RNA–Protein interactions for RNA: ENST00000288839.6

SSX2B-201, Transcript of SSX family member 2B, humanhuman

TSL 3

Gene SSX2B, Length 801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2B-201ENST00000288839 TMEM223A0PJW6 202 aa4.29□□□□□ -1.72
SSX2B-201ENST00000288839 FAM168BA1KXE4 195 aa4.29□□□□□ -1.72
SSX2B-201ENST00000288839 NDUFC2-KCTD14E9PQ53 114 aa4.29□□□□□ -1.72
SSX2B-201ENST00000288839 RPL37AP61513 92 aaKnown RBP4.29□□□□□ -1.72
SSX2B-201ENST00000288839 MAP1LC3CQ9BXW4 147 aa4.29□□□□□ -1.72
SSX2B-201ENST00000288839 KRTAP9-8Q9BYQ0 159 aa4.29□□□□□ -1.72
SSX2B-201ENST00000288839 KRTAP3-1Q9BYR8 98 aa4.29□□□□□ -1.72
SSX2B-201ENST00000288839 DPM2O94777 84 aa4.28□□□□□ -1.72
SSX2B-201ENST00000288839 PLNP26678 52 aa4.28□□□□□ -1.72
SSX2B-201ENST00000288839 KRTAP10-4P60372 401 aaPredicted RBP4.28□□□□□ -1.72
SSX2B-201ENST00000288839 C9orf129Q5T035 196 aaKnown RBP4.28□□□□□ -1.72
SSX2B-201ENST00000288839 FAM19A5Q7Z5A7 132 aaPredicted RBP4.28□□□□□ -1.72
SSX2B-201ENST00000288839 ZNF625Q96I27 306 aaPredicted RBP4.28□□□□□ -1.72
SSX2B-201ENST00000288839 XAGE1AQ9HD64 81 aa4.28□□□□□ -1.72
SSX2B-201ENST00000288839 C9orf118A6NHY6 69 aa4.27□□□□□ -1.73
SSX2B-201ENST00000288839 SYS1-DBNDD2H3BUS1 97 aa4.27□□□□□ -1.73
SSX2B-201ENST00000288839 IGKCP01834 107 aa4.27□□□□□ -1.73
SSX2B-201ENST00000288839 C3orf79P0CE67 100 aa4.27□□□□□ -1.73
SSX2B-201ENST00000288839 PFN2P35080 140 aa4.27□□□□□ -1.73
SSX2B-201ENST00000288839 KRTDAPP60985 99 aa4.27□□□□□ -1.73
SSX2B-201ENST00000288839 PHF5AQ7RTV0 110 aaKnown RBP4.27□□□□□ -1.73
SSX2B-201ENST00000288839 KRTAP7-1Q8IUC3 87 aa4.27□□□□□ -1.73
SSX2B-201ENST00000288839 C7orf33Q8WU49 177 aa4.27□□□□□ -1.73
SSX2B-201ENST00000288839 HNRNPA3P51991 378 aaKnown RBP4.26□□□□□ -1.73
SSX2B-201ENST00000288839 TSPEAR-AS2P59090 65 aa4.26□□□□□ -1.73
SSX2B-201ENST00000288839 SERTAD4-AS1Q5TG53 156 aa4.26□□□□□ -1.73
SSX2B-201ENST00000288839 LINC01545Q5VT33 79 aa4.26□□□□□ -1.73
SSX2B-201ENST00000288839 ERG28Q9UKR5 140 aa4.26□□□□□ -1.73
SSX2B-201ENST00000288839 A0A0U1RRA0 63 aa4.25□□□□□ -1.73
SSX2B-201ENST00000288839 M0QXV9 152 aa4.25□□□□□ -1.73
SSX2B-201ENST00000288839 LEPROTO15243 131 aa4.25□□□□□ -1.73
SSX2B-201ENST00000288839 HERVK_113P61574 105 aa4.25□□□□□ -1.73
SSX2B-201ENST00000288839 PET117Q6UWS5 81 aa4.25□□□□□ -1.73
SSX2B-201ENST00000288839 HIST3H2BBQ8N257 126 aa4.25□□□□□ -1.73
SSX2B-201ENST00000288839 NDUFA12Q9UI09 145 aa4.25□□□□□ -1.73
SSX2B-201ENST00000288839 J3QQQ9 107 aa4.24□□□□□ -1.73
SSX2B-201ENST00000288839 S100A6P06703 90 aa4.24□□□□□ -1.73
SSX2B-201ENST00000288839 LINC00158P58513 81 aa4.24□□□□□ -1.73
SSX2B-201ENST00000288839 PRR3P79522 188 aaKnown RBP4.24□□□□□ -1.73
SSX2B-201ENST00000288839 KRTAP11-1Q8IUC1 163 aa4.24□□□□□ -1.73
SSX2B-201ENST00000288839 PLEKHB2Q96CS7 222 aa4.24□□□□□ -1.73
SSX2B-201ENST00000288839 MYMXA0A1B0GTQ4 84 aa4.23□□□□□ -1.73
SSX2B-201ENST00000288839 C5orf52A6NGY3 159 aa4.23□□□□□ -1.73
SSX2B-201ENST00000288839 SMIM13P0DJ93 91 aa4.23□□□□□ -1.73
SSX2B-201ENST00000288839 LGALS3P17931 250 aaKnown RBP4.23□□□□□ -1.73
SSX2B-201ENST00000288839 S100A2P29034 98 aa4.23□□□□□ -1.73
SSX2B-201ENST00000288839 SNRPEP62304 92 aaKnown RBP4.23□□□□□ -1.73
SSX2B-201ENST00000288839 MEIG1Q5JSS6 88 aa4.23□□□□□ -1.73
SSX2B-201ENST00000288839 SFTA2Q6UW10 78 aa4.23□□□□□ -1.73
SSX2B-201ENST00000288839 ATOH7Q8N100 152 aa4.23□□□□□ -1.73
SSX2B-201ENST00000288839 HIST1H2BLQ99880 126 aa4.23□□□□□ -1.73
SSX2B-201ENST00000288839 SND1-IT1Q9HBX3 110 aa4.23□□□□□ -1.73
SSX2B-201ENST00000288839 PSORS1C2Q9UIG4 136 aa4.23□□□□□ -1.73
SSX2B-201ENST00000288839 C22orf24Q9Y442 160 aa4.23□□□□□ -1.73
SSX2B-201ENST00000288839 C20orf202A1L168 122 aa4.22□□□□□ -1.73
SSX2B-201ENST00000288839 GAGE10A6NGK3 116 aa4.22□□□□□ -1.73
SSX2B-201ENST00000288839 E9PLD3 99 aa4.22□□□□□ -1.73
SSX2B-201ENST00000288839 HERV-K104P63124 156 aa4.22□□□□□ -1.73
SSX2B-201ENST00000288839 UBE2BP63146 152 aa4.22□□□□□ -1.73
SSX2B-201ENST00000288839 COX17Q14061 63 aa4.22□□□□□ -1.73
SSX2B-201ENST00000288839 Q8NDZ9 215 aa4.22□□□□□ -1.73
SSX2B-201ENST00000288839 IGKV2D-26A0A0A0MRZ7 120 aa4.21□□□□□ -1.74
SSX2B-201ENST00000288839 RPL37AP8A6NKH3 93 aa4.21□□□□□ -1.74
SSX2B-201ENST00000288839 C1orf137Q5JT78 98 aa4.21□□□□□ -1.74
SSX2B-201ENST00000288839 MRPL55Q7Z7F7 128 aaKnown RBP4.21□□□□□ -1.74
SSX2B-201ENST00000288839 MIR7-3HGQ8N6C7 128 aa4.21□□□□□ -1.74
SSX2B-201ENST00000288839 DAND5Q8N907 189 aa4.21□□□□□ -1.74
SSX2B-201ENST00000288839 TTTY13Q9BZ97 58 aa4.21□□□□□ -1.74
SSX2B-201ENST00000288839 VPREB1P12018 145 aa4.2□□□□□ -1.74
SSX2B-201ENST00000288839 NMUP48645 174 aa4.2□□□□□ -1.74
SSX2B-201ENST00000288839 LBHQ53QV2 105 aaPredicted RBP4.2□□□□□ -1.74
SSX2B-201ENST00000288839 NKAPP1Q8N9T2 125 aa4.2□□□□□ -1.74
SSX2B-201ENST00000288839 LINC00167Q96N53 147 aa4.2□□□□□ -1.74
SSX2B-201ENST00000288839 TP73-AS1Q9UF72 201 aa4.2□□□□□ -1.74
SSX2B-201ENST00000288839 LRP2P98164 4655 aa4.19□□□□□ -1.74
SSX2B-201ENST00000288839 IGLV5-37A0A075B6J1 123 aa4.19□□□□□ -1.74
SSX2B-201ENST00000288839 A0A0J9YXY3 114 aa4.19□□□□□ -1.74
SSX2B-201ENST00000288839 ZNF815PA8K554 130 aa4.19□□□□□ -1.74
SSX2B-201ENST00000288839 LINC00587B1AMM8 73 aa4.19□□□□□ -1.74
SSX2B-201ENST00000288839 IGKV2-28A0A075B6P5 120 aa4.18□□□□□ -1.74
SSX2B-201ENST00000288839 NCR3O14931 201 aa4.18□□□□□ -1.74
SSX2B-201ENST00000288839 IGKV2D-28P01615 120 aa4.18□□□□□ -1.74
SSX2B-201ENST00000288839 IGLV7-43P04211 117 aa4.18□□□□□ -1.74
SSX2B-201ENST00000288839 RPL24P83731 157 aaKnown RBP4.18□□□□□ -1.74
SSX2B-201ENST00000288839 SRSF9Q13242 221 aaKnown RBP eCLIP4.18□□□□□ -1.74
SSX2B-201ENST00000288839 ADAMTSL4-AS1Q5T5F5 129 aa4.18□□□□□ -1.74
SSX2B-201ENST00000288839 BOD1L2Q8IYS8 172 aa4.18□□□□□ -1.74
SSX2B-201ENST00000288839 TMA7Q9Y2S6 64 aaKnown RBP4.18□□□□□ -1.74
SSX2B-201ENST00000288839 KRTAP29-1A8MX34 341 aaPredicted RBP4.17□□□□□ -1.74
SSX2B-201ENST00000288839 NPC2P61916 151 aa4.17□□□□□ -1.74
SSX2B-201ENST00000288839 RNF213Q63HN8 5207 aa4.16□□□□□ -1.74
SSX2B-201ENST00000288839 IGLV1-50A0A075B6I6 118 aa4.16□□□□□ -1.74
SSX2B-201ENST00000288839 TMEM238C9JI98 176 aa4.16□□□□□ -1.74
SSX2B-201ENST00000288839 M0R378 163 aa4.16□□□□□ -1.74
SSX2B-201ENST00000288839 SCGB1D1O95968 90 aa4.16□□□□□ -1.74
SSX2B-201ENST00000288839 SPINK6Q6UWN8 80 aa4.16□□□□□ -1.74
SSX2B-201ENST00000288839 SOSTDC1Q6X4U4 206 aa4.16□□□□□ -1.74
SSX2B-201ENST00000288839 PCP2Q8IVA1 136 aa4.16□□□□□ -1.74
SSX2B-201ENST00000288839 LITAFQ99732 161 aa4.16□□□□□ -1.74
SSX2B-201ENST00000288839 BCE1O60756 84 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms