RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 ENHOQ6UWT2 76 aa11.05□□□□□ -0.64
TM9SF1-201ENST00000261789 CCKP06307 115 aa11.04□□□□□ -0.64
TM9SF1-201ENST00000261789 RPL18AQ02543 176 aaKnown RBP11.04□□□□□ -0.64
TM9SF1-201ENST00000261789 C3orf22Q8N5N4 141 aa11.04□□□□□ -0.64
TM9SF1-201ENST00000261789 TMEM256-PLSCR3K7ERE1 68 aa11.03□□□□□ -0.64
TM9SF1-201ENST00000261789 C9orf153Q5TBE3 101 aa11.03□□□□□ -0.64
TM9SF1-201ENST00000261789 XAGE1AQ9HD64 81 aa11.02□□□□□ -0.64
TM9SF1-201ENST00000261789 HIST1H4AP62805 103 aaKnown RBP11.02□□□□□ -0.65
TM9SF1-201ENST00000261789 Q6JHZ5 121 aa11.02□□□□□ -0.65
TM9SF1-201ENST00000261789 LINC00575Q6W349 94 aa11.01□□□□□ -0.65
TM9SF1-201ENST00000261789 WFDC9Q8NEX5 89 aa11.01□□□□□ -0.65
TM9SF1-201ENST00000261789 PRR34Q9NV39 138 aa11.01□□□□□ -0.65
TM9SF1-201ENST00000261789 A0A1B0GX51 115 aa11.01□□□□□ -0.65
TM9SF1-201ENST00000261789 JMJD7-PLA2G4BH0Y9G9 81 aa11□□□□□ -0.65
TM9SF1-201ENST00000261789 LYPD5Q6UWN5 251 aa11□□□□□ -0.65
TM9SF1-201ENST00000261789 FLNBO75369 2602 aaKnown RBP11□□□□□ -0.65
TM9SF1-201ENST00000261789 UQCRQO14949 82 aa11□□□□□ -0.65
TM9SF1-201ENST00000261789 C2orf48Q96LS8 159 aa11□□□□□ -0.65
TM9SF1-201ENST00000261789 RETNQ9HD89 108 aa10.99□□□□□ -0.65
TM9SF1-201ENST00000261789 C6orf48Q9UBA6 75 aa10.99□□□□□ -0.65
TM9SF1-201ENST00000261789 A0A0J9YWU9 116 aa10.99□□□□□ -0.65
TM9SF1-201ENST00000261789 hADV29S1A0JD25 119 aa10.98□□□□□ -0.65
TM9SF1-201ENST00000261789 HIGD2BQ4VC39 106 aa10.98□□□□□ -0.65
TM9SF1-201ENST00000261789 WFDC10BQ8IUB3 73 aa10.98□□□□□ -0.65
TM9SF1-201ENST00000261789 COX7CP15954 63 aa10.97□□□□□ -0.65
TM9SF1-201ENST00000261789 TRBV10-3A0A0K0K1G6 114 aa10.96□□□□□ -0.65
TM9SF1-201ENST00000261789 IGLV6-57P01721 117 aa10.96□□□□□ -0.65
TM9SF1-201ENST00000261789 TENM3Q9P273 2699 aa10.96□□□□□ -0.65
TM9SF1-201ENST00000261789 ATOX1O00244 68 aa10.96□□□□□ -0.66
TM9SF1-201ENST00000261789 M0R2N4 97 aa10.95□□□□□ -0.66
TM9SF1-201ENST00000261789 CYSTM1Q9H1C7 97 aa10.95□□□□□ -0.66
TM9SF1-201ENST00000261789 OXLD1Q5BKU9 147 aa10.95□□□□□ -0.66
TM9SF1-201ENST00000261789 LAMTOR3Q9UHA4 124 aa10.95□□□□□ -0.66
TM9SF1-201ENST00000261789 Q6ZQY7 126 aa10.94□□□□□ -0.66
TM9SF1-201ENST00000261789 F8P00451 2351 aa10.94□□□□□ -0.66
TM9SF1-201ENST00000261789 FAM19A1Q7Z5A9 133 aa10.93□□□□□ -0.66
TM9SF1-201ENST00000261789 USP17L23D6RBM5 183 aa10.93□□□□□ -0.66
TM9SF1-201ENST00000261789 RBM3P98179 157 aaKnown RBP10.92□□□□□ -0.66
TM9SF1-201ENST00000261789 KPRPQ5T749 579 aaPredicted RBP10.92□□□□□ -0.66
TM9SF1-201ENST00000261789 Q6ZTC4 211 aa10.91□□□□□ -0.66
TM9SF1-201ENST00000261789 TRAV23DV6A0A075B6W5 121 aa10.91□□□□□ -0.66
TM9SF1-201ENST00000261789 Q6ZQT0 140 aa10.91□□□□□ -0.66
TM9SF1-201ENST00000261789 ZNF561-AS1K7EIQ3 104 aa10.9□□□□□ -0.66
TM9SF1-201ENST00000261789 GVQW2A0A096LPI5 108 aaPredicted RBP10.9□□□□□ -0.67
TM9SF1-201ENST00000261789 CAMK2N2Q96S95 79 aa10.9□□□□□ -0.67
TM9SF1-201ENST00000261789 KRTAP10-11P60412 298 aa10.89□□□□□ -0.67
TM9SF1-201ENST00000261789 MUC7Q8TAX7 377 aa10.88□□□□□ -0.67
TM9SF1-201ENST00000261789 UBL5Q9BZL1 73 aa10.88□□□□□ -0.67
TM9SF1-201ENST00000261789 CRYGAP11844 174 aa10.87□□□□□ -0.67
TM9SF1-201ENST00000261789 Q6ZRU5 148 aa10.87□□□□□ -0.67
TM9SF1-201ENST00000261789 DIRC1Q969H9 104 aa10.87□□□□□ -0.67
TM9SF1-201ENST00000261789 KRTAP26-1Q6PEX3 210 aa10.87□□□□□ -0.67
TM9SF1-201ENST00000261789 STAB1Q9NY15 2570 aa10.87□□□□□ -0.67
TM9SF1-201ENST00000261789 ZNF73O43830 326 aaPredicted RBP10.86□□□□□ -0.67
TM9SF1-201ENST00000261789 SERP2Q8N6R1 65 aa10.86□□□□□ -0.67
TM9SF1-201ENST00000261789 FBN1P35555 2871 aaKnown RBP10.86□□□□□ -0.67
TM9SF1-201ENST00000261789 ESRGQ1W209 222 aa10.85□□□□□ -0.67
TM9SF1-201ENST00000261789 WIPF1O43516 503 aa10.85□□□□□ -0.67
TM9SF1-201ENST00000261789 C15orf56Q8N910 161 aa10.85□□□□□ -0.67
TM9SF1-201ENST00000261789 VPREB1P12018 145 aa10.84□□□□□ -0.67
TM9SF1-201ENST00000261789 DSCR8Q96T75 97 aa10.84□□□□□ -0.67
TM9SF1-201ENST00000261789 LOC107984640A0A0U1RRK4 108 aa10.84□□□□□ -0.67
TM9SF1-201ENST00000261789 LOC110117498A0A087WWA1 95 aa10.83□□□□□ -0.68
TM9SF1-201ENST00000261789 UPK3BQ9BT76 320 aa10.83□□□□□ -0.68
TM9SF1-201ENST00000261789 CMYA5Q8N3K9 4069 aa10.83□□□□□ -0.68
TM9SF1-201ENST00000261789 COX7BP24311 80 aa10.83□□□□□ -0.68
TM9SF1-201ENST00000261789 GHRHP01286 108 aa10.82□□□□□ -0.68
TM9SF1-201ENST00000261789 HAMPP81172 84 aa10.82□□□□□ -0.68
TM9SF1-201ENST00000261789 ATP5EP2Q5VTU8 51 aa10.81□□□□□ -0.68
TM9SF1-201ENST00000261789 ELOF1P60002 83 aaKnown RBP10.81□□□□□ -0.68
TM9SF1-201ENST00000261789 BAHCC1Q9P281 2608 aa10.81□□□□□ -0.68
TM9SF1-201ENST00000261789 Q6ZRP5 223 aa10.8□□□□□ -0.68
TM9SF1-201ENST00000261789 Q6ZVQ6 151 aa10.8□□□□□ -0.68
TM9SF1-201ENST00000261789 NOTCH1P46531 2555 aa10.8□□□□□ -0.68
TM9SF1-201ENST00000261789 IGKV2D-24A0A075B6R9 120 aa10.8□□□□□ -0.68
TM9SF1-201ENST00000261789 EGFEM1PQ0D2K5 195 aa10.8□□□□□ -0.68
TM9SF1-201ENST00000261789 MAST4O15021 2626 aa10.79□□□□□ -0.68
TM9SF1-201ENST00000261789 LINC01547P58512 204 aaPredicted RBP10.79□□□□□ -0.68
TM9SF1-201ENST00000261789 NDUFC2-KCTD14E9PQ53 114 aa10.79□□□□□ -0.68
TM9SF1-201ENST00000261789 C1orf43Q9BWL3 253 aa10.78□□□□□ -0.68
TM9SF1-201ENST00000261789 H3BNG1 76 aa10.78□□□□□ -0.68
TM9SF1-201ENST00000261789 M0R378 163 aa10.77□□□□□ -0.69
TM9SF1-201ENST00000261789 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.77□□□□□ -0.69
TM9SF1-201ENST00000261789 SCXQ7RTU7 201 aa10.77□□□□□ -0.69
TM9SF1-201ENST00000261789 DEFB131BA0A096LNP1 70 aa10.76□□□□□ -0.69
TM9SF1-201ENST00000261789 TRBV7-4A0A0J9YYF1 115 aa10.75□□□□□ -0.69
TM9SF1-201ENST00000261789 LINC00528Q8N1L1 170 aa10.74□□□□□ -0.69
TM9SF1-201ENST00000261789 J3KT08 172 aa10.73□□□□□ -0.69
TM9SF1-201ENST00000261789 C11orf45Q8TAV5 145 aa10.72□□□□□ -0.69
TM9SF1-201ENST00000261789 TRAV10A0A0B4J240 114 aa10.72□□□□□ -0.69
TM9SF1-201ENST00000261789 SERTAD4-AS1Q5TG53 156 aa10.72□□□□□ -0.69
TM9SF1-201ENST00000261789 PDE6GP18545 87 aa10.71□□□□□ -0.69
TM9SF1-201ENST00000261789 SYCNQ0VAF6 134 aa10.71□□□□□ -0.69
TM9SF1-201ENST00000261789 KRTAP24-1Q3LI83 254 aa10.71□□□□□ -0.69
TM9SF1-201ENST00000261789 LINC01556Q5JQF7 62 aa10.71□□□□□ -0.69
TM9SF1-201ENST00000261789 TRBV7-6A0A0J9YX20 115 aa10.7□□□□□ -0.7
TM9SF1-201ENST00000261789 FAM19A5Q7Z5A7 132 aaPredicted RBP10.7□□□□□ -0.7
TM9SF1-201ENST00000261789 C20orf197Q8N268 126 aa10.7□□□□□ -0.7
TM9SF1-201ENST00000261789 H3BQ85 93 aa10.69□□□□□ -0.7
TM9SF1-201ENST00000261789 DEFB105AQ8NG35 78 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms