□□□□□ -0.89
UBXN1-202ENST00000301935 A0A1W2PNN7 141 aa9.5□□□□□ -0.89
UBXN1-202ENST00000301935 A6NDN8 102 aa9.5□□□□□ -0.89
UBXN1-202ENST00000301935 HINT1P49773 126 aaPredicted RBP9.5□□□□□ -0.89
UBXN1-202ENST00000301935 FXYD2P54710 66 aa9.5□□□□□ -0.89
UBXN1-202ENST00000301935 FAM19A5Q7Z5A7 132 aaPredicted RBP9.5□□□□□ -0.89
UBXN1-202ENST00000301935 FAM168BA1KXE4 195 aa9.49□□□□□ -0.89
UBXN1-202ENST00000301935 PCP4L1A6NKN8 68 aa9.49□□□□□ -0.89
UBXN1-202ENST00000301935 PANO1I0J062 215 aa9.49□□□□□ -0.89
UBXN1-202ENST00000301935 M0QXV9 152 aa9.49□□□□□ -0.89
UBXN1-202ENST00000301935 MRPL55Q7Z7F7 128 aaKnown RBP9.49□□□□□ -0.89
UBXN1-202ENST00000301935 TMEM126AQ9H061 195 aa9.49□□□□□ -0.89
UBXN1-202ENST00000301935 IGKV2-28A0A075B6P5 120 aa9.48□□□□□ -0.89
UBXN1-202ENST00000301935 IGKV2D-28P01615 120 aa9.48□□□□□ -0.89
UBXN1-202ENST00000301935 CFC1BP0CG36 223 aa9.48□□□□□ -0.89
UBXN1-202ENST00000301935 CFC1P0CG37 223 aa9.48□□□□□ -0.89
UBXN1-202ENST00000301935 S100A7L2Q5SY68 101 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms