RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 LCA10Q71F78 164 aa8.33□□□□□ -1.08
SHROOM3-201ENST00000296043 Q6ZQT0 140 aa8.33□□□□□ -1.08
SHROOM3-201ENST00000296043 LINC01546A6NGU7 62 aa8.32□□□□□ -1.08
SHROOM3-201ENST00000296043 ZNF702PQ9H963 129 aa8.32□□□□□ -1.08
SHROOM3-201ENST00000296043 M0R2N4 97 aa8.31□□□□□ -1.08
SHROOM3-201ENST00000296043 COA5Q86WW8 74 aa8.31□□□□□ -1.08
SHROOM3-201ENST00000296043 ATRQ13535 2644 aa8.31□□□□□ -1.08
SHROOM3-201ENST00000296043 TRAV22A0A0B4J277 110 aa8.31□□□□□ -1.08
SHROOM3-201ENST00000296043 DAZAP2Q15038 168 aaPredicted RBP8.3□□□□□ -1.08
SHROOM3-201ENST00000296043 HECTD1Q9ULT8 2610 aa8.29□□□□□ -1.08
SHROOM3-201ENST00000296043 ADORA2A-AS1P86434 159 aa8.29□□□□□ -1.08
SHROOM3-201ENST00000296043 MAST4O15021 2626 aa8.29□□□□□ -1.08
SHROOM3-201ENST00000296043 LOC110117498A0A087WWA1 95 aa8.28□□□□□ -1.08
SHROOM3-201ENST00000296043 PRR15Q8IV56 129 aa8.28□□□□□ -1.08
SHROOM3-201ENST00000296043 CYP4F30PQ9H0H9 118 aa8.28□□□□□ -1.08
SHROOM3-201ENST00000296043 TP53AIP1Q9HCN2 124 aa8.28□□□□□ -1.08
SHROOM3-201ENST00000296043 LTBP2Q14767 1821 aa8.28□□□□□ -1.08
SHROOM3-201ENST00000296043 LMO4P61968 165 aa8.27□□□□□ -1.09
SHROOM3-201ENST00000296043 LOC101927531A0A1B0GV80 90 aa8.27□□□□□ -1.09
SHROOM3-201ENST00000296043 IGLV5-39A0A0G2JS06 123 aa8.27□□□□□ -1.09
SHROOM3-201ENST00000296043 LINC01600Q96MT4 127 aa8.26□□□□□ -1.09
SHROOM3-201ENST00000296043 LINC01556Q5JQF7 62 aa8.26□□□□□ -1.09
SHROOM3-201ENST00000296043 CENPEQ02224 2701 aa8.25□□□□□ -1.09
SHROOM3-201ENST00000296043 RBM12B-AS1Q9P1G2 102 aa8.25□□□□□ -1.09
SHROOM3-201ENST00000296043 RPL37AP61513 92 aaKnown RBP8.25□□□□□ -1.09
SHROOM3-201ENST00000296043 MRGPRG-AS1Q2M3A8 158 aa8.25□□□□□ -1.09
SHROOM3-201ENST00000296043 Q6YL49 198 aa8.24□□□□□ -1.09
SHROOM3-201ENST00000296043 ERC2-IT1O76042 136 aa8.24□□□□□ -1.09
SHROOM3-201ENST00000296043 C11orf72Q8NBR9 251 aa8.23□□□□□ -1.09
SHROOM3-201ENST00000296043 IGFL2Q6UWQ7 119 aa8.23□□□□□ -1.09
SHROOM3-201ENST00000296043 H7BZZ5 65 aa8.22□□□□□ -1.09
SHROOM3-201ENST00000296043 MIR22HGQ0VDD5 57 aa8.22□□□□□ -1.09
SHROOM3-201ENST00000296043 H3BPC8 53 aa8.22□□□□□ -1.09
SHROOM3-201ENST00000296043 WIPF1O43516 503 aa8.21□□□□□ -1.1
SHROOM3-201ENST00000296043 PIP4P1Q86T03 277 aa8.2□□□□□ -1.1
SHROOM3-201ENST00000296043 CDSNQ15517 529 aa8.19□□□□□ -1.1
SHROOM3-201ENST00000296043 COX8CQ7Z4L0 72 aa8.19□□□□□ -1.1
SHROOM3-201ENST00000296043 MUC22E2RYF6 1773 aaPredicted RBP8.19□□□□□ -1.1
SHROOM3-201ENST00000296043 PLA2G2CQ5R387 149 aa8.18□□□□□ -1.1
SHROOM3-201ENST00000296043 CRIPTQ9P021 101 aa8.18□□□□□ -1.1
SHROOM3-201ENST00000296043 A0A1W2PNU3 283 aaPredicted RBP8.18□□□□□ -1.1
SHROOM3-201ENST00000296043 IGLV1-40P01703 118 aa8.17□□□□□ -1.1
SHROOM3-201ENST00000296043 UQCR11O14957 56 aa8.17□□□□□ -1.1
SHROOM3-201ENST00000296043 Q6ZRU5 148 aa8.16□□□□□ -1.1
SHROOM3-201ENST00000296043 DMBT1Q9UGM3 2413 aaPredicted RBP8.16□□□□□ -1.1
SHROOM3-201ENST00000296043 MOBPQ13875 183 aa8.16□□□□□ -1.1
SHROOM3-201ENST00000296043 Q8NBF4 154 aa8.16□□□□□ -1.1
SHROOM3-201ENST00000296043 KLKP1Q107X0 134 aa8.15□□□□□ -1.1
SHROOM3-201ENST00000296043 A0A1B0GUV1 79 aa8.14□□□□□ -1.11
SHROOM3-201ENST00000296043 ODF3L2Q3SX64 289 aa8.14□□□□□ -1.11
SHROOM3-201ENST00000296043 MGAM2Q2M2H8 2515 aa8.14□□□□□ -1.11
SHROOM3-201ENST00000296043 TRBV7-4A0A0J9YYF1 115 aa8.14□□□□□ -1.11
SHROOM3-201ENST00000296043 COL4A4P53420 1690 aaPredicted RBP8.14□□□□□ -1.11
SHROOM3-201ENST00000296043 KIF25-AS1Q9Y6Z4 181 aa8.13□□□□□ -1.11
SHROOM3-201ENST00000296043 K7EQZ3 153 aa8.13□□□□□ -1.11
SHROOM3-201ENST00000296043 APLNQ9ULZ1 77 aa8.12□□□□□ -1.11
SHROOM3-201ENST00000296043 LINC00476Q8WZB0 136 aa8.12□□□□□ -1.11
SHROOM3-201ENST00000296043 J3QKU1 62 aa8.11□□□□□ -1.11
SHROOM3-201ENST00000296043 C22orf24Q9Y442 160 aa8.11□□□□□ -1.11
SHROOM3-201ENST00000296043 ELOF1P60002 83 aaKnown RBP8.11□□□□□ -1.11
SHROOM3-201ENST00000296043 ST20-AS1Q8NBB2 130 aa8.11□□□□□ -1.11
SHROOM3-201ENST00000296043 Q8NA96 180 aa8.1□□□□□ -1.11
SHROOM3-201ENST00000296043 IGLV5-45A0A087WSX0 123 aa8.1□□□□□ -1.11
SHROOM3-201ENST00000296043 IGHV3OR16-9A0A0B4J2B5 98 aa8.1□□□□□ -1.11
SHROOM3-201ENST00000296043 CDC42SE1Q9NRR8 79 aa8.09□□□□□ -1.11
SHROOM3-201ENST00000296043 IGLV5-52A0A0A0MRZ9 124 aa8.09□□□□□ -1.11
SHROOM3-201ENST00000296043 NOTCH1P46531 2555 aa8.08□□□□□ -1.12
SHROOM3-201ENST00000296043 SPACA4Q8TDM5 124 aa8.08□□□□□ -1.12
SHROOM3-201ENST00000296043 NBEAL1Q6ZS30 2694 aa8.07□□□□□ -1.12
SHROOM3-201ENST00000296043 LITAFQ99732 161 aa8.07□□□□□ -1.12
SHROOM3-201ENST00000296043 Q6ZRX8 168 aa8.07□□□□□ -1.12
SHROOM3-201ENST00000296043 BRI3O95415 125 aa8.07□□□□□ -1.12
SHROOM3-201ENST00000296043 A0A1B0GW54 56 aa8.06□□□□□ -1.12
SHROOM3-201ENST00000296043 FBXL19-AS1Q494R0 122 aa8.06□□□□□ -1.12
SHROOM3-201ENST00000296043 LINC00167Q96N53 147 aa8.06□□□□□ -1.12
SHROOM3-201ENST00000296043 LINC01554Q52M75 96 aa8.05□□□□□ -1.12
SHROOM3-201ENST00000296043 LY6G6CO95867 125 aa8.05□□□□□ -1.12
SHROOM3-201ENST00000296043 C11orf71Q6IPW1 123 aa8.05□□□□□ -1.12
SHROOM3-201ENST00000296043 PRAC1Q96KF2 57 aa8.05□□□□□ -1.12
SHROOM3-201ENST00000296043 C9orf129Q5T035 196 aaKnown RBP8.05□□□□□ -1.12
SHROOM3-201ENST00000296043 A8MWP4 228 aa8.04□□□□□ -1.12
SHROOM3-201ENST00000296043 LINC00315P59091 139 aa8.04□□□□□ -1.12
SHROOM3-201ENST00000296043 LYPD5Q6UWN5 251 aa8.03□□□□□ -1.12
SHROOM3-201ENST00000296043 EPM2AB3EWF7 344 aa8.02□□□□□ -1.13
SHROOM3-201ENST00000296043 LINC00313P59037 77 aa8.01□□□□□ -1.13
SHROOM3-201ENST00000296043 Q5XG85 94 aa8.01□□□□□ -1.13
SHROOM3-201ENST00000296043 CHTF8P0CG12 524 aa8.01□□□□□ -1.13
SHROOM3-201ENST00000296043 A0A0D9SG42 100 aa8□□□□□ -1.13
SHROOM3-201ENST00000296043 Q1T7F1 81 aa8□□□□□ -1.13
SHROOM3-201ENST00000296043 INAFM1C9JVW0 142 aa8□□□□□ -1.13
SHROOM3-201ENST00000296043 CHD6Q8TD26 2715 aa7.99□□□□□ -1.13
SHROOM3-201ENST00000296043 CENPFP49454 3210 aa7.99□□□□□ -1.13
SHROOM3-201ENST00000296043 NUPR2A6NF83 97 aa7.99□□□□□ -1.13
SHROOM3-201ENST00000296043 C1orf134Q5TEV5 83 aa7.98□□□□□ -1.13
SHROOM3-201ENST00000296043 STAB1Q9NY15 2570 aa7.98□□□□□ -1.13
SHROOM3-201ENST00000296043 FAM229BQ4G0N7 80 aa7.97□□□□□ -1.13
SHROOM3-201ENST00000296043 EIF4EBP3O60516 100 aaPredicted RBP7.97□□□□□ -1.13
SHROOM3-201ENST00000296043 LUZP6Q538Z0 58 aa7.96□□□□□ -1.13
SHROOM3-201ENST00000296043 IGLV6-57P01721 117 aa7.96□□□□□ -1.13
SHROOM3-201ENST00000296043 FAM168BA1KXE4 195 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms