RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 Q6ZQT0 140 aa8.32□□□□□ -1.08
SMG6-201ENST00000263073 ST20-AS1Q8NBB2 130 aa8.32□□□□□ -1.08
SMG6-201ENST00000263073 FAM19A4Q96LR4 140 aa8.32□□□□□ -1.08
SMG6-201ENST00000263073 LINC00167Q96N53 147 aa8.32□□□□□ -1.08
SMG6-201ENST00000263073 DOPEY1Q5JWR5 2465 aa8.31□□□□□ -1.08
SMG6-201ENST00000263073 A0A1B0GU69 56 aa8.31□□□□□ -1.08
SMG6-201ENST00000263073 NUPR2A6NF83 97 aa8.31□□□□□ -1.08
SMG6-201ENST00000263073 LAMA2P24043 3122 aaKnown RBP8.3□□□□□ -1.08
SMG6-201ENST00000263073 NHLRC4P0CG21 123 aaPredicted RBP8.3□□□□□ -1.08
SMG6-201ENST00000263073 SERTAD4-AS1Q5TG53 156 aa8.3□□□□□ -1.08
SMG6-201ENST00000263073 LIMD2Q9BT23 127 aa8.29□□□□□ -1.08
SMG6-201ENST00000263073 MOBPQ13875 183 aa8.29□□□□□ -1.08
SMG6-201ENST00000263073 CHTF8P0CG12 524 aa8.28□□□□□ -1.08
SMG6-201ENST00000263073 COL4A2P08572 1712 aa8.28□□□□□ -1.08
SMG6-201ENST00000263073 CHD7Q9P2D1 2997 aa8.28□□□□□ -1.08
SMG6-201ENST00000263073 MKI67P46013 3256 aaKnown RBP8.28□□□□□ -1.08
SMG6-201ENST00000263073 SPACA4Q8TDM5 124 aa8.27□□□□□ -1.09
SMG6-201ENST00000263073 MYO9AB2RTY4 2548 aa8.27□□□□□ -1.09
SMG6-201ENST00000263073 ELOF1P60002 83 aaKnown RBP8.26□□□□□ -1.09
SMG6-201ENST00000263073 PHF5AQ7RTV0 110 aaKnown RBP8.26□□□□□ -1.09
SMG6-201ENST00000263073 LINC01561Q8N1V8 128 aa8.26□□□□□ -1.09
SMG6-201ENST00000263073 C16orf95Q9H693 158 aa8.26□□□□□ -1.09
SMG6-201ENST00000263073 EIF4EBP3O60516 100 aaPredicted RBP8.26□□□□□ -1.09
SMG6-201ENST00000263073 LINC00476Q8WZB0 136 aa8.26□□□□□ -1.09
SMG6-201ENST00000263073 IGLV5-45A0A087WSX0 123 aa8.25□□□□□ -1.09
SMG6-201ENST00000263073 LITAFQ99732 161 aa8.25□□□□□ -1.09
SMG6-201ENST00000263073 FN1P02751 2386 aaKnown RBP8.25□□□□□ -1.09
SMG6-201ENST00000263073 NCOR2Q9Y618 2525 aa8.24□□□□□ -1.09
SMG6-201ENST00000263073 RPS28P62857 69 aaKnown RBP8.24□□□□□ -1.09
SMG6-201ENST00000263073 FAM168BA1KXE4 195 aa8.22□□□□□ -1.09
SMG6-201ENST00000263073 A8MUN3 132 aa8.22□□□□□ -1.09
SMG6-201ENST00000263073 COL27A1Q8IZC6 1860 aaPredicted RBP8.21□□□□□ -1.09
SMG6-201ENST00000263073 C1orf134Q5TEV5 83 aa8.21□□□□□ -1.09
SMG6-201ENST00000263073 ATP11AUNQ6ZP68 121 aa8.21□□□□□ -1.09
SMG6-201ENST00000263073 RANBP2P49792 3224 aaKnown RBP8.21□□□□□ -1.09
SMG6-201ENST00000263073 CHD9Q3L8U1 2897 aa8.2□□□□□ -1.1
SMG6-201ENST00000263073 LOC110117498A0A087WWA1 95 aa8.2□□□□□ -1.1
SMG6-201ENST00000263073 ACYP2P14621 99 aa8.2□□□□□ -1.1
SMG6-201ENST00000263073 K7EQZ3 153 aa8.19□□□□□ -1.1
SMG6-201ENST00000263073 F8WDY8 70 aa8.19□□□□□ -1.1
SMG6-201ENST00000263073 Q6ZRX8 168 aa8.19□□□□□ -1.1
SMG6-201ENST00000263073 A0A0G2JQZ4 141 aa8.18□□□□□ -1.1
SMG6-201ENST00000263073 A0A1W2PNN7 141 aa8.18□□□□□ -1.1
SMG6-201ENST00000263073 Q8NBF4 154 aa8.18□□□□□ -1.1
SMG6-201ENST00000263073 EPM2AB3EWF7 344 aa8.17□□□□□ -1.1
SMG6-201ENST00000263073 TRBV7-4A0A0J9YYF1 115 aa8.17□□□□□ -1.1
SMG6-201ENST00000263073 LAMA3Q16787 3333 aa8.17□□□□□ -1.1
SMG6-201ENST00000263073 C5orf42Q9H799 3197 aa8.17□□□□□ -1.1
SMG6-201ENST00000263073 Q6ZRP5 223 aa8.17□□□□□ -1.1
SMG6-201ENST00000263073 MDFIQ99750 246 aa8.16□□□□□ -1.1
SMG6-201ENST00000263073 TRAV22A0A0B4J277 110 aa8.15□□□□□ -1.1
SMG6-201ENST00000263073 SETD2Q9BYW2 2564 aaPredicted RBP8.15□□□□□ -1.1
SMG6-201ENST00000263073 TLN1Q9Y490 2541 aaKnown RBP8.14□□□□□ -1.11
SMG6-201ENST00000263073 SPINT4Q6UDR6 99 aa8.14□□□□□ -1.11
SMG6-201ENST00000263073 TLN2Q9Y4G6 2542 aa8.14□□□□□ -1.11
SMG6-201ENST00000263073 TP53AIP1Q9HCN2 124 aa8.13□□□□□ -1.11
SMG6-201ENST00000263073 JMJD1CQ15652 2540 aa8.13□□□□□ -1.11
SMG6-201ENST00000263073 PLA2G1BP04054 148 aaKnown RBP8.13□□□□□ -1.11
SMG6-201ENST00000263073 BCE1O60756 84 aa8.12□□□□□ -1.11
SMG6-201ENST00000263073 LINC00336Q6ZUF6 198 aa8.12□□□□□ -1.11
SMG6-201ENST00000263073 C9orf129Q5T035 196 aaKnown RBP8.12□□□□□ -1.11
SMG6-201ENST00000263073 ABCA12Q86UK0 2595 aa8.12□□□□□ -1.11
SMG6-201ENST00000263073 COA5Q86WW8 74 aa8.12□□□□□ -1.11
SMG6-201ENST00000263073 C8orf87E5RJ46 101 aa8.11□□□□□ -1.11
SMG6-201ENST00000263073 LINC00313P59037 77 aa8.11□□□□□ -1.11
SMG6-201ENST00000263073 TRANK1O15050 2925 aa8.09□□□□□ -1.11
SMG6-201ENST00000263073 SSBP3-AS1Q7Z2R9 100 aa8.09□□□□□ -1.11
SMG6-201ENST00000263073 IGLV6-57P01721 117 aa8.09□□□□□ -1.12
SMG6-201ENST00000263073 VPREB1P12018 145 aa8.08□□□□□ -1.12
SMG6-201ENST00000263073 UNC80Q8N2C7 3258 aa8.08□□□□□ -1.12
SMG6-201ENST00000263073 Q96NJ1 140 aa8.07□□□□□ -1.12
SMG6-201ENST00000263073 LINC00588Q9Y4M8 146 aa8.07□□□□□ -1.12
SMG6-201ENST00000263073 USP9XQ93008 2570 aaPredicted RBP8.06□□□□□ -1.12
SMG6-201ENST00000263073 Q8NAQ8 132 aa8.05□□□□□ -1.12
SMG6-201ENST00000263073 LINC01600Q96MT4 127 aa8.05□□□□□ -1.12
SMG6-201ENST00000263073 LRRK2Q5S007 2527 aa8.05□□□□□ -1.12
SMG6-201ENST00000263073 RTL8CO15255 209 aa8.05□□□□□ -1.12
SMG6-201ENST00000263073 A8MWP4 228 aa8.04□□□□□ -1.12
SMG6-201ENST00000263073 C16orf90A8MZG2 172 aa8.04□□□□□ -1.12
SMG6-201ENST00000263073 H3BPC8 53 aa8.02□□□□□ -1.13
SMG6-201ENST00000263073 IGFL1Q6UW32 110 aa8.02□□□□□ -1.13
SMG6-201ENST00000263073 DSCR10P59022 87 aa8.02□□□□□ -1.13
SMG6-201ENST00000263073 H7BZZ5 65 aa8.01□□□□□ -1.13
SMG6-201ENST00000263073 GVQW2A0A096LPI5 108 aaPredicted RBP8.01□□□□□ -1.13
SMG6-201ENST00000263073 PKD1L2Q7Z442 2459 aa8.01□□□□□ -1.13
SMG6-201ENST00000263073 ZNF462Q96JM2 2506 aa8.01□□□□□ -1.13
SMG6-201ENST00000263073 CDH23Q9H251 3354 aa8.01□□□□□ -1.13
SMG6-201ENST00000263073 TYMSOSQ8TAI1 123 aa8□□□□□ -1.13
SMG6-201ENST00000263073 ZFYVE26Q68DK2 2539 aa8□□□□□ -1.13
SMG6-201ENST00000263073 IGLV1-50A0A075B6I6 118 aa7.99□□□□□ -1.13
SMG6-201ENST00000263073 MRPL34Q9BQ48 92 aaKnown RBP7.99□□□□□ -1.13
SMG6-201ENST00000263073 ANAPC11Q9NYG5 84 aa7.99□□□□□ -1.13
SMG6-201ENST00000263073 PCSK5Q92824 1860 aa7.99□□□□□ -1.13
SMG6-201ENST00000263073 A0A1B0GW54 56 aa7.98□□□□□ -1.13
SMG6-201ENST00000263073 A0A0C4DFX4 3053 aa7.98□□□□□ -1.13
SMG6-201ENST00000263073 DNAH10OSP0CZ25 163 aa7.98□□□□□ -1.13
SMG6-201ENST00000263073 LINC00528Q8N1L1 170 aa7.98□□□□□ -1.13
SMG6-201ENST00000263073 Q8N377 158 aa7.98□□□□□ -1.13
SMG6-201ENST00000263073 KLKP1Q107X0 134 aa7.97□□□□□ -1.13
SMG6-201ENST00000263073 APLNQ9ULZ1 77 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms