RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 CCKP06307 115 aa12.53□□□□□ -0.4
PDLIM3-201ENST00000284767 Q8N3U1 123 aa12.53□□□□□ -0.4
PDLIM3-201ENST00000284767 PRB2P02812 416 aaPredicted RBP12.53□□□□□ -0.4
PDLIM3-201ENST00000284767 JMJD7-PLA2G4BH0Y9G9 81 aa12.52□□□□□ -0.4
PDLIM3-201ENST00000284767 SERP2Q8N6R1 65 aa12.52□□□□□ -0.4
PDLIM3-201ENST00000284767 C11orf68Q9H3H3 251 aaKnown RBP12.52□□□□□ -0.4
PDLIM3-201ENST00000284767 A0A1B0GUV1 79 aa12.52□□□□□ -0.41
PDLIM3-201ENST00000284767 CLPSL2Q6UWE3 100 aa12.52□□□□□ -0.41
PDLIM3-201ENST00000284767 DNAH3Q8TD57 4116 aa12.52□□□□□ -0.41
PDLIM3-201ENST00000284767 J3KT08 172 aa12.51□□□□□ -0.41
PDLIM3-201ENST00000284767 S100A7L2Q5SY68 101 aa12.51□□□□□ -0.41
PDLIM3-201ENST00000284767 XCL1P47992 114 aa12.51□□□□□ -0.41
PDLIM3-201ENST00000284767 hADV29S1A0JD25 119 aa12.5□□□□□ -0.41
PDLIM3-201ENST00000284767 NDUFC2O95298 119 aa12.49□□□□□ -0.41
PDLIM3-201ENST00000284767 Q8N814 137 aa12.49□□□□□ -0.41
PDLIM3-201ENST00000284767 NANOS2P60321 138 aaKnown RBP12.48□□□□□ -0.41
PDLIM3-201ENST00000284767 A0A087WVE0 104 aa12.48□□□□□ -0.41
PDLIM3-201ENST00000284767 USP17L23D6RBM5 183 aa12.48□□□□□ -0.41
PDLIM3-201ENST00000284767 TMEM256-PLSCR3K7ERE1 68 aa12.48□□□□□ -0.41
PDLIM3-201ENST00000284767 RPS28P62857 69 aaKnown RBP12.48□□□□□ -0.41
PDLIM3-201ENST00000284767 ATP5EP2Q5VTU8 51 aa12.48□□□□□ -0.41
PDLIM3-201ENST00000284767 COX17Q14061 63 aa12.47□□□□□ -0.41
PDLIM3-201ENST00000284767 MGAM2Q2M2H8 2515 aa12.46□□□□□ -0.42
PDLIM3-201ENST00000284767 CFAP161Q6P656 301 aa12.46□□□□□ -0.42
PDLIM3-201ENST00000284767 UPK3BQ9BT76 320 aa12.46□□□□□ -0.42
PDLIM3-201ENST00000284767 TMEM258P61165 79 aa12.45□□□□□ -0.42
PDLIM3-201ENST00000284767 LOC107984640A0A0U1RRK4 108 aa12.44□□□□□ -0.42
PDLIM3-201ENST00000284767 CYSTM1Q9H1C7 97 aa12.43□□□□□ -0.42
PDLIM3-201ENST00000284767 KIAA0087Q14695 138 aa12.42□□□□□ -0.42
PDLIM3-201ENST00000284767 PRR3P79522 188 aaKnown RBP12.42□□□□□ -0.42
PDLIM3-201ENST00000284767 Q6ZTC4 211 aa12.42□□□□□ -0.42
PDLIM3-201ENST00000284767 LINC00269Q8N2A0 174 aa12.42□□□□□ -0.42
PDLIM3-201ENST00000284767 CD164L2Q6UWJ8 174 aa12.41□□□□□ -0.42
PDLIM3-201ENST00000284767 LYPD5Q6UWN5 251 aa12.41□□□□□ -0.42
PDLIM3-201ENST00000284767 A0A0J9YWU9 116 aa12.4□□□□□ -0.42
PDLIM3-201ENST00000284767 IGLV10-54A0A075B6I4 117 aa12.4□□□□□ -0.42
PDLIM3-201ENST00000284767 ANGP03950 147 aaKnown RBP12.39□□□□□ -0.43
PDLIM3-201ENST00000284767 TRBV10-3A0A0K0K1G6 114 aa12.39□□□□□ -0.43
PDLIM3-201ENST00000284767 FAM19A5Q7Z5A7 132 aaPredicted RBP12.37□□□□□ -0.43
PDLIM3-201ENST00000284767 UBL5Q9BZL1 73 aa12.37□□□□□ -0.43
PDLIM3-201ENST00000284767 C6orf99Q4VX62 202 aa12.36□□□□□ -0.43
PDLIM3-201ENST00000284767 CHCHD10Q8WYQ3 142 aaPredicted RBP12.36□□□□□ -0.43
PDLIM3-201ENST00000284767 MRAPQ8TCY5 172 aa12.36□□□□□ -0.43
PDLIM3-201ENST00000284767 DPH3Q96FX2 82 aa12.35□□□□□ -0.43
PDLIM3-201ENST00000284767 LINC00575Q6W349 94 aa12.35□□□□□ -0.43
PDLIM3-201ENST00000284767 REG3AQ06141 175 aa12.34□□□□□ -0.43
PDLIM3-201ENST00000284767 MUC7Q8TAX7 377 aa12.34□□□□□ -0.43
PDLIM3-201ENST00000284767 GHRHP01286 108 aa12.34□□□□□ -0.43
PDLIM3-201ENST00000284767 KPRPQ5T749 579 aaPredicted RBP12.34□□□□□ -0.43
PDLIM3-201ENST00000284767 LELP1Q5T871 98 aa12.34□□□□□ -0.43
PDLIM3-201ENST00000284767 ENHOQ6UWT2 76 aa12.33□□□□□ -0.44
PDLIM3-201ENST00000284767 MDFIQ99750 246 aa12.32□□□□□ -0.44
PDLIM3-201ENST00000284767 K7EIL1 84 aa12.32□□□□□ -0.44
PDLIM3-201ENST00000284767 ZNF561-AS1K7EIQ3 104 aa12.32□□□□□ -0.44
PDLIM3-201ENST00000284767 C9orf116Q5BN46 136 aaPredicted RBP12.32□□□□□ -0.44
PDLIM3-201ENST00000284767 HUWE1Q7Z6Z7 4374 aaKnown RBP12.31□□□□□ -0.44
PDLIM3-201ENST00000284767 LOC110117498A0A087WWA1 95 aa12.31□□□□□ -0.44
PDLIM3-201ENST00000284767 RBM3P98179 157 aaKnown RBP12.31□□□□□ -0.44
PDLIM3-201ENST00000284767 FAM19A1Q7Z5A9 133 aa12.31□□□□□ -0.44
PDLIM3-201ENST00000284767 TRAV23DV6A0A075B6W5 121 aa12.31□□□□□ -0.44
PDLIM3-201ENST00000284767 Q6ZQT0 140 aa12.31□□□□□ -0.44
PDLIM3-201ENST00000284767 Q8NDZ9 215 aa12.31□□□□□ -0.44
PDLIM3-201ENST00000284767 KLK12Q9UKR0 248 aa12.31□□□□□ -0.44
PDLIM3-201ENST00000284767 NDUFC2-KCTD14E9PQ53 114 aa12.3□□□□□ -0.44
PDLIM3-201ENST00000284767 WFDC10BQ8IUB3 73 aa12.29□□□□□ -0.44
PDLIM3-201ENST00000284767 C11orf45Q8TAV5 145 aa12.29□□□□□ -0.44
PDLIM3-201ENST00000284767 C6orf223Q8N319 242 aa12.29□□□□□ -0.44
PDLIM3-201ENST00000284767 DEFB131BA0A096LNP1 70 aa12.27□□□□□ -0.44
PDLIM3-201ENST00000284767 H3BQ85 93 aa12.27□□□□□ -0.44
PDLIM3-201ENST00000284767 BCE1O60756 84 aa12.27□□□□□ -0.44
PDLIM3-201ENST00000284767 C5orf47Q569G3 176 aa12.27□□□□□ -0.44
PDLIM3-201ENST00000284767 DSCR8Q96T75 97 aa12.26□□□□□ -0.45
PDLIM3-201ENST00000284767 IGLV6-57P01721 117 aa12.25□□□□□ -0.45
PDLIM3-201ENST00000284767 LAMTOR3Q9UHA4 124 aa12.25□□□□□ -0.45
PDLIM3-201ENST00000284767 ESRGQ1W209 222 aa12.25□□□□□ -0.45
PDLIM3-201ENST00000284767 SPAG11BQ08648 103 aa12.25□□□□□ -0.45
PDLIM3-201ENST00000284767 PDE6GP18545 87 aa12.24□□□□□ -0.45
PDLIM3-201ENST00000284767 UNQ6190/PRO20217Q6UXQ8 127 aa12.24□□□□□ -0.45
PDLIM3-201ENST00000284767 C10orf25Q5T742 122 aa12.23□□□□□ -0.45
PDLIM3-201ENST00000284767 COL7A1Q02388 2944 aa12.23□□□□□ -0.45
PDLIM3-201ENST00000284767 H3BNG1 76 aa12.22□□□□□ -0.45
PDLIM3-201ENST00000284767 TM2D3Q9BRN9 247 aa12.22□□□□□ -0.45
PDLIM3-201ENST00000284767 PRR34Q9NV39 138 aa12.22□□□□□ -0.45
PDLIM3-201ENST00000284767 OXTP01178 125 aa12.21□□□□□ -0.45
PDLIM3-201ENST00000284767 LINC01547P58512 204 aaPredicted RBP12.21□□□□□ -0.45
PDLIM3-201ENST00000284767 TRAV7A0A075B6U4 112 aa12.2□□□□□ -0.46
PDLIM3-201ENST00000284767 Q6ZQY7 126 aa12.2□□□□□ -0.46
PDLIM3-201ENST00000284767 Q6ZVQ6 151 aa12.2□□□□□ -0.46
PDLIM3-201ENST00000284767 C20orf197Q8N268 126 aa12.2□□□□□ -0.46
PDLIM3-201ENST00000284767 GVQW2A0A096LPI5 108 aaPredicted RBP12.19□□□□□ -0.46
PDLIM3-201ENST00000284767 STAB2Q8WWQ8 2551 aa12.19□□□□□ -0.46
PDLIM3-201ENST00000284767 CXCL6P80162 114 aa12.18□□□□□ -0.46
PDLIM3-201ENST00000284767 M0R2N4 97 aa12.18□□□□□ -0.46
PDLIM3-201ENST00000284767 HAMPP81172 84 aa12.17□□□□□ -0.46
PDLIM3-201ENST00000284767 DIRC1Q969H9 104 aa12.16□□□□□ -0.46
PDLIM3-201ENST00000284767 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.15□□□□□ -0.46
PDLIM3-201ENST00000284767 FAM236DA0A1B0GTK5 79 aa12.14□□□□□ -0.47
PDLIM3-201ENST00000284767 FAM236CP0DP71 79 aa12.14□□□□□ -0.47
PDLIM3-201ENST00000284767 DNAH9Q9NYC9 4486 aa12.13□□□□□ -0.47
PDLIM3-201ENST00000284767 TRBV7-4A0A0J9YYF1 115 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms