RNA–Protein interactions for RNA: ENST00000288599.9

NCOA1-201, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCOA1, Length 6,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-201ENST00000288599 CELSR1Q9NYQ6 3014 aa3.14□□□□□ -1.91
NCOA1-201ENST00000288599 LINC00308Q8TCZ7 52 aa3.14□□□□□ -1.91
NCOA1-201ENST00000288599 HIGD1BQ9P298 99 aa3.14□□□□□ -1.91
NCOA1-201ENST00000288599 LRBAP50851 2863 aa3.14□□□□□ -1.91
NCOA1-201ENST00000288599 SMCR5Q8TEV8 140 aa3.14□□□□□ -1.91
NCOA1-201ENST00000288599 YPEL4Q96NS1 127 aa3.14□□□□□ -1.91
NCOA1-201ENST00000288599 KIF25-AS1Q9Y6Z4 181 aa3.14□□□□□ -1.91
NCOA1-201ENST00000288599 GVINP1Q7Z2Y8 2422 aa3.14□□□□□ -1.91
NCOA1-201ENST00000288599 CDKN2A-AS1Q9UH64 79 aa3.14□□□□□ -1.91
NCOA1-201ENST00000288599 NBDYA0A0U1RRE5 68 aa3.13□□□□□ -1.91
NCOA1-201ENST00000288599 CSMD1Q96PZ7 3565 aa3.13□□□□□ -1.91
NCOA1-201ENST00000288599 C8orf87E5RJ46 101 aa3.13□□□□□ -1.91
NCOA1-201ENST00000288599 WISP2O76076 250 aa3.13□□□□□ -1.91
NCOA1-201ENST00000288599 PIEZO2Q9H5I5 2752 aa3.13□□□□□ -1.91
NCOA1-201ENST00000288599 TNCP24821 2201 aa3.13□□□□□ -1.91
NCOA1-201ENST00000288599 A8MUN3 132 aa3.13□□□□□ -1.91
NCOA1-201ENST00000288599 C4orf26Q17RF5 130 aa3.13□□□□□ -1.91
NCOA1-201ENST00000288599 WNK2Q9Y3S1 2297 aa3.13□□□□□ -1.91
NCOA1-201ENST00000288599 C1orf64Q8NEQ6 169 aa3.13□□□□□ -1.91
NCOA1-201ENST00000288599 C11orf1Q9H5F2 150 aa3.13□□□□□ -1.91
NCOA1-201ENST00000288599 SMIM11BQ8TCY0 68 aa3.13□□□□□ -1.91
NCOA1-201ENST00000288599 PCNX1Q96RV3 2341 aa3.13□□□□□ -1.91
NCOA1-201ENST00000288599 NBASA2RRP1 2371 aa3.12□□□□□ -1.91
NCOA1-201ENST00000288599 P0C880 135 aa3.12□□□□□ -1.91
NCOA1-201ENST00000288599 NTM-AS1Q6ZSK4 140 aa3.12□□□□□ -1.91
NCOA1-201ENST00000288599 PSMG3-AS1Q96PY0 264 aa3.12□□□□□ -1.91
NCOA1-201ENST00000288599 COL12A1Q99715 3063 aa3.12□□□□□ -1.91
NCOA1-201ENST00000288599 LINC00959A0A1B0GUT2 108 aa3.12□□□□□ -1.91
NCOA1-201ENST00000288599 SEC61BP60468 96 aaKnown RBP3.12□□□□□ -1.91
NCOA1-201ENST00000288599 CXCL6P80162 114 aa3.12□□□□□ -1.91
NCOA1-201ENST00000288599 C2orf91Q6ZV80 131 aa3.12□□□□□ -1.91
NCOA1-201ENST00000288599 C20orf203Q8NBC4 194 aa3.12□□□□□ -1.91
NCOA1-201ENST00000288599 PRO0461Q9UI25 63 aa3.12□□□□□ -1.91
NCOA1-201ENST00000288599 PRM2P04554 102 aa3.12□□□□□ -1.91
NCOA1-201ENST00000288599 ZNF22P17026 224 aaPredicted RBP3.12□□□□□ -1.91
NCOA1-201ENST00000288599 UNQ9165/PRO28630Q6UXU0 137 aa3.12□□□□□ -1.91
NCOA1-201ENST00000288599 CEP192Q8TEP8 1941 aa3.11□□□□□ -1.91
NCOA1-201ENST00000288599 TLN1Q9Y490 2541 aaKnown RBP3.11□□□□□ -1.91
NCOA1-201ENST00000288599 PRR3P79522 188 aaKnown RBP3.11□□□□□ -1.91
NCOA1-201ENST00000288599 U3KQA8 63 aa3.11□□□□□ -1.91
NCOA1-201ENST00000288599 PTPRBP23467 1997 aa3.11□□□□□ -1.91
NCOA1-201ENST00000288599 IGLV7-46A0A075B6I9 117 aa3.11□□□□□ -1.91
NCOA1-201ENST00000288599 A0A0D9SG42 100 aa3.11□□□□□ -1.91
NCOA1-201ENST00000288599 I3L2K1 104 aa3.11□□□□□ -1.91
NCOA1-201ENST00000288599 H1FX-AS1Q4G0G2 97 aa3.11□□□□□ -1.91
NCOA1-201ENST00000288599 PTPRQQ9UMZ3 2332 aa3.11□□□□□ -1.91
NCOA1-201ENST00000288599 IGLV1-44P01699 117 aa3.11□□□□□ -1.91
NCOA1-201ENST00000288599 OTOGLQ3ZCN5 2332 aa3.11□□□□□ -1.91
NCOA1-201ENST00000288599 MAP1AP78559 2803 aaPredicted RBP3.11□□□□□ -1.91
NCOA1-201ENST00000288599 K7EIM0 57 aa3.1□□□□□ -1.91
NCOA1-201ENST00000288599 ZNF80P51504 273 aaPredicted RBP3.1□□□□□ -1.91
NCOA1-201ENST00000288599 CRYBG3Q68DQ2 2970 aa3.1□□□□□ -1.91
NCOA1-201ENST00000288599 NEXN-AS1Q8NBZ9 246 aa3.1□□□□□ -1.91
NCOA1-201ENST00000288599 PRO3102Q9H379 93 aa3.1□□□□□ -1.91
NCOA1-201ENST00000288599 CHTF8P0CG12 524 aa3.1□□□□□ -1.91
NCOA1-201ENST00000288599 C10orf99Q6UWK7 81 aa3.1□□□□□ -1.91
NCOA1-201ENST00000288599 Q6ZS49 121 aa3.1□□□□□ -1.91
NCOA1-201ENST00000288599 CDC42SE1Q9NRR8 79 aa3.1□□□□□ -1.91
NCOA1-201ENST00000288599 MED13Q9UHV7 2174 aa3.1□□□□□ -1.91
NCOA1-201ENST00000288599 A0A0A0MQY5 61 aa3.1□□□□□ -1.91
NCOA1-201ENST00000288599 DOPEY1Q5JWR5 2465 aa3.1□□□□□ -1.91
NCOA1-201ENST00000288599 NOTCH3Q9UM47 2321 aa3.1□□□□□ -1.91
NCOA1-201ENST00000288599 TM2D3Q9BRN9 247 aa3.1□□□□□ -1.91
NCOA1-201ENST00000288599 WNK1Q9H4A3 2382 aa3.1□□□□□ -1.91
NCOA1-201ENST00000288599 MED12LQ86YW9 2145 aa3.1□□□□□ -1.91
NCOA1-201ENST00000288599 TECTAO75443 2155 aa3.1□□□□□ -1.91
NCOA1-201ENST00000288599 FBXL19-AS1Q494R0 122 aa3.1□□□□□ -1.91
NCOA1-201ENST00000288599 Q8IZM0 81 aa3.1□□□□□ -1.91
NCOA1-201ENST00000288599 LINC00528Q8N1L1 170 aa3.1□□□□□ -1.91
NCOA1-201ENST00000288599 GDF5OSQ5U4N7 250 aa3.09□□□□□ -1.91
NCOA1-201ENST00000288599 K7EQG2 157 aa3.09□□□□□ -1.91
NCOA1-201ENST00000288599 KRTAP27-1Q3LI81 207 aa3.09□□□□□ -1.91
NCOA1-201ENST00000288599 A0A1W2PNM2 257 aa3.09□□□□□ -1.91
NCOA1-201ENST00000288599 LINC01600Q96MT4 127 aa3.09□□□□□ -1.91
NCOA1-201ENST00000288599 A0A087WYN8 130 aa3.09□□□□□ -1.92
NCOA1-201ENST00000288599 C22orf24Q9Y442 160 aa3.09□□□□□ -1.92
NCOA1-201ENST00000288599 LINC00315P59091 139 aa3.09□□□□□ -1.92
NCOA1-201ENST00000288599 PRR9Q5T870 116 aa3.09□□□□□ -1.92
NCOA1-201ENST00000288599 FLNCQ14315 2725 aa3.08□□□□□ -1.92
NCOA1-201ENST00000288599 IGLV5-45A0A087WSX0 123 aa3.08□□□□□ -1.92
NCOA1-201ENST00000288599 Q8N3U1 123 aa3.08□□□□□ -1.92
NCOA1-201ENST00000288599 C16orf95Q9H693 158 aa3.08□□□□□ -1.92
NCOA1-201ENST00000288599 MALRD1Q5VYJ5 2156 aa3.08□□□□□ -1.92
NCOA1-201ENST00000288599 Q6ZQT0 140 aa3.08□□□□□ -1.92
NCOA1-201ENST00000288599 A8MTW9 85 aa3.08□□□□□ -1.92
NCOA1-201ENST00000288599 ERC2-IT1O76042 136 aa3.08□□□□□ -1.92
NCOA1-201ENST00000288599 IGLV1-50A0A075B6I6 118 aa3.07□□□□□ -1.92
NCOA1-201ENST00000288599 FAM167A-AS1Q96KT0 104 aa3.07□□□□□ -1.92
NCOA1-201ENST00000288599 UNQ6190/PRO20217Q6UXQ8 127 aa3.07□□□□□ -1.92
NCOA1-201ENST00000288599 C11orf72Q8NBR9 251 aa3.07□□□□□ -1.92
NCOA1-201ENST00000288599 TRBV10-3A0A0K0K1G6 114 aa3.07□□□□□ -1.92
NCOA1-201ENST00000288599 CNOT1A5YKK6 2376 aaKnown RBP3.07□□□□□ -1.92
NCOA1-201ENST00000288599 NIPBLQ6KC79 2804 aaeCLIP3.07□□□□□ -1.92
NCOA1-201ENST00000288599 TANC2Q9HCD6 1990 aa3.06□□□□□ -1.92
NCOA1-201ENST00000288599 LMO4P61968 165 aa3.06□□□□□ -1.92
NCOA1-201ENST00000288599 OBSCN-AS1Q96MR7 158 aa3.06□□□□□ -1.92
NCOA1-201ENST00000288599 PRO0628Q9UI54 55 aa3.06□□□□□ -1.92
NCOA1-201ENST00000288599 PRR26Q8N8Z3 221 aa3.06□□□□□ -1.92
NCOA1-201ENST00000288599 SMIM29Q86T20 159 aa3.06□□□□□ -1.92
NCOA1-201ENST00000288599 CCDC168Q8NDH2 2452 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms