RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 TMEM254Q8TBM7 123 aa8.17□□□□□ -1.1
SHPRH-201ENST00000275233 IGHV3OR16-9A0A0B4J2B5 98 aa8.16□□□□□ -1.1
SHPRH-201ENST00000275233 TYMSOSQ8TAI1 123 aa8.15□□□□□ -1.11
SHPRH-201ENST00000275233 hDV103S1A0JD37 113 aa8.14□□□□□ -1.11
SHPRH-201ENST00000275233 IGLV5-39A0A0G2JS06 123 aa8.14□□□□□ -1.11
SHPRH-201ENST00000275233 FAM19A4Q96LR4 140 aa8.14□□□□□ -1.11
SHPRH-201ENST00000275233 ST20-AS1Q8NBB2 130 aa8.14□□□□□ -1.11
SHPRH-201ENST00000275233 LINC00588Q9Y4M8 146 aa8.13□□□□□ -1.11
SHPRH-201ENST00000275233 ZFYVE26Q68DK2 2539 aa8.13□□□□□ -1.11
SHPRH-201ENST00000275233 RPL37AP61513 92 aaKnown RBP8.13□□□□□ -1.11
SHPRH-201ENST00000275233 FN1P02751 2386 aaKnown RBP8.13□□□□□ -1.11
SHPRH-201ENST00000275233 NBDYA0A0U1RRE5 68 aa8.13□□□□□ -1.11
SHPRH-201ENST00000275233 FAM218AQ96MZ4 157 aa8.12□□□□□ -1.11
SHPRH-201ENST00000275233 EPM2AB3EWF7 344 aa8.12□□□□□ -1.11
SHPRH-201ENST00000275233 PIEZO1Q92508 2521 aa8.12□□□□□ -1.11
SHPRH-201ENST00000275233 MYO9AB2RTY4 2548 aa8.11□□□□□ -1.11
SHPRH-201ENST00000275233 ABCA12Q86UK0 2595 aa8.11□□□□□ -1.11
SHPRH-201ENST00000275233 CXCL6P80162 114 aa8.1□□□□□ -1.11
SHPRH-201ENST00000275233 FAM168BA1KXE4 195 aa8.1□□□□□ -1.11
SHPRH-201ENST00000275233 LINC00476Q8WZB0 136 aa8.1□□□□□ -1.11
SHPRH-201ENST00000275233 IGLV8-61A0A075B6I0 122 aa8.1□□□□□ -1.11
SHPRH-201ENST00000275233 LINC00313P59037 77 aa8.09□□□□□ -1.11
SHPRH-201ENST00000275233 Q8NAQ8 132 aa8.09□□□□□ -1.11
SHPRH-201ENST00000275233 A0A1B0GU69 56 aa8.08□□□□□ -1.12
SHPRH-201ENST00000275233 PLA2G1BP04054 148 aaKnown RBP8.08□□□□□ -1.12
SHPRH-201ENST00000275233 TLN1Q9Y490 2541 aaKnown RBP8.08□□□□□ -1.12
SHPRH-201ENST00000275233 Q96NJ1 140 aa8.08□□□□□ -1.12
SHPRH-201ENST00000275233 ELOF1P60002 83 aaKnown RBP8.08□□□□□ -1.12
SHPRH-201ENST00000275233 Q6ZRP5 223 aa8.08□□□□□ -1.12
SHPRH-201ENST00000275233 LINC01546A6NGU7 62 aa8.07□□□□□ -1.12
SHPRH-201ENST00000275233 SPAG11AQ6PDA7 123 aa8.06□□□□□ -1.12
SHPRH-201ENST00000275233 J3QL48 77 aa8.06□□□□□ -1.12
SHPRH-201ENST00000275233 TLN2Q9Y4G6 2542 aa8.06□□□□□ -1.12
SHPRH-201ENST00000275233 Q6ZRX8 168 aa8.06□□□□□ -1.12
SHPRH-201ENST00000275233 H3BNG1 76 aa8.05□□□□□ -1.12
SHPRH-201ENST00000275233 Q8NBF4 154 aa8.04□□□□□ -1.12
SHPRH-201ENST00000275233 PCSK5Q92824 1860 aa8.04□□□□□ -1.12
SHPRH-201ENST00000275233 CDIP1Q9H305 208 aa8.04□□□□□ -1.12
SHPRH-201ENST00000275233 ACYP2P14621 99 aa8.04□□□□□ -1.12
SHPRH-201ENST00000275233 WWC2-AS2Q96NR7 200 aa8.03□□□□□ -1.12
SHPRH-201ENST00000275233 DNAH10OSP0CZ25 163 aa8.02□□□□□ -1.13
SHPRH-201ENST00000275233 Q6ZQT0 140 aa8.01□□□□□ -1.13
SHPRH-201ENST00000275233 TP53AIP1Q9HCN2 124 aa8.01□□□□□ -1.13
SHPRH-201ENST00000275233 BCE1O60756 84 aa8.01□□□□□ -1.13
SHPRH-201ENST00000275233 SMCPP49901 116 aaPredicted RBP8.01□□□□□ -1.13
SHPRH-201ENST00000275233 KRTAP10-11P60412 298 aa8.01□□□□□ -1.13
SHPRH-201ENST00000275233 IGLV5-45A0A087WSX0 123 aa8.01□□□□□ -1.13
SHPRH-201ENST00000275233 ATP11AUNQ6ZP68 121 aa7.99□□□□□ -1.13
SHPRH-201ENST00000275233 SERTAD4-AS1Q5TG53 156 aa7.99□□□□□ -1.13
SHPRH-201ENST00000275233 GVQW2A0A096LPI5 108 aaPredicted RBP7.98□□□□□ -1.13
SHPRH-201ENST00000275233 SMR3BP02814 79 aaPredicted RBP7.97□□□□□ -1.13
SHPRH-201ENST00000275233 C9orf92A6NGG3 77 aa7.96□□□□□ -1.13
SHPRH-201ENST00000275233 TM2D3Q9BRN9 247 aa7.96□□□□□ -1.14
SHPRH-201ENST00000275233 USP9XQ93008 2570 aaPredicted RBP7.96□□□□□ -1.14
SHPRH-201ENST00000275233 SETD2Q9BYW2 2564 aaPredicted RBP7.96□□□□□ -1.14
SHPRH-201ENST00000275233 ANKRD11Q6UB99 2663 aaPredicted RBP7.95□□□□□ -1.14
SHPRH-201ENST00000275233 K7EIL1 84 aa7.95□□□□□ -1.14
SHPRH-201ENST00000275233 COX6B2Q6YFQ2 88 aa7.94□□□□□ -1.14
SHPRH-201ENST00000275233 TRAV22A0A0B4J277 110 aa7.94□□□□□ -1.14
SHPRH-201ENST00000275233 DSCR10P59022 87 aa7.93□□□□□ -1.14
SHPRH-201ENST00000275233 VPREB1P12018 145 aa7.92□□□□□ -1.14
SHPRH-201ENST00000275233 KRTAP10-3P60369 221 aa7.92□□□□□ -1.14
SHPRH-201ENST00000275233 LOC110117498A0A087WWA1 95 aa7.92□□□□□ -1.14
SHPRH-201ENST00000275233 C4orf26Q17RF5 130 aa7.92□□□□□ -1.14
SHPRH-201ENST00000275233 A0A0G2JQZ4 141 aa7.92□□□□□ -1.14
SHPRH-201ENST00000275233 A0A1W2PNN7 141 aa7.92□□□□□ -1.14
SHPRH-201ENST00000275233 K7EQZ3 153 aa7.91□□□□□ -1.14
SHPRH-201ENST00000275233 TRBV7-4A0A0J9YYF1 115 aa7.91□□□□□ -1.14
SHPRH-201ENST00000275233 ANKRD17O75179 2603 aaKnown RBP7.91□□□□□ -1.14
SHPRH-201ENST00000275233 ANAPC11Q9NYG5 84 aa7.9□□□□□ -1.14
SHPRH-201ENST00000275233 ZNF462Q96JM2 2506 aa7.89□□□□□ -1.15
SHPRH-201ENST00000275233 CSNK1G2-AS1Q8NCQ2 148 aa7.89□□□□□ -1.15
SHPRH-201ENST00000275233 IGLV1-50A0A075B6I6 118 aa7.88□□□□□ -1.15
SHPRH-201ENST00000275233 IGLV6-57P01721 117 aa7.88□□□□□ -1.15
SHPRH-201ENST00000275233 PRO0461Q9UI25 63 aa7.88□□□□□ -1.15
SHPRH-201ENST00000275233 OBSCN-AS1Q96MR7 158 aa7.88□□□□□ -1.15
SHPRH-201ENST00000275233 A8MWP4 228 aa7.87□□□□□ -1.15
SHPRH-201ENST00000275233 LITAFQ99732 161 aa7.86□□□□□ -1.15
SHPRH-201ENST00000275233 MRPL34Q9BQ48 92 aaKnown RBP7.86□□□□□ -1.15
SHPRH-201ENST00000275233 UTRNP46939 3433 aa7.86□□□□□ -1.15
SHPRH-201ENST00000275233 SPTBN4Q9H254 2564 aa7.86□□□□□ -1.15
SHPRH-201ENST00000275233 C15orf56Q8N910 161 aa7.85□□□□□ -1.15
SHPRH-201ENST00000275233 LINC00304Q8N9R0 145 aa7.85□□□□□ -1.15
SHPRH-201ENST00000275233 SPINT4Q6UDR6 99 aa7.84□□□□□ -1.15
SHPRH-201ENST00000275233 PKD1L2Q7Z442 2459 aa7.84□□□□□ -1.15
SHPRH-201ENST00000275233 CEP295Q9C0D2 2601 aa7.84□□□□□ -1.15
SHPRH-201ENST00000275233 IGFL1Q6UW32 110 aa7.84□□□□□ -1.15
SHPRH-201ENST00000275233 A0A1B0GW54 56 aa7.84□□□□□ -1.15
SHPRH-201ENST00000275233 CHD8Q9HCK8 2581 aa7.84□□□□□ -1.15
SHPRH-201ENST00000275233 APLNQ9ULZ1 77 aa7.84□□□□□ -1.15
SHPRH-201ENST00000275233 DNAH12Q6ZR08 3092 aa7.83□□□□□ -1.16
SHPRH-201ENST00000275233 C9orf129Q5T035 196 aaKnown RBP7.83□□□□□ -1.16
SHPRH-201ENST00000275233 USP9YO00507 2555 aaPredicted RBP7.82□□□□□ -1.16
SHPRH-201ENST00000275233 C8orf87E5RJ46 101 aa7.82□□□□□ -1.16
SHPRH-201ENST00000275233 H3BPC8 53 aa7.82□□□□□ -1.16
SHPRH-201ENST00000275233 A0A087WTM6 91 aa7.82□□□□□ -1.16
SHPRH-201ENST00000275233 EIF4EBP3O60516 100 aaPredicted RBP7.82□□□□□ -1.16
SHPRH-201ENST00000275233 C19orf73Q9NVV2 129 aa7.81□□□□□ -1.16
SHPRH-201ENST00000275233 POLQO75417 2590 aa7.81□□□□□ -1.16
SHPRH-201ENST00000275233 LOC101927531A0A1B0GV80 90 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms