RNA–Protein interactions for RNA: ENST00000259008.6

BRIP1-201, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRIP1, Length 6,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-201ENST00000259008 SMCR5Q8TEV8 140 aa4.36□□□□□ -1.71
BRIP1-201ENST00000259008 LIMD2Q9BT23 127 aa4.36□□□□□ -1.71
BRIP1-201ENST00000259008 FAM19A4Q96LR4 140 aa4.36□□□□□ -1.71
BRIP1-201ENST00000259008 CSDC2Q9Y534 153 aaKnown RBP4.36□□□□□ -1.71
BRIP1-201ENST00000259008 BOD1L1Q8NFC6 3051 aa4.35□□□□□ -1.71
BRIP1-201ENST00000259008 TIMM17BO60830 172 aa4.35□□□□□ -1.71
BRIP1-201ENST00000259008 C5orf47Q569G3 176 aa4.35□□□□□ -1.71
BRIP1-201ENST00000259008 Q9UF83 564 aa4.35□□□□□ -1.71
BRIP1-201ENST00000259008 NDUFV3P56181 108 aaKnown RBP4.35□□□□□ -1.71
BRIP1-201ENST00000259008 CASC10Q5T4H9 136 aa4.35□□□□□ -1.71
BRIP1-201ENST00000259008 FAM30AQ9NZY2 134 aa4.35□□□□□ -1.71
BRIP1-201ENST00000259008 DEFB116Q30KQ4 102 aa4.35□□□□□ -1.71
BRIP1-201ENST00000259008 MOBPQ13875 183 aa4.35□□□□□ -1.71
BRIP1-201ENST00000259008 USP9XQ93008 2570 aaPredicted RBP4.34□□□□□ -1.71
BRIP1-201ENST00000259008 ZZEF1O43149 2961 aa4.34□□□□□ -1.71
BRIP1-201ENST00000259008 WFDC2Q14508 124 aa4.34□□□□□ -1.71
BRIP1-201ENST00000259008 ENHOQ6UWT2 76 aa4.34□□□□□ -1.71
BRIP1-201ENST00000259008 PCP4P48539 62 aa4.34□□□□□ -1.72
BRIP1-201ENST00000259008 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.34□□□□□ -1.72
BRIP1-201ENST00000259008 AMELXQ99217 191 aa4.34□□□□□ -1.72
BRIP1-201ENST00000259008 C6orf48Q9UBA6 75 aa4.33□□□□□ -1.72
BRIP1-201ENST00000259008 BSNQ9UPA5 3926 aa4.33□□□□□ -1.72
BRIP1-201ENST00000259008 LINC00167Q96N53 147 aa4.33□□□□□ -1.72
BRIP1-201ENST00000259008 ATMQ13315 3056 aa4.33□□□□□ -1.72
BRIP1-201ENST00000259008 H3BT86 120 aa4.33□□□□□ -1.72
BRIP1-201ENST00000259008 LINC00336Q6ZUF6 198 aa4.33□□□□□ -1.72
BRIP1-201ENST00000259008 TSPEAR-AS2P59090 65 aa4.33□□□□□ -1.72
BRIP1-201ENST00000259008 Q6ZVQ6 151 aa4.33□□□□□ -1.72
BRIP1-201ENST00000259008 CSNK1G2-AS1Q8NCQ2 148 aa4.33□□□□□ -1.72
BRIP1-201ENST00000259008 SDIM1Q6ZPB5 146 aa4.32□□□□□ -1.72
BRIP1-201ENST00000259008 KIF25-AS1Q9Y6Z4 181 aa4.32□□□□□ -1.72
BRIP1-201ENST00000259008 MYO9AB2RTY4 2548 aa4.32□□□□□ -1.72
BRIP1-201ENST00000259008 COX8CQ7Z4L0 72 aa4.32□□□□□ -1.72
BRIP1-201ENST00000259008 NBEAQ8NFP9 2946 aa4.32□□□□□ -1.72
BRIP1-201ENST00000259008 APLNQ9ULZ1 77 aa4.32□□□□□ -1.72
BRIP1-201ENST00000259008 DMXL2Q8TDJ6 3036 aa4.32□□□□□ -1.72
BRIP1-201ENST00000259008 ADAMTSL4-AS1Q5T5F5 129 aa4.31□□□□□ -1.72
BRIP1-201ENST00000259008 TEN1Q86WV5 123 aa4.31□□□□□ -1.72
BRIP1-201ENST00000259008 A0A087WYN8 130 aa4.31□□□□□ -1.72
BRIP1-201ENST00000259008 CRYGAP11844 174 aa4.31□□□□□ -1.72
BRIP1-201ENST00000259008 FAM168BA1KXE4 195 aa4.31□□□□□ -1.72
BRIP1-201ENST00000259008 TAX1BP3O14907 124 aa4.31□□□□□ -1.72
BRIP1-201ENST00000259008 Q8N814 137 aa4.31□□□□□ -1.72
BRIP1-201ENST00000259008 A0A087WTM6 91 aa4.3□□□□□ -1.72
BRIP1-201ENST00000259008 LINC00476Q8WZB0 136 aa4.3□□□□□ -1.72
BRIP1-201ENST00000259008 A0A087WSZ3 146 aa4.3□□□□□ -1.72
BRIP1-201ENST00000259008 FAM236AA0A1B0GUQ0 79 aa4.3□□□□□ -1.72
BRIP1-201ENST00000259008 FAM236BA0A1B0GV22 79 aa4.3□□□□□ -1.72
BRIP1-201ENST00000259008 MTORP42345 2549 aa4.3□□□□□ -1.72
BRIP1-201ENST00000259008 Q6JHZ5 121 aa4.29□□□□□ -1.72
BRIP1-201ENST00000259008 LINC01561Q8N1V8 128 aa4.29□□□□□ -1.72
BRIP1-201ENST00000259008 FLNBO75369 2602 aaKnown RBP4.29□□□□□ -1.72
BRIP1-201ENST00000259008 EPM2AB3EWF7 344 aa4.29□□□□□ -1.72
BRIP1-201ENST00000259008 USP9YO00507 2555 aaPredicted RBP4.29□□□□□ -1.72
BRIP1-201ENST00000259008 URB1-AS1Q96HZ7 61 aa4.28□□□□□ -1.72
BRIP1-201ENST00000259008 KALRNO60229 2985 aa4.28□□□□□ -1.72
BRIP1-201ENST00000259008 SETD2Q9BYW2 2564 aaPredicted RBP4.28□□□□□ -1.72
BRIP1-201ENST00000259008 GIG44P09565 113 aaPredicted RBP4.27□□□□□ -1.73
BRIP1-201ENST00000259008 LINC00528Q8N1L1 170 aa4.27□□□□□ -1.73
BRIP1-201ENST00000259008 CR1P17927 2039 aa4.27□□□□□ -1.73
BRIP1-201ENST00000259008 GVQW2A0A096LPI5 108 aaPredicted RBP4.27□□□□□ -1.73
BRIP1-201ENST00000259008 IGHV3OR16-9A0A0B4J2B5 98 aa4.27□□□□□ -1.73
BRIP1-201ENST00000259008 MGAQ8IWI9 3026 aa4.27□□□□□ -1.73
BRIP1-201ENST00000259008 COX6B2Q6YFQ2 88 aa4.27□□□□□ -1.73
BRIP1-201ENST00000259008 NDUFC2O95298 119 aa4.26□□□□□ -1.73
BRIP1-201ENST00000259008 SPINK1P00995 79 aa4.26□□□□□ -1.73
BRIP1-201ENST00000259008 TNP2Q05952 138 aa4.26□□□□□ -1.73
BRIP1-201ENST00000259008 C3orf22Q8N5N4 141 aa4.26□□□□□ -1.73
BRIP1-201ENST00000259008 KIAA0087Q14695 138 aa4.26□□□□□ -1.73
BRIP1-201ENST00000259008 YPEL4Q96NS1 127 aa4.25□□□□□ -1.73
BRIP1-201ENST00000259008 ADGRG4Q8IZF6 3080 aa4.25□□□□□ -1.73
BRIP1-201ENST00000259008 ATOX1O00244 68 aa4.25□□□□□ -1.73
BRIP1-201ENST00000259008 BCE1O60756 84 aa4.25□□□□□ -1.73
BRIP1-201ENST00000259008 CDIP1Q9H305 208 aa4.25□□□□□ -1.73
BRIP1-201ENST00000259008 AKAP13Q12802 2813 aa4.25□□□□□ -1.73
BRIP1-201ENST00000259008 LINC00575Q6W349 94 aa4.24□□□□□ -1.73
BRIP1-201ENST00000259008 IGKV2D-30A0A075B6S6 120 aa4.24□□□□□ -1.73
BRIP1-201ENST00000259008 IGKV2-30P06310 120 aa4.24□□□□□ -1.73
BRIP1-201ENST00000259008 ST20-AS1Q8NBB2 130 aa4.24□□□□□ -1.73
BRIP1-201ENST00000259008 SMG1Q96Q15 3661 aaKnown RBP4.24□□□□□ -1.73
BRIP1-201ENST00000259008 KLK9Q2XQG4 91 aa4.23□□□□□ -1.73
BRIP1-201ENST00000259008 C2orf91Q6ZV80 131 aa4.23□□□□□ -1.73
BRIP1-201ENST00000259008 HELZ2Q9BYK8 2649 aaKnown RBP4.23□□□□□ -1.73
BRIP1-201ENST00000259008 C9orf92A6NGG3 77 aa4.23□□□□□ -1.73
BRIP1-201ENST00000259008 LINC01547P58512 204 aaPredicted RBP4.23□□□□□ -1.73
BRIP1-201ENST00000259008 SMIM20Q8N5G0 67 aa4.23□□□□□ -1.73
BRIP1-201ENST00000259008 Q8NBF4 154 aa4.23□□□□□ -1.73
BRIP1-201ENST00000259008 A0A096LNJ9 63 aa4.23□□□□□ -1.73
BRIP1-201ENST00000259008 TMEM258P61165 79 aa4.23□□□□□ -1.73
BRIP1-201ENST00000259008 SERTAD4-AS1Q5TG53 156 aa4.23□□□□□ -1.73
BRIP1-201ENST00000259008 Q96NJ1 140 aa4.23□□□□□ -1.73
BRIP1-201ENST00000259008 LINC00643Q86TS7 51 aa4.23□□□□□ -1.73
BRIP1-201ENST00000259008 ATP11AUNQ6ZP68 121 aa4.22□□□□□ -1.73
BRIP1-201ENST00000259008 Q8N9L7 120 aa4.22□□□□□ -1.73
BRIP1-201ENST00000259008 LINC00304Q8N9R0 145 aa4.22□□□□□ -1.73
BRIP1-201ENST00000259008 DCHS2Q6V1P9 2916 aa4.22□□□□□ -1.73
BRIP1-201ENST00000259008 IGLV5-39A0A0G2JS06 123 aa4.21□□□□□ -1.74
BRIP1-201ENST00000259008 ANAPC11Q9NYG5 84 aa4.21□□□□□ -1.74
BRIP1-201ENST00000259008 HCG22E2RYF7 251 aa4.21□□□□□ -1.74
BRIP1-201ENST00000259008 PCOTHQ58A44 107 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms