RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 CDC42SE1Q9NRR8 79 aa11.15□□□□□ -0.62
UBR3-201ENST00000272793 LYPD5Q6UWN5 251 aa11.15□□□□□ -0.62
UBR3-201ENST00000272793 COA5Q86WW8 74 aa11.15□□□□□ -0.62
UBR3-201ENST00000272793 WIPF1O43516 503 aa11.15□□□□□ -0.62
UBR3-201ENST00000272793 RPS28P62857 69 aaKnown RBP11.15□□□□□ -0.62
UBR3-201ENST00000272793 CD164Q04900 197 aa11.15□□□□□ -0.63
UBR3-201ENST00000272793 Q6ZRU5 148 aa11.15□□□□□ -0.63
UBR3-201ENST00000272793 F8WDY8 70 aa11.14□□□□□ -0.63
UBR3-201ENST00000272793 J3QL48 77 aa11.14□□□□□ -0.63
UBR3-201ENST00000272793 KLLNB2CW77 178 aa11.14□□□□□ -0.63
UBR3-201ENST00000272793 Q6ZQT0 140 aa11.14□□□□□ -0.63
UBR3-201ENST00000272793 ANKRD17O75179 2603 aaKnown RBP11.13□□□□□ -0.63
UBR3-201ENST00000272793 PSMG3-AS1Q96PY0 264 aa11.13□□□□□ -0.63
UBR3-201ENST00000272793 LINC01006Q8NI28 216 aa11.13□□□□□ -0.63
UBR3-201ENST00000272793 EIF4EBP1Q13541 118 aaPredicted RBP11.13□□□□□ -0.63
UBR3-201ENST00000272793 TM2D3Q9BRN9 247 aa11.12□□□□□ -0.63
UBR3-201ENST00000272793 A8MUN3 132 aa11.12□□□□□ -0.63
UBR3-201ENST00000272793 H3BPC8 53 aa11.12□□□□□ -0.63
UBR3-201ENST00000272793 MTORP42345 2549 aa11.12□□□□□ -0.63
UBR3-201ENST00000272793 CYP4F30PQ9H0H9 118 aa11.1□□□□□ -0.63
UBR3-201ENST00000272793 LINC00483Q53H64 154 aa11.1□□□□□ -0.63
UBR3-201ENST00000272793 CHCHD7Q9BUK0 85 aa11.09□□□□□ -0.63
UBR3-201ENST00000272793 LINC00310P59036 64 aa11.09□□□□□ -0.63
UBR3-201ENST00000272793 CDIP1Q9H305 208 aa11.08□□□□□ -0.64
UBR3-201ENST00000272793 URB1-AS1Q96HZ7 61 aa11.08□□□□□ -0.64
UBR3-201ENST00000272793 LCA10Q71F78 164 aa11.07□□□□□ -0.64
UBR3-201ENST00000272793 LINC00476Q8WZB0 136 aa11.06□□□□□ -0.64
UBR3-201ENST00000272793 SETD2Q9BYW2 2564 aaPredicted RBP11.06□□□□□ -0.64
UBR3-201ENST00000272793 LINC00574Q9H8X3 128 aa11.06□□□□□ -0.64
UBR3-201ENST00000272793 PRO3102Q9H379 93 aa11.05□□□□□ -0.64
UBR3-201ENST00000272793 ABCA12Q86UK0 2595 aa11.05□□□□□ -0.64
UBR3-201ENST00000272793 USP9XQ93008 2570 aaPredicted RBP11.05□□□□□ -0.64
UBR3-201ENST00000272793 ZNF575Q86XF7 245 aa11.04□□□□□ -0.64
UBR3-201ENST00000272793 LINC01561Q8N1V8 128 aa11.04□□□□□ -0.64
UBR3-201ENST00000272793 NCOR2Q9Y618 2525 aa11.04□□□□□ -0.64
UBR3-201ENST00000272793 K7EQZ3 153 aa11.04□□□□□ -0.64
UBR3-201ENST00000272793 C16orf90A8MZG2 172 aa11.03□□□□□ -0.64
UBR3-201ENST00000272793 Q8NA96 180 aa11.03□□□□□ -0.64
UBR3-201ENST00000272793 COL4A3Q01955 1670 aa11.02□□□□□ -0.64
UBR3-201ENST00000272793 PHF5AQ7RTV0 110 aaKnown RBP11.02□□□□□ -0.65
UBR3-201ENST00000272793 A0A1W2PNU3 283 aaPredicted RBP11.02□□□□□ -0.65
UBR3-201ENST00000272793 LOC101927531A0A1B0GV80 90 aa11.02□□□□□ -0.65
UBR3-201ENST00000272793 A0A1B0GUV1 79 aa11.01□□□□□ -0.65
UBR3-201ENST00000272793 C11orf71Q6IPW1 123 aa11.01□□□□□ -0.65
UBR3-201ENST00000272793 C9orf92A6NGG3 77 aa11□□□□□ -0.65
UBR3-201ENST00000272793 CRIP3Q6Q6R5 217 aa11□□□□□ -0.65
UBR3-201ENST00000272793 SMR3AQ99954 134 aa11□□□□□ -0.65
UBR3-201ENST00000272793 C11orf72Q8NBR9 251 aa11□□□□□ -0.65
UBR3-201ENST00000272793 LINC00167Q96N53 147 aa11□□□□□ -0.65
UBR3-201ENST00000272793 CNFNQ9BYD5 112 aa10.99□□□□□ -0.65
UBR3-201ENST00000272793 Q8NBF4 154 aa10.98□□□□□ -0.65
UBR3-201ENST00000272793 TRBV7-4A0A0J9YYF1 115 aa10.98□□□□□ -0.65
UBR3-201ENST00000272793 JMJD1CQ15652 2540 aa10.98□□□□□ -0.65
UBR3-201ENST00000272793 Q6ZSN1 163 aa10.98□□□□□ -0.65
UBR3-201ENST00000272793 AMELXQ99217 191 aa10.98□□□□□ -0.65
UBR3-201ENST00000272793 FBXL19-AS1Q494R0 122 aa10.97□□□□□ -0.65
UBR3-201ENST00000272793 COL4A4P53420 1690 aaPredicted RBP10.97□□□□□ -0.65
UBR3-201ENST00000272793 RBM12B-AS1Q9P1G2 102 aa10.96□□□□□ -0.65
UBR3-201ENST00000272793 ELOF1P60002 83 aaKnown RBP10.96□□□□□ -0.65
UBR3-201ENST00000272793 LTBP2Q14767 1821 aa10.96□□□□□ -0.65
UBR3-201ENST00000272793 USP24Q9UPU5 2620 aa10.96□□□□□ -0.65
UBR3-201ENST00000272793 A0A0A0MQY5 61 aa10.96□□□□□ -0.66
UBR3-201ENST00000272793 IGLV5-37A0A075B6J1 123 aa10.96□□□□□ -0.66
UBR3-201ENST00000272793 H3BS24 57 aa10.95□□□□□ -0.66
UBR3-201ENST00000272793 BCE1O60756 84 aa10.94□□□□□ -0.66
UBR3-201ENST00000272793 Q6ZRP5 223 aa10.94□□□□□ -0.66
UBR3-201ENST00000272793 IGLV5-48A0A075B6I7 105 aa10.93□□□□□ -0.66
UBR3-201ENST00000272793 IGLV5-39A0A0G2JS06 123 aa10.93□□□□□ -0.66
UBR3-201ENST00000272793 PRRC2CQ9Y520 2896 aaKnown RBP10.93□□□□□ -0.66
UBR3-201ENST00000272793 EPG5Q9HCE0 2579 aa10.92□□□□□ -0.66
UBR3-201ENST00000272793 A8MWP4 228 aa10.92□□□□□ -0.66
UBR3-201ENST00000272793 OBSCN-AS1Q96MR7 158 aa10.92□□□□□ -0.66
UBR3-201ENST00000272793 MRPL34Q9BQ48 92 aaKnown RBP10.92□□□□□ -0.66
UBR3-201ENST00000272793 KIF25-AS1Q9Y6Z4 181 aa10.9□□□□□ -0.66
UBR3-201ENST00000272793 NHLRC4P0CG21 123 aaPredicted RBP10.89□□□□□ -0.67
UBR3-201ENST00000272793 IGLV5-45A0A087WSX0 123 aa10.89□□□□□ -0.67
UBR3-201ENST00000272793 A0A096LNJ9 63 aa10.89□□□□□ -0.67
UBR3-201ENST00000272793 A0A1B0GW54 56 aa10.88□□□□□ -0.67
UBR3-201ENST00000272793 ST20-AS1Q8NBB2 130 aa10.88□□□□□ -0.67
UBR3-201ENST00000272793 DSCR10P59022 87 aa10.88□□□□□ -0.67
UBR3-201ENST00000272793 ODF3L2Q3SX64 289 aa10.88□□□□□ -0.67
UBR3-201ENST00000272793 IGLV1-40P01703 118 aa10.88□□□□□ -0.67
UBR3-201ENST00000272793 RTL8CO15255 209 aa10.88□□□□□ -0.67
UBR3-201ENST00000272793 CAMK2N1Q7Z7J9 78 aa10.87□□□□□ -0.67
UBR3-201ENST00000272793 NAV2Q8IVL1 2488 aa10.87□□□□□ -0.67
UBR3-201ENST00000272793 FHL3Q13643 280 aa10.85□□□□□ -0.67
UBR3-201ENST00000272793 SMCPP49901 116 aaPredicted RBP10.84□□□□□ -0.67
UBR3-201ENST00000272793 Q6ZRX8 168 aa10.84□□□□□ -0.67
UBR3-201ENST00000272793 FAM218AQ96MZ4 157 aa10.83□□□□□ -0.68
UBR3-201ENST00000272793 IGLV1-51P01701 117 aa10.83□□□□□ -0.68
UBR3-201ENST00000272793 LOC110117498A0A087WWA1 95 aa10.83□□□□□ -0.68
UBR3-201ENST00000272793 Q1T7F1 81 aa10.83□□□□□ -0.68
UBR3-201ENST00000272793 LINC00336Q6ZUF6 198 aa10.81□□□□□ -0.68
UBR3-201ENST00000272793 LINC00588Q9Y4M8 146 aa10.78□□□□□ -0.68
UBR3-201ENST00000272793 TLX1NBP0CAT3 122 aa10.77□□□□□ -0.69
UBR3-201ENST00000272793 AVPP01185 164 aa10.76□□□□□ -0.69
UBR3-201ENST00000272793 CENPFP49454 3210 aa10.76□□□□□ -0.69
UBR3-201ENST00000272793 PRR15Q8IV56 129 aa10.76□□□□□ -0.69
UBR3-201ENST00000272793 PSORS1C2Q9UIG4 136 aa10.76□□□□□ -0.69
UBR3-201ENST00000272793 M0R2T5 61 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms