RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 FAM19A1Q7Z5A9 133 aa14.69□□□□□ -0.06
U2AF1-201ENST00000291552 RPL24P83731 157 aaKnown RBP14.68□□□□□ -0.06
U2AF1-201ENST00000291552 YPEL4Q96NS1 127 aa14.67□□□□□ -0.06
U2AF1-201ENST00000291552 CHTOPQ9Y3Y2 248 aaKnown RBP14.67□□□□□ -0.06
U2AF1-201ENST00000291552 SFTA2Q6UW10 78 aa14.65□□□□□ -0.06
U2AF1-201ENST00000291552 LINC00304Q8N9R0 145 aa14.65□□□□□ -0.06
U2AF1-201ENST00000291552 TMEM223A0PJW6 202 aa14.64□□□□□ -0.07
U2AF1-201ENST00000291552 RETNLBQ9BQ08 111 aa14.64□□□□□ -0.07
U2AF1-201ENST00000291552 MUC17Q685J3 4493 aa14.63□□□□□ -0.07
U2AF1-201ENST00000291552 SNAPINO95295 136 aa14.62□□□□□ -0.07
U2AF1-201ENST00000291552 SVBPQ8N300 66 aa14.62□□□□□ -0.07
U2AF1-201ENST00000291552 PLEKHB2Q96CS7 222 aa14.62□□□□□ -0.07
U2AF1-201ENST00000291552 TRAV12-1A0A0B4J245 112 aa14.61□□□□□ -0.07
U2AF1-201ENST00000291552 A0A0U1RRA0 63 aa14.61□□□□□ -0.07
U2AF1-201ENST00000291552 LINC00158P58513 81 aa14.61□□□□□ -0.07
U2AF1-201ENST00000291552 IFI27L1Q96BM0 104 aa14.6□□□□□ -0.07
U2AF1-201ENST00000291552 IGKV2D-26A0A0A0MRZ7 120 aa14.59□□□□□ -0.07
U2AF1-201ENST00000291552 C3orf22Q8N5N4 141 aa14.59□□□□□ -0.07
U2AF1-201ENST00000291552 CHCHD1Q96BP2 118 aaKnown RBP14.59□□□□□ -0.07
U2AF1-201ENST00000291552 CBLN2Q8IUK8 224 aa14.58□□□□□ -0.08
U2AF1-201ENST00000291552 NDUFA5Q16718 116 aa14.57□□□□□ -0.08
U2AF1-201ENST00000291552 SMIM13P0DJ93 91 aa14.56□□□□□ -0.08
U2AF1-201ENST00000291552 HIGD2AQ9BW72 106 aa14.56□□□□□ -0.08
U2AF1-201ENST00000291552 FAT4Q6V0I7 4981 aa14.55□□□□□ -0.08
U2AF1-201ENST00000291552 SPRR4Q96PI1 79 aa14.53□□□□□ -0.08
U2AF1-201ENST00000291552 FAM19A2Q8N3H0 131 aa14.51□□□□□ -0.09
U2AF1-201ENST00000291552 MIR7-3HGQ8N6C7 128 aa14.51□□□□□ -0.09
U2AF1-201ENST00000291552 BOD1L2Q8IYS8 172 aa14.5□□□□□ -0.09
U2AF1-201ENST00000291552 NCR3O14931 201 aa14.49□□□□□ -0.09
U2AF1-201ENST00000291552 MEIG1Q5JSS6 88 aa14.49□□□□□ -0.09
U2AF1-201ENST00000291552 PRYO14603 147 aa14.48□□□□□ -0.09
U2AF1-201ENST00000291552 SPRR1AP35321 89 aa14.48□□□□□ -0.09
U2AF1-201ENST00000291552 LINC00310P59036 64 aa14.47□□□□□ -0.09
U2AF1-201ENST00000291552 TSPEAR-AS2P59090 65 aa14.47□□□□□ -0.09
U2AF1-201ENST00000291552 CTAG1AP78358 180 aa14.47□□□□□ -0.09
U2AF1-201ENST00000291552 KRTAP4-16G5E9R7 235 aaPredicted RBP14.46□□□□□ -0.09
U2AF1-201ENST00000291552 HERV-K104P63124 156 aa14.46□□□□□ -0.09
U2AF1-201ENST00000291552 TPRXLQ17RH7 258 aa14.46□□□□□ -0.09
U2AF1-201ENST00000291552 NDUFA12Q9UI09 145 aa14.46□□□□□ -0.09
U2AF1-201ENST00000291552 IGLV7-46A0A075B6I9 117 aa14.45□□□□□ -0.1
U2AF1-201ENST00000291552 HSBP1O75506 76 aa14.45□□□□□ -0.1
U2AF1-201ENST00000291552 KCNQ1DNQ9H478 68 aa14.45□□□□□ -0.1
U2AF1-201ENST00000291552 ATP6V1G1O75348 118 aa14.44□□□□□ -0.1
U2AF1-201ENST00000291552 LINC00337Q8N6G1 96 aa14.44□□□□□ -0.1
U2AF1-201ENST00000291552 H0Y8G0 127 aa14.43□□□□□ -0.1
U2AF1-201ENST00000291552 TRBV10-3A0A0K0K1G6 114 aa14.42□□□□□ -0.1
U2AF1-201ENST00000291552 A0A0U1RQV1 116 aa14.4□□□□□ -0.1
U2AF1-201ENST00000291552 MYMXA0A1B0GTQ4 84 aa14.4□□□□□ -0.1
U2AF1-201ENST00000291552 SMCR5Q8TEV8 140 aa14.4□□□□□ -0.1
U2AF1-201ENST00000291552 ZNF706Q9Y5V0 76 aaPredicted RBP14.4□□□□□ -0.1
U2AF1-201ENST00000291552 SERF1AO75920 110 aa14.39□□□□□ -0.11
U2AF1-201ENST00000291552 TRGC2P03986 189 aa14.39□□□□□ -0.11
U2AF1-201ENST00000291552 DAND5Q8N907 189 aa14.39□□□□□ -0.11
U2AF1-201ENST00000291552 CDIP1Q9H305 208 aa14.39□□□□□ -0.11
U2AF1-201ENST00000291552 ETDCA0A1B0GVM5 59 aa14.37□□□□□ -0.11
U2AF1-201ENST00000291552 LEPROTO15243 131 aa14.37□□□□□ -0.11
U2AF1-201ENST00000291552 SPAG11AQ6PDA7 123 aa14.37□□□□□ -0.11
U2AF1-201ENST00000291552 PPDPFQ9H3Y8 114 aa14.37□□□□□ -0.11
U2AF1-201ENST00000291552 LOC107984156A0A0G2JMH3 177 aa14.36□□□□□ -0.11
U2AF1-201ENST00000291552 LINC00587B1AMM8 73 aa14.36□□□□□ -0.11
U2AF1-201ENST00000291552 LEPROTL1O95214 131 aa14.36□□□□□ -0.11
U2AF1-201ENST00000291552 LCE2AQ5TA79 106 aaPredicted RBP14.36□□□□□ -0.11
U2AF1-201ENST00000291552 ARL17AQ8IVW1 177 aa14.36□□□□□ -0.11
U2AF1-201ENST00000291552 Q8NBF4 154 aa14.36□□□□□ -0.11
U2AF1-201ENST00000291552 MAP1LC3CQ9BXW4 147 aa14.35□□□□□ -0.11
U2AF1-201ENST00000291552 LINC00483Q53H64 154 aa14.34□□□□□ -0.11
U2AF1-201ENST00000291552 B5MCH6 92 aa14.32□□□□□ -0.12
U2AF1-201ENST00000291552 ERC2-IT1O76042 136 aa14.32□□□□□ -0.12
U2AF1-201ENST00000291552 PMCHL2Q9BQD1 86 aa14.32□□□□□ -0.12
U2AF1-201ENST00000291552 J3QQQ9 107 aa14.31□□□□□ -0.12
U2AF1-201ENST00000291552 PLNP26678 52 aa14.31□□□□□ -0.12
U2AF1-201ENST00000291552 TRBV10-2A0A0K0K1G8 114 aa14.29□□□□□ -0.12
U2AF1-201ENST00000291552 FABP4P15090 132 aa14.29□□□□□ -0.12
U2AF1-201ENST00000291552 DDTP30046 118 aa14.29□□□□□ -0.12
U2AF1-201ENST00000291552 Q9BRP9 147 aa14.29□□□□□ -0.12
U2AF1-201ENST00000291552 DPM2O94777 84 aa14.28□□□□□ -0.12
U2AF1-201ENST00000291552 FP248Q71RG6 208 aaPredicted RBP14.28□□□□□ -0.12
U2AF1-201ENST00000291552 GAGE2AQ6NT46 116 aa14.27□□□□□ -0.13
U2AF1-201ENST00000291552 HSPB8Q9UJY1 196 aa14.27□□□□□ -0.13
U2AF1-201ENST00000291552 EIF4EBP3O60516 100 aaPredicted RBP14.25□□□□□ -0.13
U2AF1-201ENST00000291552 NMUP48645 174 aa14.25□□□□□ -0.13
U2AF1-201ENST00000291552 SMCPP49901 116 aaPredicted RBP14.25□□□□□ -0.13
U2AF1-201ENST00000291552 SPANXB1Q9NS25 103 aaPredicted RBP14.25□□□□□ -0.13
U2AF1-201ENST00000291552 IGLV6-57P01721 117 aa14.24□□□□□ -0.13
U2AF1-201ENST00000291552 IGKCP01834 107 aa14.24□□□□□ -0.13
U2AF1-201ENST00000291552 HERVK_113P61574 105 aa14.24□□□□□ -0.13
U2AF1-201ENST00000291552 KRTAP13-3Q3SY46 172 aa14.24□□□□□ -0.13
U2AF1-201ENST00000291552 SOSTDC1Q6X4U4 206 aa14.24□□□□□ -0.13
U2AF1-201ENST00000291552 Q6ZRX8 168 aa14.24□□□□□ -0.13
U2AF1-201ENST00000291552 S100A12P80511 92 aa14.23□□□□□ -0.13
U2AF1-201ENST00000291552 COLCA2A8K830 154 aa14.22□□□□□ -0.13
U2AF1-201ENST00000291552 SPINK1P00995 79 aa14.22□□□□□ -0.13
U2AF1-201ENST00000291552 LGALS3P17931 250 aaKnown RBP14.22□□□□□ -0.13
U2AF1-201ENST00000291552 MOBPQ13875 183 aa14.22□□□□□ -0.13
U2AF1-201ENST00000291552 IGLV9-49A0A0B4J1Y8 123 aa14.21□□□□□ -0.13
U2AF1-201ENST00000291552 NDUFC2O95298 119 aa14.21□□□□□ -0.13
U2AF1-201ENST00000291552 ADAMTSL4-AS1Q5T5F5 129 aa14.2□□□□□ -0.14
U2AF1-201ENST00000291552 LCE2BO14633 110 aa14.19□□□□□ -0.14
U2AF1-201ENST00000291552 MIEN1Q9BRT3 115 aa14.19□□□□□ -0.14
U2AF1-201ENST00000291552 A0A0J9YXY3 114 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 199.1 ms