RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 ZNF625Q96I27 306 aaPredicted RBP7.53□□□□□ -1.2
PFDN1-201ENST00000261813 TIMM17BO60830 172 aa7.52□□□□□ -1.21
PFDN1-201ENST00000261813 HNRNPA3P51991 378 aaKnown RBP7.52□□□□□ -1.21
PFDN1-201ENST00000261813 TRBV30A0A0K0K1B3 111 aa7.51□□□□□ -1.21
PFDN1-201ENST00000261813 TMEM238C9JI98 176 aa7.51□□□□□ -1.21
PFDN1-201ENST00000261813 KRTAP10-1P60331 282 aa7.51□□□□□ -1.21
PFDN1-201ENST00000261813 COX17Q14061 63 aa7.51□□□□□ -1.21
PFDN1-201ENST00000261813 HIGD2BQ4VC39 106 aa7.51□□□□□ -1.21
PFDN1-201ENST00000261813 Q6ZVH6 145 aa7.51□□□□□ -1.21
PFDN1-201ENST00000261813 COPS9Q8WXC6 57 aa7.51□□□□□ -1.21
PFDN1-201ENST00000261813 CAMK2N2Q96S95 79 aa7.51□□□□□ -1.21
PFDN1-201ENST00000261813 KRTAP3-1Q9BYR8 98 aa7.51□□□□□ -1.21
PFDN1-201ENST00000261813 A0A0J9YXY3 114 aa7.5□□□□□ -1.21
PFDN1-201ENST00000261813 RNF151Q2KHN1 245 aa7.5□□□□□ -1.21
PFDN1-201ENST00000261813 MEIG1Q5JSS6 88 aa7.5□□□□□ -1.21
PFDN1-201ENST00000261813 KRTAP4-5Q9BYR2 181 aa7.5□□□□□ -1.21
PFDN1-201ENST00000261813 TTTY13Q9BZ97 58 aa7.5□□□□□ -1.21
PFDN1-201ENST00000261813 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.49□□□□□ -1.21
PFDN1-201ENST00000261813 SLPIP03973 132 aa7.49□□□□□ -1.21
PFDN1-201ENST00000261813 DDTP30046 118 aa7.49□□□□□ -1.21
PFDN1-201ENST00000261813 SYCNQ0VAF6 134 aa7.49□□□□□ -1.21
PFDN1-201ENST00000261813 TAL2Q16559 108 aa7.49□□□□□ -1.21
PFDN1-201ENST00000261813 LINC01620Q4KN68 170 aa7.49□□□□□ -1.21
PFDN1-201ENST00000261813 PKIGQ9Y2B9 76 aa7.49□□□□□ -1.21
PFDN1-201ENST00000261813 CNBPP62633 177 aaKnown RBP7.48□□□□□ -1.21
PFDN1-201ENST00000261813 SRSF9Q13242 221 aaKnown RBP eCLIP7.48□□□□□ -1.21
PFDN1-201ENST00000261813 SPANXB1Q9NS25 103 aaPredicted RBP7.48□□□□□ -1.21
PFDN1-201ENST00000261813 CDK2AP2O75956 126 aa7.47□□□□□ -1.21
PFDN1-201ENST00000261813 C2orf82Q6UX34 121 aa7.47□□□□□ -1.21
PFDN1-201ENST00000261813 LINC00526Q96FQ7 95 aa7.47□□□□□ -1.21
PFDN1-201ENST00000261813 ERG28Q9UKR5 140 aa7.47□□□□□ -1.21
PFDN1-201ENST00000261813 HSPG2P98160 4391 aa7.47□□□□□ -1.21
PFDN1-201ENST00000261813 IFITM1P13164 125 aa7.46□□□□□ -1.21
PFDN1-201ENST00000261813 LINC00158P58513 81 aa7.46□□□□□ -1.21
PFDN1-201ENST00000261813 UNQ6190/PRO20217Q6UXQ8 127 aa7.46□□□□□ -1.21
PFDN1-201ENST00000261813 C2orf91Q6ZV80 131 aa7.46□□□□□ -1.21
PFDN1-201ENST00000261813 CARD19Q96LW7 228 aa7.46□□□□□ -1.21
PFDN1-201ENST00000261813 HIST1H4GQ99525 98 aa7.46□□□□□ -1.21
PFDN1-201ENST00000261813 PPDPFQ9H3Y8 114 aa7.46□□□□□ -1.21
PFDN1-201ENST00000261813 HSD52Q0P140 79 aa7.46□□□□□ -1.22
PFDN1-201ENST00000261813 C9orf163Q8N9P6 203 aa7.46□□□□□ -1.22
PFDN1-201ENST00000261813 SPANXDQ9BXN6 97 aa7.46□□□□□ -1.22
PFDN1-201ENST00000261813 SPANXCQ9NY87 97 aa7.46□□□□□ -1.22
PFDN1-201ENST00000261813 M0R143 59 aa7.45□□□□□ -1.22
PFDN1-201ENST00000261813 PTTG1IPP53801 180 aa7.45□□□□□ -1.22
PFDN1-201ENST00000261813 Q6ZRU5 148 aa7.45□□□□□ -1.22
PFDN1-201ENST00000261813 FAM30AQ9NZY2 134 aa7.45□□□□□ -1.22
PFDN1-201ENST00000261813 C6orf48Q9UBA6 75 aa7.45□□□□□ -1.22
PFDN1-201ENST00000261813 TP73-AS1Q9UF72 201 aa7.45□□□□□ -1.22
PFDN1-201ENST00000261813 TLX1NBP0CAT3 122 aa7.44□□□□□ -1.22
PFDN1-201ENST00000261813 SMIM13P0DJ93 91 aa7.44□□□□□ -1.22
PFDN1-201ENST00000261813 PFN2P35080 140 aa7.44□□□□□ -1.22
PFDN1-201ENST00000261813 C10orf25Q5T742 122 aa7.44□□□□□ -1.22
PFDN1-201ENST00000261813 A4D1N5 150 aa7.43□□□□□ -1.22
PFDN1-201ENST00000261813 NDUFC2-KCTD14E9PQ53 114 aa7.43□□□□□ -1.22
PFDN1-201ENST00000261813 RPL24P83731 157 aaKnown RBP7.43□□□□□ -1.22
PFDN1-201ENST00000261813 Q6ZSA8 131 aa7.43□□□□□ -1.22
PFDN1-201ENST00000261813 LITAFQ99732 161 aa7.43□□□□□ -1.22
PFDN1-201ENST00000261813 XGP55808 180 aa7.42□□□□□ -1.22
PFDN1-201ENST00000261813 HAMPP81172 84 aa7.42□□□□□ -1.22
PFDN1-201ENST00000261813 SDIM1Q6ZPB5 146 aa7.42□□□□□ -1.22
PFDN1-201ENST00000261813 CEND1Q8N111 149 aa7.42□□□□□ -1.22
PFDN1-201ENST00000261813 MIR7-3HGQ8N6C7 128 aa7.42□□□□□ -1.22
PFDN1-201ENST00000261813 FAT1Q14517 4588 aa7.41□□□□□ -1.22
PFDN1-201ENST00000261813 A0A0U1RRA0 63 aa7.41□□□□□ -1.22
PFDN1-201ENST00000261813 LOC107984640A0A0U1RRK4 108 aa7.41□□□□□ -1.22
PFDN1-201ENST00000261813 ADAMTSL4-AS1Q5T5F5 129 aa7.41□□□□□ -1.22
PFDN1-201ENST00000261813 Q8N1X5 172 aa7.41□□□□□ -1.22
PFDN1-201ENST00000261813 LOC107984156A0A0G2JMH3 177 aa7.4□□□□□ -1.22
PFDN1-201ENST00000261813 C9orf116Q5BN46 136 aaPredicted RBP7.4□□□□□ -1.22
PFDN1-201ENST00000261813 ARL17AQ8IVW1 177 aa7.4□□□□□ -1.22
PFDN1-201ENST00000261813 LINC00308Q8TCZ7 52 aa7.4□□□□□ -1.22
PFDN1-201ENST00000261813 PANO1I0J062 215 aa7.39□□□□□ -1.23
PFDN1-201ENST00000261813 MUSTN1Q8IVN3 82 aa7.39□□□□□ -1.23
PFDN1-201ENST00000261813 SND1-IT1Q9HBX3 110 aa7.38□□□□□ -1.23
PFDN1-201ENST00000261813 LINC00474Q9P2X8 69 aa7.38□□□□□ -1.23
PFDN1-201ENST00000261813 A6NDN8 102 aa7.37□□□□□ -1.23
PFDN1-201ENST00000261813 CHTF8P0CG12 524 aa7.37□□□□□ -1.23
PFDN1-201ENST00000261813 BVES-AS1Q5T3Y7 98 aa7.37□□□□□ -1.23
PFDN1-201ENST00000261813 DAND5Q8N907 189 aa7.37□□□□□ -1.23
PFDN1-201ENST00000261813 NDUFC2O95298 119 aa7.36□□□□□ -1.23
PFDN1-201ENST00000261813 HINT1P49773 126 aaPredicted RBP7.36□□□□□ -1.23
PFDN1-201ENST00000261813 RPL18AQ02543 176 aaKnown RBP7.36□□□□□ -1.23
PFDN1-201ENST00000261813 SCXQ7RTU7 201 aa7.36□□□□□ -1.23
PFDN1-201ENST00000261813 A0A096LNI7 61 aa7.35□□□□□ -1.23
PFDN1-201ENST00000261813 GAGE2EQ4V326 116 aa7.35□□□□□ -1.23
PFDN1-201ENST00000261813 Q6ZRP5 223 aa7.35□□□□□ -1.23
PFDN1-201ENST00000261813 CIRBP-AS1Q8TBR5 109 aa7.35□□□□□ -1.23
PFDN1-201ENST00000261813 GAGE2DQ9UEU5 116 aa7.35□□□□□ -1.23
PFDN1-201ENST00000261813 IGKV2-24A0A0C4DH68 120 aa7.34□□□□□ -1.23
PFDN1-201ENST00000261813 NPC2P61916 151 aa7.34□□□□□ -1.23
PFDN1-201ENST00000261813 GAGE2BQ13066 116 aa7.34□□□□□ -1.23
PFDN1-201ENST00000261813 SPACA4Q8TDM5 124 aa7.34□□□□□ -1.23
PFDN1-201ENST00000261813 FXYD2P54710 66 aa7.33□□□□□ -1.24
PFDN1-201ENST00000261813 HERC1Q15751 4861 aa7.33□□□□□ -1.24
PFDN1-201ENST00000261813 TRAV13-2A0A0B4J235 113 aa7.33□□□□□ -1.24
PFDN1-201ENST00000261813 A0A0B4J2C4 111 aa7.33□□□□□ -1.24
PFDN1-201ENST00000261813 EPM2AB3EWF7 344 aa7.33□□□□□ -1.24
PFDN1-201ENST00000261813 SMR3BP02814 79 aaPredicted RBP7.33□□□□□ -1.24
PFDN1-201ENST00000261813 BATFQ16520 125 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms