RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 C22orf24Q9Y442 160 aa12.29□□□□□ -0.44
TIMP4-201ENST00000287814 A0A0U1RRA0 63 aa12.29□□□□□ -0.44
TIMP4-201ENST00000287814 PSORS1C2Q9UIG4 136 aa12.29□□□□□ -0.44
TIMP4-201ENST00000287814 E9PLD3 99 aa12.27□□□□□ -0.45
TIMP4-201ENST00000287814 SMIM13P0DJ93 91 aa12.27□□□□□ -0.45
TIMP4-201ENST00000287814 LINC00158P58513 81 aa12.27□□□□□ -0.45
TIMP4-201ENST00000287814 C12orf57Q99622 126 aa12.27□□□□□ -0.45
TIMP4-201ENST00000287814 PLA2G2DQ9UNK4 145 aa12.27□□□□□ -0.45
TIMP4-201ENST00000287814 MYMXA0A1B0GTQ4 84 aa12.26□□□□□ -0.45
TIMP4-201ENST00000287814 HERV-K104P63124 156 aa12.26□□□□□ -0.45
TIMP4-201ENST00000287814 PKHD1L1Q86WI1 4243 aa12.25□□□□□ -0.45
TIMP4-201ENST00000287814 Q8NDZ9 215 aa12.25□□□□□ -0.45
TIMP4-201ENST00000287814 LGALS3P17931 250 aaKnown RBP12.24□□□□□ -0.45
TIMP4-201ENST00000287814 MEIG1Q5JSS6 88 aa12.24□□□□□ -0.45
TIMP4-201ENST00000287814 LRP1Q07954 4544 aaKnown RBP12.23□□□□□ -0.45
TIMP4-201ENST00000287814 UBE2BP63146 152 aa12.22□□□□□ -0.45
TIMP4-201ENST00000287814 TP73-AS1Q9UF72 201 aa12.22□□□□□ -0.45
TIMP4-201ENST00000287814 IGLV5-37A0A075B6J1 123 aa12.22□□□□□ -0.45
TIMP4-201ENST00000287814 IGKV2D-26A0A0A0MRZ7 120 aa12.22□□□□□ -0.45
TIMP4-201ENST00000287814 C1orf137Q5JT78 98 aa12.22□□□□□ -0.45
TIMP4-201ENST00000287814 MRPL55Q7Z7F7 128 aaKnown RBP12.22□□□□□ -0.45
TIMP4-201ENST00000287814 ATOH7Q8N100 152 aa12.22□□□□□ -0.45
TIMP4-201ENST00000287814 VPREB1P12018 145 aa12.21□□□□□ -0.45
TIMP4-201ENST00000287814 NMUP48645 174 aa12.21□□□□□ -0.45
TIMP4-201ENST00000287814 MIR7-3HGQ8N6C7 128 aa12.21□□□□□ -0.45
TIMP4-201ENST00000287814 C20orf202A1L168 122 aa12.2□□□□□ -0.46
TIMP4-201ENST00000287814 SRSF9Q13242 221 aaKnown RBP eCLIP12.2□□□□□ -0.46
TIMP4-201ENST00000287814 LBHQ53QV2 105 aaPredicted RBP12.2□□□□□ -0.46
TIMP4-201ENST00000287814 LINC00167Q96N53 147 aa12.2□□□□□ -0.46
TIMP4-201ENST00000287814 GAGE10A6NGK3 116 aa12.19□□□□□ -0.46
TIMP4-201ENST00000287814 TTTY13Q9BZ97 58 aa12.19□□□□□ -0.46
TIMP4-201ENST00000287814 LINC00587B1AMM8 73 aa12.18□□□□□ -0.46
TIMP4-201ENST00000287814 DAND5Q8N907 189 aa12.18□□□□□ -0.46
TIMP4-201ENST00000287814 A0A0J9YXY3 114 aa12.17□□□□□ -0.46
TIMP4-201ENST00000287814 RPL37AP8A6NKH3 93 aa12.17□□□□□ -0.46
TIMP4-201ENST00000287814 NKAPP1Q8N9T2 125 aa12.17□□□□□ -0.46
TIMP4-201ENST00000287814 S100A12P80511 92 aa12.16□□□□□ -0.46
TIMP4-201ENST00000287814 ANKRD39Q53RE8 183 aa12.16□□□□□ -0.46
TIMP4-201ENST00000287814 FAT3Q8TDW7 4589 aa12.16□□□□□ -0.46
TIMP4-201ENST00000287814 PCP4L1A6NKN8 68 aa12.15□□□□□ -0.46
TIMP4-201ENST00000287814 IGLV7-43P04211 117 aa12.15□□□□□ -0.46
TIMP4-201ENST00000287814 RPL24P83731 157 aaKnown RBP12.15□□□□□ -0.46
TIMP4-201ENST00000287814 KRTAP29-1A8MX34 341 aaPredicted RBP12.14□□□□□ -0.47
TIMP4-201ENST00000287814 ADAMTSL4-AS1Q5T5F5 129 aa12.14□□□□□ -0.47
TIMP4-201ENST00000287814 SPINK6Q6UWN8 80 aa12.14□□□□□ -0.47
TIMP4-201ENST00000287814 BOD1L2Q8IYS8 172 aa12.13□□□□□ -0.47
TIMP4-201ENST00000287814 ZNF815PA8K554 130 aa12.12□□□□□ -0.47
TIMP4-201ENST00000287814 VAMP8Q9BV40 100 aa12.12□□□□□ -0.47
TIMP4-201ENST00000287814 IGKV2-28A0A075B6P5 120 aa12.11□□□□□ -0.47
TIMP4-201ENST00000287814 IGKV2D-28P01615 120 aa12.11□□□□□ -0.47
TIMP4-201ENST00000287814 LOC107984156A0A0G2JMH3 177 aa12.1□□□□□ -0.47
TIMP4-201ENST00000287814 EIF4EBP3O60516 100 aaPredicted RBP12.1□□□□□ -0.47
TIMP4-201ENST00000287814 ARL17AQ8IVW1 177 aa12.1□□□□□ -0.47
TIMP4-201ENST00000287814 LITAFQ99732 161 aa12.1□□□□□ -0.47
TIMP4-201ENST00000287814 PAM16Q9Y3D7 125 aa12.1□□□□□ -0.47
TIMP4-201ENST00000287814 IGLV1-50A0A075B6I6 118 aa12.1□□□□□ -0.47
TIMP4-201ENST00000287814 OXTP01178 125 aa12.1□□□□□ -0.47
TIMP4-201ENST00000287814 SOSTDC1Q6X4U4 206 aa12.09□□□□□ -0.47
TIMP4-201ENST00000287814 SPATA45Q537H7 98 aa12.07□□□□□ -0.48
TIMP4-201ENST00000287814 PCP2Q8IVA1 136 aa12.07□□□□□ -0.48
TIMP4-201ENST00000287814 DMBT1Q9UGM3 2413 aaPredicted RBP12.07□□□□□ -0.48
TIMP4-201ENST00000287814 M0R378 163 aa12.06□□□□□ -0.48
TIMP4-201ENST00000287814 NCR3O14931 201 aa12.06□□□□□ -0.48
TIMP4-201ENST00000287814 NPC2P61916 151 aa12.06□□□□□ -0.48
TIMP4-201ENST00000287814 J3QL48 77 aa12.06□□□□□ -0.48
TIMP4-201ENST00000287814 BCE1O60756 84 aa12.06□□□□□ -0.48
TIMP4-201ENST00000287814 PRO1933Q9H354 126 aa12.06□□□□□ -0.48
TIMP4-201ENST00000287814 HSBP1L1C9JCN9 74 aa12.05□□□□□ -0.48
TIMP4-201ENST00000287814 TMEM238C9JI98 176 aa12.05□□□□□ -0.48
TIMP4-201ENST00000287814 TIMM17BO60830 172 aa12.05□□□□□ -0.48
TIMP4-201ENST00000287814 HERC1Q15751 4861 aa12.05□□□□□ -0.48
TIMP4-201ENST00000287814 ZNF861PO60384 105 aa12.03□□□□□ -0.48
TIMP4-201ENST00000287814 MT1HL1P0DM35 61 aa12.03□□□□□ -0.48
TIMP4-201ENST00000287814 DIRC1Q969H9 104 aa12.03□□□□□ -0.48
TIMP4-201ENST00000287814 MIEN1Q9BRT3 115 aa12.03□□□□□ -0.48
TIMP4-201ENST00000287814 H0Y9J4 135 aa12.02□□□□□ -0.49
TIMP4-201ENST00000287814 TMEM126AQ9H061 195 aa12.02□□□□□ -0.49
TIMP4-201ENST00000287814 LINC00308Q8TCZ7 52 aa12.01□□□□□ -0.49
TIMP4-201ENST00000287814 LINC01600Q96MT4 127 aa12.01□□□□□ -0.49
TIMP4-201ENST00000287814 REG3GQ6UW15 175 aa12□□□□□ -0.49
TIMP4-201ENST00000287814 SCGB1D4Q6XE38 83 aa12□□□□□ -0.49
TIMP4-201ENST00000287814 KRTAP13-1Q8IUC0 172 aa12□□□□□ -0.49
TIMP4-201ENST00000287814 TSTD3H0UI37 97 aa12□□□□□ -0.49
TIMP4-201ENST00000287814 TRBV10-3A0A0K0K1G6 114 aa11.99□□□□□ -0.49
TIMP4-201ENST00000287814 NDUFC2O95298 119 aa11.99□□□□□ -0.49
TIMP4-201ENST00000287814 TRBV10-2A0A0K0K1G8 114 aa11.97□□□□□ -0.49
TIMP4-201ENST00000287814 RPL28P46779 137 aaKnown RBP11.97□□□□□ -0.49
TIMP4-201ENST00000287814 C14orf144Q96I85 54 aa11.97□□□□□ -0.49
TIMP4-201ENST00000287814 SPANXB1Q9NS25 103 aaPredicted RBP11.97□□□□□ -0.49
TIMP4-201ENST00000287814 UBE2AP49459 152 aa11.96□□□□□ -0.5
TIMP4-201ENST00000287814 PRLHP81277 87 aa11.96□□□□□ -0.5
TIMP4-201ENST00000287814 SPANXDQ9BXN6 97 aa11.96□□□□□ -0.5
TIMP4-201ENST00000287814 KCNQ1DNQ9H478 68 aa11.96□□□□□ -0.5
TIMP4-201ENST00000287814 SPANXCQ9NY87 97 aa11.96□□□□□ -0.5
TIMP4-201ENST00000287814 KRTAP1-4P0C5Y4 121 aa11.95□□□□□ -0.5
TIMP4-201ENST00000287814 FAM19A1Q7Z5A9 133 aa11.95□□□□□ -0.5
TIMP4-201ENST00000287814 TNXBP22105 4242 aa11.95□□□□□ -0.5
TIMP4-201ENST00000287814 DDTP30046 118 aa11.94□□□□□ -0.5
TIMP4-201ENST00000287814 PRYO14603 147 aa11.93□□□□□ -0.5
TIMP4-201ENST00000287814 SPRR1AP35321 89 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms