RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 C22orf24Q9Y442 160 aa9.22□□□□□ -0.93
CDH8-201ENST00000299345 WIPF1O43516 503 aa9.22□□□□□ -0.93
CDH8-201ENST00000299345 JMJD7-PLA2G4BH0Y9G9 81 aa9.21□□□□□ -0.93
CDH8-201ENST00000299345 SMCR5Q8TEV8 140 aa9.21□□□□□ -0.93
CDH8-201ENST00000299345 C1orf43Q9BWL3 253 aa9.21□□□□□ -0.94
CDH8-201ENST00000299345 C9orf129Q5T035 196 aaKnown RBP9.2□□□□□ -0.94
CDH8-201ENST00000299345 LAMTOR3Q9UHA4 124 aa9.2□□□□□ -0.94
CDH8-201ENST00000299345 A0A0J9YWU9 116 aa9.2□□□□□ -0.94
CDH8-201ENST00000299345 IGKV2D-24A0A075B6R9 120 aa9.2□□□□□ -0.94
CDH8-201ENST00000299345 NANOS2P60321 138 aaKnown RBP9.2□□□□□ -0.94
CDH8-201ENST00000299345 NHLRC4P0CG21 123 aaPredicted RBP9.19□□□□□ -0.94
CDH8-201ENST00000299345 DEFB131BA0A096LNP1 70 aa9.19□□□□□ -0.94
CDH8-201ENST00000299345 hADV29S1A0JD25 119 aa9.19□□□□□ -0.94
CDH8-201ENST00000299345 KRTAP10-11P60412 298 aa9.19□□□□□ -0.94
CDH8-201ENST00000299345 C11orf45Q8TAV5 145 aa9.19□□□□□ -0.94
CDH8-201ENST00000299345 IGKV3D-7A0A0C4DH55 119 aa9.18□□□□□ -0.94
CDH8-201ENST00000299345 CCDC179H3BU77 68 aa9.18□□□□□ -0.94
CDH8-201ENST00000299345 SDIM1Q6ZPB5 146 aa9.18□□□□□ -0.94
CDH8-201ENST00000299345 C6orf48Q9UBA6 75 aa9.17□□□□□ -0.94
CDH8-201ENST00000299345 H3BNG1 76 aa9.17□□□□□ -0.94
CDH8-201ENST00000299345 KRTAP24-1Q3LI83 254 aa9.16□□□□□ -0.94
CDH8-201ENST00000299345 DIRC1Q969H9 104 aa9.16□□□□□ -0.94
CDH8-201ENST00000299345 LINC00846Q9NV44 126 aa9.16□□□□□ -0.94
CDH8-201ENST00000299345 LINC00575Q6W349 94 aa9.16□□□□□ -0.94
CDH8-201ENST00000299345 ESRGQ1W209 222 aa9.15□□□□□ -0.94
CDH8-201ENST00000299345 MAST4O15021 2626 aa9.15□□□□□ -0.94
CDH8-201ENST00000299345 TRBV10-3A0A0K0K1G6 114 aa9.15□□□□□ -0.94
CDH8-201ENST00000299345 Q8NDZ9 215 aa9.15□□□□□ -0.94
CDH8-201ENST00000299345 STAB1Q9NY15 2570 aa9.14□□□□□ -0.95
CDH8-201ENST00000299345 TRAV23DV6A0A075B6W5 121 aa9.14□□□□□ -0.95
CDH8-201ENST00000299345 CCKP06307 115 aa9.14□□□□□ -0.95
CDH8-201ENST00000299345 GVQW2A0A096LPI5 108 aaPredicted RBP9.14□□□□□ -0.95
CDH8-201ENST00000299345 SS18L2Q9UHA2 77 aa9.14□□□□□ -0.95
CDH8-201ENST00000299345 HIST1H4AP62805 103 aaKnown RBP9.14□□□□□ -0.95
CDH8-201ENST00000299345 RBM3P98179 157 aaKnown RBP9.13□□□□□ -0.95
CDH8-201ENST00000299345 EGFEM1PQ0D2K5 195 aa9.13□□□□□ -0.95
CDH8-201ENST00000299345 Q6ZQY7 126 aa9.13□□□□□ -0.95
CDH8-201ENST00000299345 OBSCN-AS1Q96MR7 158 aa9.13□□□□□ -0.95
CDH8-201ENST00000299345 GHRHP01286 108 aa9.12□□□□□ -0.95
CDH8-201ENST00000299345 UBL5Q9BZL1 73 aa9.12□□□□□ -0.95
CDH8-201ENST00000299345 Q6ZRU5 148 aa9.11□□□□□ -0.95
CDH8-201ENST00000299345 LINC00167Q96N53 147 aa9.11□□□□□ -0.95
CDH8-201ENST00000299345 IGLV6-57P01721 117 aa9.11□□□□□ -0.95
CDH8-201ENST00000299345 COX7BP24311 80 aa9.11□□□□□ -0.95
CDH8-201ENST00000299345 DSCR8Q96T75 97 aa9.11□□□□□ -0.95
CDH8-201ENST00000299345 ZNF73O43830 326 aaPredicted RBP9.1□□□□□ -0.95
CDH8-201ENST00000299345 Q6JHZ5 121 aa9.1□□□□□ -0.95
CDH8-201ENST00000299345 MRAPQ8TCY5 172 aa9.1□□□□□ -0.95
CDH8-201ENST00000299345 NOTCH1P46531 2555 aa9.09□□□□□ -0.95
CDH8-201ENST00000299345 PRB2P02812 416 aaPredicted RBP9.09□□□□□ -0.95
CDH8-201ENST00000299345 SYCNQ0VAF6 134 aa9.09□□□□□ -0.95
CDH8-201ENST00000299345 C9orf153Q5TBE3 101 aa9.09□□□□□ -0.95
CDH8-201ENST00000299345 NDUFC2-KCTD14E9PQ53 114 aa9.08□□□□□ -0.96
CDH8-201ENST00000299345 LINC01556Q5JQF7 62 aa9.08□□□□□ -0.96
CDH8-201ENST00000299345 M0R378 163 aa9.08□□□□□ -0.96
CDH8-201ENST00000299345 C2orf48Q96LS8 159 aa9.08□□□□□ -0.96
CDH8-201ENST00000299345 NKAPP1Q8N9T2 125 aa9.08□□□□□ -0.96
CDH8-201ENST00000299345 ATOX1O00244 68 aa9.07□□□□□ -0.96
CDH8-201ENST00000299345 H3BQ85 93 aa9.07□□□□□ -0.96
CDH8-201ENST00000299345 TRRAPQ9Y4A5 3859 aa9.07□□□□□ -0.96
CDH8-201ENST00000299345 C15orf56Q8N910 161 aa9.06□□□□□ -0.96
CDH8-201ENST00000299345 TRAV10A0A0B4J240 114 aa9.05□□□□□ -0.96
CDH8-201ENST00000299345 A0A087WVE0 104 aa9.05□□□□□ -0.96
CDH8-201ENST00000299345 VPREB1P12018 145 aa9.04□□□□□ -0.96
CDH8-201ENST00000299345 HAMPP81172 84 aa9.04□□□□□ -0.96
CDH8-201ENST00000299345 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.04□□□□□ -0.96
CDH8-201ENST00000299345 UQCRQO14949 82 aa9.03□□□□□ -0.96
CDH8-201ENST00000299345 C3orf22Q8N5N4 141 aa9.03□□□□□ -0.96
CDH8-201ENST00000299345 PDE6GP18545 87 aa9.03□□□□□ -0.96
CDH8-201ENST00000299345 ATP5EP2Q5VTU8 51 aa9.02□□□□□ -0.97
CDH8-201ENST00000299345 COL6A5A8TX70 2615 aa9.02□□□□□ -0.97
CDH8-201ENST00000299345 KRTAP26-1Q6PEX3 210 aa9.02□□□□□ -0.97
CDH8-201ENST00000299345 Q6ZRP5 223 aa9.01□□□□□ -0.97
CDH8-201ENST00000299345 RMI2Q96E14 147 aa9.01□□□□□ -0.97
CDH8-201ENST00000299345 USP17L23D6RBM5 183 aa9□□□□□ -0.97
CDH8-201ENST00000299345 ELOF1P60002 83 aaKnown RBP9□□□□□ -0.97
CDH8-201ENST00000299345 F8WDY8 70 aa9□□□□□ -0.97
CDH8-201ENST00000299345 Q6ZQT0 140 aa9□□□□□ -0.97
CDH8-201ENST00000299345 COX7CP15954 63 aa9□□□□□ -0.97
CDH8-201ENST00000299345 DNAH10OSP0CZ25 163 aa8.99□□□□□ -0.97
CDH8-201ENST00000299345 TENM3Q9P273 2699 aa8.98□□□□□ -0.97
CDH8-201ENST00000299345 TRBV7-6A0A0J9YX20 115 aa8.98□□□□□ -0.97
CDH8-201ENST00000299345 DEFB105AQ8NG35 78 aa8.98□□□□□ -0.97
CDH8-201ENST00000299345 LOC110117498A0A087WWA1 95 aa8.97□□□□□ -0.97
CDH8-201ENST00000299345 UPK3BQ9BT76 320 aa8.97□□□□□ -0.97
CDH8-201ENST00000299345 LINC00588Q9Y4M8 146 aa8.97□□□□□ -0.97
CDH8-201ENST00000299345 FAM19A1Q7Z5A9 133 aa8.96□□□□□ -0.97
CDH8-201ENST00000299345 SERP2Q8N6R1 65 aa8.95□□□□□ -0.98
CDH8-201ENST00000299345 PKD1L1Q8TDX9 2849 aa8.94□□□□□ -0.98
CDH8-201ENST00000299345 MGAM2Q2M2H8 2515 aa8.94□□□□□ -0.98
CDH8-201ENST00000299345 ETDCA0A1B0GVM5 59 aa8.94□□□□□ -0.98
CDH8-201ENST00000299345 C7orf33Q8WU49 177 aa8.94□□□□□ -0.98
CDH8-201ENST00000299345 RPL37AP8A6NKH3 93 aa8.93□□□□□ -0.98
CDH8-201ENST00000299345 Q6ZVQ6 151 aa8.93□□□□□ -0.98
CDH8-201ENST00000299345 LINC00528Q8N1L1 170 aa8.93□□□□□ -0.98
CDH8-201ENST00000299345 SMIM20Q8N5G0 67 aa8.93□□□□□ -0.98
CDH8-201ENST00000299345 M0R2N4 97 aa8.92□□□□□ -0.98
CDH8-201ENST00000299345 SERTAD4-AS1Q5TG53 156 aa8.92□□□□□ -0.98
CDH8-201ENST00000299345 PSCAO43653 123 aa8.91□□□□□ -0.98
CDH8-201ENST00000299345 UBE2DNLQ8IWF7 75 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms