RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 A8MTW9 85 aa10.85□□□□□ -0.67
CTDSP1-201ENST00000273062 Q6ZRU5 148 aa10.85□□□□□ -0.67
CTDSP1-201ENST00000273062 Q6ZTC4 211 aa10.85□□□□□ -0.67
CTDSP1-201ENST00000273062 HECTD1Q9ULT8 2610 aa10.84□□□□□ -0.67
CTDSP1-201ENST00000273062 GCN1Q92616 2671 aaKnown RBP10.84□□□□□ -0.67
CTDSP1-201ENST00000273062 Q8N9L7 120 aa10.83□□□□□ -0.68
CTDSP1-201ENST00000273062 NOTCH3Q9UM47 2321 aa10.82□□□□□ -0.68
CTDSP1-201ENST00000273062 A8MU10 97 aa10.82□□□□□ -0.68
CTDSP1-201ENST00000273062 J3QKU1 62 aa10.82□□□□□ -0.68
CTDSP1-201ENST00000273062 LAMTOR3Q9UHA4 124 aa10.82□□□□□ -0.68
CTDSP1-201ENST00000273062 BPY2O14599 106 aa10.81□□□□□ -0.68
CTDSP1-201ENST00000273062 FUSP35637 526 aaKnown RBP eCLIP10.81□□□□□ -0.689e-7■□□□□ 9.5
CTDSP1-201ENST00000273062 DYNLRB2Q8TF09 96 aa10.81□□□□□ -0.68
CTDSP1-201ENST00000273062 CXCL6P80162 114 aa10.81□□□□□ -0.68
CTDSP1-201ENST00000273062 C6orf223Q8N319 242 aa10.81□□□□□ -0.68
CTDSP1-201ENST00000273062 PRYO14603 147 aa10.8□□□□□ -0.68
CTDSP1-201ENST00000273062 Q6ZRP5 223 aa10.8□□□□□ -0.68
CTDSP1-201ENST00000273062 SMR3AQ99954 134 aa10.8□□□□□ -0.68
CTDSP1-201ENST00000273062 MAP6D1Q9H9H5 199 aa10.8□□□□□ -0.68
CTDSP1-201ENST00000273062 LOC110117498A0A087WWA1 95 aa10.8□□□□□ -0.68
CTDSP1-201ENST00000273062 DEFB114Q30KQ6 69 aa10.8□□□□□ -0.68
CTDSP1-201ENST00000273062 C6orf99Q4VX62 202 aa10.8□□□□□ -0.68
CTDSP1-201ENST00000273062 JMJD1CQ15652 2540 aa10.79□□□□□ -0.68
CTDSP1-201ENST00000273062 DAD1P61803 113 aa10.79□□□□□ -0.68
CTDSP1-201ENST00000273062 HIGD2AQ9BW72 106 aa10.79□□□□□ -0.68
CTDSP1-201ENST00000273062 NOTCH2Q04721 2471 aa10.79□□□□□ -0.68
CTDSP1-201ENST00000273062 PSPHP1O15172 72 aa10.78□□□□□ -0.68
CTDSP1-201ENST00000273062 IGHV3OR16-9A0A0B4J2B5 98 aa10.78□□□□□ -0.68
CTDSP1-201ENST00000273062 SETXQ7Z333 2677 aaKnown RBP10.78□□□□□ -0.68
CTDSP1-201ENST00000273062 IGLV4-60A0A075B6I1 120 aa10.77□□□□□ -0.68
CTDSP1-201ENST00000273062 Q8NDZ9 215 aa10.77□□□□□ -0.68
CTDSP1-201ENST00000273062 UBE2L6O14933 153 aa10.76□□□□□ -0.69
CTDSP1-201ENST00000273062 C1orf158Q8N1D5 194 aa10.76□□□□□ -0.69
CTDSP1-201ENST00000273062 ZNF561-AS1K7EIQ3 104 aa10.75□□□□□ -0.69
CTDSP1-201ENST00000273062 LINC01006Q8NI28 216 aa10.75□□□□□ -0.69
CTDSP1-201ENST00000273062 CCL24O00175 119 aa10.75□□□□□ -0.69
CTDSP1-201ENST00000273062 CD164L2Q6UWJ8 174 aa10.75□□□□□ -0.69
CTDSP1-201ENST00000273062 CD164Q04900 197 aa10.74□□□□□ -0.69
CTDSP1-201ENST00000273062 ODF3L2Q3SX64 289 aa10.74□□□□□ -0.69
CTDSP1-201ENST00000273062 TRGV1A0A0A0MS02 117 aa10.74□□□□□ -0.69
CTDSP1-201ENST00000273062 LOC100131303A0A0U1RQF7 123 aa10.74□□□□□ -0.69
CTDSP1-201ENST00000273062 LINC00575Q6W349 94 aa10.74□□□□□ -0.69
CTDSP1-201ENST00000273062 OCR1Q9BZK8 76 aa10.73□□□□□ -0.69
CTDSP1-201ENST00000273062 hDV103S1A0JD37 113 aa10.72□□□□□ -0.69
CTDSP1-201ENST00000273062 MUC7Q8TAX7 377 aa10.72□□□□□ -0.69
CTDSP1-201ENST00000273062 WFDC10AQ9H1F0 79 aa10.71□□□□□ -0.7
CTDSP1-201ENST00000273062 HIVEP2P31629 2446 aa10.7□□□□□ -0.7
CTDSP1-201ENST00000273062 ERC2-IT1O76042 136 aa10.7□□□□□ -0.7
CTDSP1-201ENST00000273062 Q6ZQY7 126 aa10.7□□□□□ -0.7
CTDSP1-201ENST00000273062 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.7□□□□□ -0.7
CTDSP1-201ENST00000273062 OTOGQ6ZRI0 2925 aa10.69□□□□□ -0.7
CTDSP1-201ENST00000273062 C1orf64Q8NEQ6 169 aa10.69□□□□□ -0.7
CTDSP1-201ENST00000273062 C9orf116Q5BN46 136 aaPredicted RBP10.68□□□□□ -0.7
CTDSP1-201ENST00000273062 C9orf66Q5T8R8 295 aa10.68□□□□□ -0.7
CTDSP1-201ENST00000273062 Q1T7F1 81 aa10.68□□□□□ -0.7
CTDSP1-201ENST00000273062 INSP01308 110 aa10.67□□□□□ -0.7
CTDSP1-201ENST00000273062 TRAV22A0A0B4J277 110 aa10.67□□□□□ -0.7
CTDSP1-201ENST00000273062 IGKV4-1P06312 121 aa10.67□□□□□ -0.7
CTDSP1-201ENST00000273062 STHQ8IWL8 128 aa10.66□□□□□ -0.7
CTDSP1-201ENST00000273062 PRB2P02812 416 aaPredicted RBP10.66□□□□□ -0.7
CTDSP1-201ENST00000273062 LINC00612Q8N6U2 182 aa10.65□□□□□ -0.7
CTDSP1-201ENST00000273062 CELA1Q9UNI1 258 aa10.64□□□□□ -0.71
CTDSP1-201ENST00000273062 KRTAP10-3P60369 221 aa10.64□□□□□ -0.71
CTDSP1-201ENST00000273062 C10orf25Q5T742 122 aa10.63□□□□□ -0.71
CTDSP1-201ENST00000273062 CLPSL2Q6UWE3 100 aa10.63□□□□□ -0.71
CTDSP1-201ENST00000273062 PRR4Q16378 134 aa10.62□□□□□ -0.71
CTDSP1-201ENST00000273062 TRGV2A0A075B6R0 118 aa10.61□□□□□ -0.71
CTDSP1-201ENST00000273062 LINC00959A0A1B0GUT2 108 aa10.61□□□□□ -0.71
CTDSP1-201ENST00000273062 A8MUN3 132 aa10.61□□□□□ -0.71
CTDSP1-201ENST00000273062 FAM30AQ9NZY2 134 aa10.61□□□□□ -0.71
CTDSP1-201ENST00000273062 VWFP04275 2813 aa10.61□□□□□ -0.71
CTDSP1-201ENST00000273062 GIG44P09565 113 aaPredicted RBP10.61□□□□□ -0.71
CTDSP1-201ENST00000273062 RBM12B-AS1Q9P1G2 102 aa10.61□□□□□ -0.71
CTDSP1-201ENST00000273062 FN1P02751 2386 aaKnown RBP10.61□□□□□ -0.71
CTDSP1-201ENST00000273062 MRPL55Q7Z7F7 128 aaKnown RBP10.58□□□□□ -0.72
CTDSP1-201ENST00000273062 IGLV1-51P01701 117 aa10.58□□□□□ -0.72
CTDSP1-201ENST00000273062 PDE6GP18545 87 aa10.58□□□□□ -0.72
CTDSP1-201ENST00000273062 SYCNQ0VAF6 134 aa10.58□□□□□ -0.72
CTDSP1-201ENST00000273062 C19orf73Q9NVV2 129 aa10.58□□□□□ -0.72
CTDSP1-201ENST00000273062 TENM1Q9UKZ4 2725 aa10.57□□□□□ -0.72
CTDSP1-201ENST00000273062 NOP10Q9NPE3 64 aaKnown RBP10.57□□□□□ -0.72
CTDSP1-201ENST00000273062 NSD1Q96L73 2696 aaPredicted RBP10.57□□□□□ -0.72
CTDSP1-201ENST00000273062 Q8IZM0 81 aa10.57□□□□□ -0.72
CTDSP1-201ENST00000273062 INAFM1C9JVW0 142 aa10.56□□□□□ -0.72
CTDSP1-201ENST00000273062 SMIM29Q86T20 159 aa10.56□□□□□ -0.72
CTDSP1-201ENST00000273062 LINC00269Q8N2A0 174 aa10.56□□□□□ -0.72
CTDSP1-201ENST00000273062 TRGV4A0A0C4DH28 118 aa10.55□□□□□ -0.72
CTDSP1-201ENST00000273062 TRBV6-8A0A0A6YYG3 113 aa10.55□□□□□ -0.72
CTDSP1-201ENST00000273062 KLK12Q9UKR0 248 aa10.54□□□□□ -0.72
CTDSP1-201ENST00000273062 HIVEP1P15822 2718 aa10.54□□□□□ -0.72
CTDSP1-201ENST00000273062 KIAA0087Q14695 138 aa10.53□□□□□ -0.72
CTDSP1-201ENST00000273062 C3orf84H3BNL1 204 aa10.53□□□□□ -0.72
CTDSP1-201ENST00000273062 Q5VV11 94 aa10.52□□□□□ -0.73
CTDSP1-201ENST00000273062 LINC00588Q9Y4M8 146 aa10.52□□□□□ -0.73
CTDSP1-201ENST00000273062 NBEAL2Q6ZNJ1 2754 aa10.51□□□□□ -0.73
CTDSP1-201ENST00000273062 PSCAO43653 123 aa10.51□□□□□ -0.73
CTDSP1-201ENST00000273062 KTN1-AS1Q86SY8 53 aa10.51□□□□□ -0.73
CTDSP1-201ENST00000273062 TRRAPQ9Y4A5 3859 aa10.51□□□□□ -0.73
CTDSP1-201ENST00000273062 CSNK1G2-AS1Q8NCQ2 148 aa10.51□□□□□ -0.73
CTDSP1-201ENST00000273062 COX7BP24311 80 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms