RNA–Protein interactions for RNA: ENST00000297350.8

TNFRSF11B-201, Transcript of TNF receptor superfamily member 11b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF11B, Length 2,402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-201ENST00000297350 UNQ6190/PRO20217Q6UXQ8 127 aa6.76□□□□□ -1.33
TNFRSF11B-201ENST00000297350 Q8N3U1 123 aa6.76□□□□□ -1.33
TNFRSF11B-201ENST00000297350 ZNF561-AS1K7EIQ3 104 aa6.75□□□□□ -1.33
TNFRSF11B-201ENST00000297350 PDE6GP18545 87 aa6.75□□□□□ -1.33
TNFRSF11B-201ENST00000297350 hADV29S1A0JD25 119 aa6.75□□□□□ -1.33
TNFRSF11B-201ENST00000297350 UQCRQO14949 82 aa6.75□□□□□ -1.33
TNFRSF11B-201ENST00000297350 SLPIP03973 132 aa6.75□□□□□ -1.33
TNFRSF11B-201ENST00000297350 C9orf116Q5BN46 136 aaPredicted RBP6.75□□□□□ -1.33
TNFRSF11B-201ENST00000297350 C2orf48Q96LS8 159 aa6.75□□□□□ -1.33
TNFRSF11B-201ENST00000297350 PRR3P79522 188 aaKnown RBP6.74□□□□□ -1.33
TNFRSF11B-201ENST00000297350 EGFEM1PQ0D2K5 195 aa6.74□□□□□ -1.33
TNFRSF11B-201ENST00000297350 C9orf129Q5T035 196 aaKnown RBP6.74□□□□□ -1.33
TNFRSF11B-201ENST00000297350 LINC00846Q9NV44 126 aa6.74□□□□□ -1.33
TNFRSF11B-201ENST00000297350 LOC110117498A0A087WWA1 95 aa6.74□□□□□ -1.33
TNFRSF11B-201ENST00000297350 KRTAP24-1Q3LI83 254 aa6.74□□□□□ -1.33
TNFRSF11B-201ENST00000297350 C10orf25Q5T742 122 aa6.74□□□□□ -1.33
TNFRSF11B-201ENST00000297350 C3orf22Q8N5N4 141 aa6.73□□□□□ -1.33
TNFRSF11B-201ENST00000297350 HIVEP1P15822 2718 aa6.73□□□□□ -1.33
TNFRSF11B-201ENST00000297350 NOTCH2Q04721 2471 aa6.73□□□□□ -1.33
TNFRSF11B-201ENST00000297350 TRBV10-3A0A0K0K1G6 114 aa6.72□□□□□ -1.33
TNFRSF11B-201ENST00000297350 KPRPQ5T749 579 aaPredicted RBP6.72□□□□□ -1.33
TNFRSF11B-201ENST00000297350 C6orf223Q8N319 242 aa6.72□□□□□ -1.33
TNFRSF11B-201ENST00000297350 DIRC1Q969H9 104 aa6.72□□□□□ -1.33
TNFRSF11B-201ENST00000297350 LINC00526Q96FQ7 95 aa6.72□□□□□ -1.33
TNFRSF11B-201ENST00000297350 C6orf48Q9UBA6 75 aa6.72□□□□□ -1.33
TNFRSF11B-201ENST00000297350 RPL18AQ02543 176 aaKnown RBP6.71□□□□□ -1.33
TNFRSF11B-201ENST00000297350 OXLD1Q5BKU9 147 aa6.71□□□□□ -1.33
TNFRSF11B-201ENST00000297350 Q8NDZ9 215 aa6.71□□□□□ -1.33
TNFRSF11B-201ENST00000297350 TRAV23DV6A0A075B6W5 121 aa6.71□□□□□ -1.34
TNFRSF11B-201ENST00000297350 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.71□□□□□ -1.34
TNFRSF11B-201ENST00000297350 RBM3P98179 157 aaKnown RBP6.7□□□□□ -1.34
TNFRSF11B-201ENST00000297350 UBL5Q9BZL1 73 aa6.7□□□□□ -1.34
TNFRSF11B-201ENST00000297350 COX7CP15954 63 aa6.7□□□□□ -1.34
TNFRSF11B-201ENST00000297350 LINC01556Q5JQF7 62 aa6.7□□□□□ -1.34
TNFRSF11B-201ENST00000297350 KRTAP26-1Q6PEX3 210 aa6.7□□□□□ -1.34
TNFRSF11B-201ENST00000297350 CAMK2N2Q96S95 79 aa6.7□□□□□ -1.34
TNFRSF11B-201ENST00000297350 M0R378 163 aa6.69□□□□□ -1.34
TNFRSF11B-201ENST00000297350 C9orf153Q5TBE3 101 aa6.69□□□□□ -1.34
TNFRSF11B-201ENST00000297350 NDUFC2-KCTD14E9PQ53 114 aa6.68□□□□□ -1.34
TNFRSF11B-201ENST00000297350 ZNF73O43830 326 aaPredicted RBP6.68□□□□□ -1.34
TNFRSF11B-201ENST00000297350 Q6ZQT0 140 aa6.68□□□□□ -1.34
TNFRSF11B-201ENST00000297350 WFDC10BQ8IUB3 73 aa6.68□□□□□ -1.34
TNFRSF11B-201ENST00000297350 COX7BP24311 80 aa6.68□□□□□ -1.34
TNFRSF11B-201ENST00000297350 ELOF1P60002 83 aaKnown RBP6.68□□□□□ -1.34
TNFRSF11B-201ENST00000297350 C1orf43Q9BWL3 253 aa6.68□□□□□ -1.34
TNFRSF11B-201ENST00000297350 BCE1O60756 84 aa6.67□□□□□ -1.34
TNFRSF11B-201ENST00000297350 CRYGAP11844 174 aa6.67□□□□□ -1.34
TNFRSF11B-201ENST00000297350 VPREB1P12018 145 aa6.67□□□□□ -1.34
TNFRSF11B-201ENST00000297350 DSCR8Q96T75 97 aa6.67□□□□□ -1.34
TNFRSF11B-201ENST00000297350 IGKV3D-7A0A0C4DH55 119 aa6.67□□□□□ -1.34
TNFRSF11B-201ENST00000297350 Q6ZTC4 211 aa6.67□□□□□ -1.34
TNFRSF11B-201ENST00000297350 LAMTOR3Q9UHA4 124 aa6.67□□□□□ -1.34
TNFRSF11B-201ENST00000297350 KRTAP10-11P60412 298 aa6.66□□□□□ -1.34
TNFRSF11B-201ENST00000297350 SERP2Q8N6R1 65 aa6.66□□□□□ -1.34
TNFRSF11B-201ENST00000297350 C15orf56Q8N910 161 aa6.66□□□□□ -1.34
TNFRSF11B-201ENST00000297350 Q6ZQY7 126 aa6.66□□□□□ -1.34
TNFRSF11B-201ENST00000297350 C3orf56Q8N813 242 aa6.66□□□□□ -1.34
TNFRSF11B-201ENST00000297350 VWFP04275 2813 aa6.65□□□□□ -1.35
TNFRSF11B-201ENST00000297350 F8P00451 2351 aa6.65□□□□□ -1.35
TNFRSF11B-201ENST00000297350 USP17L23D6RBM5 183 aa6.65□□□□□ -1.35
TNFRSF11B-201ENST00000297350 ESRGQ1W209 222 aa6.65□□□□□ -1.35
TNFRSF11B-201ENST00000297350 TEP1Q99973 2627 aaKnown RBP6.64□□□□□ -1.35
TNFRSF11B-201ENST00000297350 DEFB131BA0A096LNP1 70 aa6.64□□□□□ -1.35
TNFRSF11B-201ENST00000297350 DNAH10OSP0CZ25 163 aa6.64□□□□□ -1.35
TNFRSF11B-201ENST00000297350 C11orf45Q8TAV5 145 aa6.64□□□□□ -1.35
TNFRSF11B-201ENST00000297350 XAGE1AQ9HD64 81 aa6.64□□□□□ -1.35
TNFRSF11B-201ENST00000297350 NBEAL2Q6ZNJ1 2754 aa6.64□□□□□ -1.35
TNFRSF11B-201ENST00000297350 HIGD2BQ4VC39 106 aa6.64□□□□□ -1.35
TNFRSF11B-201ENST00000297350 Q6ZRU5 148 aa6.64□□□□□ -1.35
TNFRSF11B-201ENST00000297350 RETNQ9HD89 108 aa6.64□□□□□ -1.35
TNFRSF11B-201ENST00000297350 PLA2G2DQ9UNK4 145 aa6.63□□□□□ -1.35
TNFRSF11B-201ENST00000297350 TLX1NBP0CAT3 122 aa6.62□□□□□ -1.35
TNFRSF11B-201ENST00000297350 CXCL6P80162 114 aa6.62□□□□□ -1.35
TNFRSF11B-201ENST00000297350 SYCNQ0VAF6 134 aa6.62□□□□□ -1.35
TNFRSF11B-201ENST00000297350 TRBV7-4A0A0J9YYF1 115 aa6.62□□□□□ -1.35
TNFRSF11B-201ENST00000297350 FAM19A5Q7Z5A7 132 aaPredicted RBP6.62□□□□□ -1.35
TNFRSF11B-201ENST00000297350 LOC107984640A0A0U1RRK4 108 aa6.61□□□□□ -1.35
TNFRSF11B-201ENST00000297350 LINC00528Q8N1L1 170 aa6.61□□□□□ -1.35
TNFRSF11B-201ENST00000297350 RMI2Q96E14 147 aa6.61□□□□□ -1.35
TNFRSF11B-201ENST00000297350 MRAPQ8TCY5 172 aa6.61□□□□□ -1.35
TNFRSF11B-201ENST00000297350 IGKV2D-24A0A075B6R9 120 aa6.6□□□□□ -1.35
TNFRSF11B-201ENST00000297350 TRAV10A0A0B4J240 114 aa6.6□□□□□ -1.35
TNFRSF11B-201ENST00000297350 TENM1Q9UKZ4 2725 aa6.6□□□□□ -1.35
TNFRSF11B-201ENST00000297350 KCNQ1DNQ9H478 68 aa6.6□□□□□ -1.35
TNFRSF11B-201ENST00000297350 ATRQ13535 2644 aa6.6□□□□□ -1.35
TNFRSF11B-201ENST00000297350 UPK3BQ9BT76 320 aa6.59□□□□□ -1.35
TNFRSF11B-201ENST00000297350 IGLV5-37A0A075B6J1 123 aa6.59□□□□□ -1.35
TNFRSF11B-201ENST00000297350 A0A087WVE0 104 aa6.59□□□□□ -1.35
TNFRSF11B-201ENST00000297350 NKAPP1Q8N9T2 125 aa6.59□□□□□ -1.35
TNFRSF11B-201ENST00000297350 A0A1B0GW54 56 aa6.58□□□□□ -1.36
TNFRSF11B-201ENST00000297350 SEC61GP60059 68 aa6.58□□□□□ -1.36
TNFRSF11B-201ENST00000297350 TMEM258P61165 79 aa6.58□□□□□ -1.36
TNFRSF11B-201ENST00000297350 Q6ZVQ6 151 aa6.58□□□□□ -1.36
TNFRSF11B-201ENST00000297350 LINC01547P58512 204 aaPredicted RBP6.58□□□□□ -1.36
TNFRSF11B-201ENST00000297350 Q6ZRP5 223 aa6.58□□□□□ -1.36
TNFRSF11B-201ENST00000297350 CMYA5Q8N3K9 4069 aa6.58□□□□□ -1.36
TNFRSF11B-201ENST00000297350 DNAH3Q8TD57 4116 aa6.58□□□□□ -1.36
TNFRSF11B-201ENST00000297350 DHRS4-AS1Q9P1J3 65 aa6.57□□□□□ -1.36
TNFRSF11B-201ENST00000297350 J3KT08 172 aa6.57□□□□□ -1.36
TNFRSF11B-201ENST00000297350 PRYO14603 147 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms