RNA–Protein interactions for RNA: ENST00000262631.10

SCN1B-201, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-201ENST00000262631 A0A0J9YXY3 114 aa15.62■□□□□ 0.09
SCN1B-201ENST00000262631 A0A0U1RRA0 63 aa15.62■□□□□ 0.09
SCN1B-201ENST00000262631 RAB37Q96AX2 223 aa15.62■□□□□ 0.09
SCN1B-201ENST00000262631 C16orf90A8MZG2 172 aa15.61■□□□□ 0.09
SCN1B-201ENST00000262631 NDUFC2-KCTD14E9PQ53 114 aa15.61■□□□□ 0.09
SCN1B-201ENST00000262631 TLX1NBP0CAT3 122 aa15.61■□□□□ 0.09
SCN1B-201ENST00000262631 RPL18AQ02543 176 aaKnown RBP15.61■□□□□ 0.09
SCN1B-201ENST00000262631 LOC107984640A0A0U1RRK4 108 aa15.6■□□□□ 0.09
SCN1B-201ENST00000262631 MEIG1Q5JSS6 88 aa15.6■□□□□ 0.09
SCN1B-201ENST00000262631 A0A096LNI7 61 aa15.6■□□□□ 0.09
SCN1B-201ENST00000262631 CEND1Q8N111 149 aa15.6■□□□□ 0.09
SCN1B-201ENST00000262631 F8W1H4 67 aa15.59■□□□□ 0.09
SCN1B-201ENST00000262631 PANO1I0J062 215 aa15.59■□□□□ 0.09
SCN1B-201ENST00000262631 CHTF8P0CG12 524 aa15.59■□□□□ 0.09
SCN1B-201ENST00000262631 GAGE2BQ13066 116 aa15.58■□□□□ 0.08
SCN1B-201ENST00000262631 GAGE2EQ4V326 116 aa15.58■□□□□ 0.08
SCN1B-201ENST00000262631 GAGE2DQ9UEU5 116 aa15.58■□□□□ 0.08
SCN1B-201ENST00000262631 IGKV2-24A0A0C4DH68 120 aa15.57■□□□□ 0.08
SCN1B-201ENST00000262631 LINC00158P58513 81 aa15.57■□□□□ 0.08
SCN1B-201ENST00000262631 COX17Q14061 63 aa15.57■□□□□ 0.08
SCN1B-201ENST00000262631 FXYD2P54710 66 aa15.57■□□□□ 0.08
SCN1B-201ENST00000262631 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.56■□□□□ 0.08
SCN1B-201ENST00000262631 ADAMTSL4-AS1Q5T5F5 129 aa15.55■□□□□ 0.08
SCN1B-201ENST00000262631 SCGB1D4Q6XE38 83 aa15.55■□□□□ 0.08
SCN1B-201ENST00000262631 DAND5Q8N907 189 aa15.55■□□□□ 0.08
SCN1B-201ENST00000262631 LITAFQ99732 161 aa15.55■□□□□ 0.08
SCN1B-201ENST00000262631 NAA38Q9BRA0 125 aaKnown RBP15.55■□□□□ 0.08
SCN1B-201ENST00000262631 FAM30AQ9NZY2 134 aa15.55■□□□□ 0.08
SCN1B-201ENST00000262631 XAGE1AQ9HD64 81 aa15.54■□□□□ 0.08
SCN1B-201ENST00000262631 DNAH8Q96JB1 4490 aa15.54■□□□□ 0.08
SCN1B-201ENST00000262631 MIR7-3HGQ8N6C7 128 aa15.53■□□□□ 0.08
SCN1B-201ENST00000262631 RPL24P83731 157 aaKnown RBP15.52■□□□□ 0.08
SCN1B-201ENST00000262631 C9orf129Q5T035 196 aaKnown RBP15.52■□□□□ 0.08
SCN1B-201ENST00000262631 SIGMAR1Q99720 223 aa15.51■□□□□ 0.07
SCN1B-201ENST00000262631 SND1-IT1Q9HBX3 110 aa15.51■□□□□ 0.07
SCN1B-201ENST00000262631 PKIGQ9Y2B9 76 aa15.51■□□□□ 0.07
SCN1B-201ENST00000262631 Q6ZSA8 131 aa15.51■□□□□ 0.07
SCN1B-201ENST00000262631 NHP2Q9NX24 153 aaKnown RBP15.51■□□□□ 0.07
SCN1B-201ENST00000262631 TIMM17BO60830 172 aa15.5■□□□□ 0.07
SCN1B-201ENST00000262631 CIRBPQ14011 172 aaKnown RBP15.5■□□□□ 0.07
SCN1B-201ENST00000262631 SPACA4Q8TDM5 124 aa15.5■□□□□ 0.07
SCN1B-201ENST00000262631 A0A1B0GWB2 263 aa15.49■□□□□ 0.07
SCN1B-201ENST00000262631 SPANXB1Q9NS25 103 aaPredicted RBP15.48■□□□□ 0.07
SCN1B-201ENST00000262631 EIF4EBP3O60516 100 aaPredicted RBP15.47■□□□□ 0.07
SCN1B-201ENST00000262631 FAM168BA1KXE4 195 aa15.46■□□□□ 0.07
SCN1B-201ENST00000262631 LINC00474Q9P2X8 69 aa15.46■□□□□ 0.07
SCN1B-201ENST00000262631 HAMPP81172 84 aa15.45■□□□□ 0.06
SCN1B-201ENST00000262631 NPC2P61916 151 aa15.44■□□□□ 0.06
SCN1B-201ENST00000262631 A0A1W2PNN7 141 aa15.44■□□□□ 0.06
SCN1B-201ENST00000262631 K7ERJ3 54 aa15.44■□□□□ 0.06
SCN1B-201ENST00000262631 SOSTDC1Q6X4U4 206 aa15.44■□□□□ 0.06
SCN1B-201ENST00000262631 DPH3Q96FX2 82 aa15.44■□□□□ 0.06
SCN1B-201ENST00000262631 HIST1H4GQ99525 98 aa15.44■□□□□ 0.06
SCN1B-201ENST00000262631 APOBP04114 4563 aaKnown RBP15.43■□□□□ 0.06
SCN1B-201ENST00000262631 KRTAP7-1Q8IUC3 87 aa15.43■□□□□ 0.06
SCN1B-201ENST00000262631 Q8NDZ9 215 aa15.43■□□□□ 0.06
SCN1B-201ENST00000262631 A0A087WYN8 130 aa15.42■□□□□ 0.06
SCN1B-201ENST00000262631 A0A1B0GV72 72 aa15.42■□□□□ 0.06
SCN1B-201ENST00000262631 TMEM238LA0A1B0GVL6 79 aa15.42■□□□□ 0.06
SCN1B-201ENST00000262631 A6NJY4 79 aa15.42■□□□□ 0.06
SCN1B-201ENST00000262631 SERTAD4-AS1Q5TG53 156 aa15.41■□□□□ 0.06
SCN1B-201ENST00000262631 SPANXDQ9BXN6 97 aa15.41■□□□□ 0.06
SCN1B-201ENST00000262631 SPANXCQ9NY87 97 aa15.41■□□□□ 0.06
SCN1B-201ENST00000262631 LYRM7Q5U5X0 104 aa15.4■□□□□ 0.06
SCN1B-201ENST00000262631 SCXQ7RTU7 201 aa15.4■□□□□ 0.06
SCN1B-201ENST00000262631 LINC00308Q8TCZ7 52 aa15.4■□□□□ 0.06
SCN1B-201ENST00000262631 CIRBP-AS1Q8TBR5 109 aa15.39■□□□□ 0.05
SCN1B-201ENST00000262631 FAM19A5Q7Z5A7 132 aaPredicted RBP15.38■□□□□ 0.05
SCN1B-201ENST00000262631 LOC107984156A0A0G2JMH3 177 aa15.38■□□□□ 0.05
SCN1B-201ENST00000262631 ARL17AQ8IVW1 177 aa15.38■□□□□ 0.05
SCN1B-201ENST00000262631 XGP55808 180 aa15.37■□□□□ 0.05
SCN1B-201ENST00000262631 SRSF9Q13242 221 aaKnown RBP eCLIP15.37■□□□□ 0.05
SCN1B-201ENST00000262631 PLAC8Q9NZF1 115 aa15.37■□□□□ 0.05
SCN1B-201ENST00000262631 PRO0461Q9UI25 63 aa15.37■□□□□ 0.05
SCN1B-201ENST00000262631 VPREB1P12018 145 aa15.35■□□□□ 0.05
SCN1B-201ENST00000262631 MUSTN1Q8IVN3 82 aa15.35■□□□□ 0.05
SCN1B-201ENST00000262631 PLA2G2DQ9UNK4 145 aa15.35■□□□□ 0.05
SCN1B-201ENST00000262631 EPM2AB3EWF7 344 aa15.34■□□□□ 0.05
SCN1B-201ENST00000262631 H3BMG7 143 aa15.34■□□□□ 0.05
SCN1B-201ENST00000262631 PRR3P79522 188 aaKnown RBP15.34■□□□□ 0.05
SCN1B-201ENST00000262631 MTURNQ8N3F0 131 aa15.33■□□□□ 0.04
SCN1B-201ENST00000262631 ETDBQ3ZM63 59 aa15.32■□□□□ 0.04
SCN1B-201ENST00000262631 IFITM1P13164 125 aa15.31■□□□□ 0.04
SCN1B-201ENST00000262631 C22orf24Q9Y442 160 aa15.31■□□□□ 0.04
SCN1B-201ENST00000262631 M0QXV9 152 aa15.29■□□□□ 0.04
SCN1B-201ENST00000262631 IGLV5-37A0A075B6J1 123 aa15.28■□□□□ 0.04
SCN1B-201ENST00000262631 PHF5AQ7RTV0 110 aaKnown RBP15.28■□□□□ 0.04
SCN1B-201ENST00000262631 KIAA1109Q2LD37 5005 aa15.28■□□□□ 0.04
SCN1B-201ENST00000262631 NCR3O14931 201 aa15.27■□□□□ 0.03
SCN1B-201ENST00000262631 NKAPP1Q8N9T2 125 aa15.26■□□□□ 0.03
SCN1B-201ENST00000262631 PPDPFQ9H3Y8 114 aa15.26■□□□□ 0.03
SCN1B-201ENST00000262631 RYR1P21817 5038 aa15.26■□□□□ 0.03
SCN1B-201ENST00000262631 BIRC6Q9NR09 4857 aa15.26■□□□□ 0.03
SCN1B-201ENST00000262631 CDK2AP2O75956 126 aa15.25■□□□□ 0.03
SCN1B-201ENST00000262631 NDUFC2O95298 119 aa15.25■□□□□ 0.03
SCN1B-201ENST00000262631 COPS9Q8WXC6 57 aa15.25■□□□□ 0.03
SCN1B-201ENST00000262631 TRBV20-1A0A075B6N2 111 aa15.25■□□□□ 0.03
SCN1B-201ENST00000262631 MRPL55Q7Z7F7 128 aaKnown RBP15.25■□□□□ 0.03
SCN1B-201ENST00000262631 IGKV2-28A0A075B6P5 120 aa15.24■□□□□ 0.03
SCN1B-201ENST00000262631 IGKV2D-28P01615 120 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms