RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 LCE6AA0A183 80 aa8.97□□□□□ -0.97
PRPF38A-201ENST00000257181 IGLV1-50A0A075B6I6 118 aa8.97□□□□□ -0.97
PRPF38A-201ENST00000257181 SPACA4Q8TDM5 124 aa8.97□□□□□ -0.97
PRPF38A-201ENST00000257181 GIG44P09565 113 aaPredicted RBP8.96□□□□□ -0.97
PRPF38A-201ENST00000257181 URB1-AS1Q96HZ7 61 aa8.96□□□□□ -0.98
PRPF38A-201ENST00000257181 SPTBN4Q9H254 2564 aa8.95□□□□□ -0.98
PRPF38A-201ENST00000257181 C2orf91Q6ZV80 131 aa8.95□□□□□ -0.98
PRPF38A-201ENST00000257181 PSORS1C2Q9UIG4 136 aa8.95□□□□□ -0.98
PRPF38A-201ENST00000257181 TSPEAR-AS2P59090 65 aa8.94□□□□□ -0.98
PRPF38A-201ENST00000257181 LINC00528Q8N1L1 170 aa8.94□□□□□ -0.98
PRPF38A-201ENST00000257181 C20orf197Q8N268 126 aa8.94□□□□□ -0.98
PRPF38A-201ENST00000257181 UQCRQO14949 82 aa8.94□□□□□ -0.98
PRPF38A-201ENST00000257181 PRR4Q16378 134 aa8.93□□□□□ -0.98
PRPF38A-201ENST00000257181 C3orf22Q8N5N4 141 aa8.93□□□□□ -0.98
PRPF38A-201ENST00000257181 KCNQ1DNQ9H478 68 aa8.93□□□□□ -0.98
PRPF38A-201ENST00000257181 CXCL6P80162 114 aa8.93□□□□□ -0.98
PRPF38A-201ENST00000257181 ADAMTSL4-AS1Q5T5F5 129 aa8.92□□□□□ -0.98
PRPF38A-201ENST00000257181 H3BPC8 53 aa8.92□□□□□ -0.98
PRPF38A-201ENST00000257181 LINC00313P59037 77 aa8.92□□□□□ -0.98
PRPF38A-201ENST00000257181 A0A096LNJ9 63 aa8.91□□□□□ -0.98
PRPF38A-201ENST00000257181 IGLV7-43P04211 117 aa8.91□□□□□ -0.98
PRPF38A-201ENST00000257181 C5orf47Q569G3 176 aa8.91□□□□□ -0.98
PRPF38A-201ENST00000257181 ABCA12Q86UK0 2595 aa8.91□□□□□ -0.98
PRPF38A-201ENST00000257181 HCG22E2RYF7 251 aa8.91□□□□□ -0.98
PRPF38A-201ENST00000257181 PLXNB1O43157 2135 aa8.9□□□□□ -0.98
PRPF38A-201ENST00000257181 F8P00451 2351 aa8.9□□□□□ -0.98
PRPF38A-201ENST00000257181 KIAA0087Q14695 138 aa8.9□□□□□ -0.98
PRPF38A-201ENST00000257181 VPREB1P12018 145 aa8.9□□□□□ -0.99
PRPF38A-201ENST00000257181 SCXQ7RTU7 201 aa8.89□□□□□ -0.99
PRPF38A-201ENST00000257181 PRR3P79522 188 aaKnown RBP8.89□□□□□ -0.99
PRPF38A-201ENST00000257181 AGRNO00468 2067 aa8.89□□□□□ -0.99
PRPF38A-201ENST00000257181 C2CD3Q4AC94 2353 aa8.88□□□□□ -0.99
PRPF38A-201ENST00000257181 IGLV5-37A0A075B6J1 123 aa8.88□□□□□ -0.99
PRPF38A-201ENST00000257181 A0A0U1RQV1 116 aa8.88□□□□□ -0.99
PRPF38A-201ENST00000257181 SPINK1P00995 79 aa8.88□□□□□ -0.99
PRPF38A-201ENST00000257181 SDIM1Q6ZPB5 146 aa8.88□□□□□ -0.99
PRPF38A-201ENST00000257181 TRBV7-4A0A0J9YYF1 115 aa8.87□□□□□ -0.99
PRPF38A-201ENST00000257181 IGLV6-57P01721 117 aa8.87□□□□□ -0.99
PRPF38A-201ENST00000257181 C15orf56Q8N910 161 aa8.87□□□□□ -0.99
PRPF38A-201ENST00000257181 hDV103S1A0JD37 113 aa8.86□□□□□ -0.99
PRPF38A-201ENST00000257181 SERP2Q8N6R1 65 aa8.86□□□□□ -0.99
PRPF38A-201ENST00000257181 CDIP1Q9H305 208 aa8.86□□□□□ -0.99
PRPF38A-201ENST00000257181 TRAV7A0A075B6U4 112 aa8.86□□□□□ -0.99
PRPF38A-201ENST00000257181 FAM30AQ9NZY2 134 aa8.86□□□□□ -0.99
PRPF38A-201ENST00000257181 FASNP49327 2511 aaKnown RBP8.86□□□□□ -0.99
PRPF38A-201ENST00000257181 JMJD1CQ15652 2540 aa8.86□□□□□ -0.99
PRPF38A-201ENST00000257181 ZFYVE26Q68DK2 2539 aa8.85□□□□□ -0.99
PRPF38A-201ENST00000257181 FAM229BQ4G0N7 80 aa8.85□□□□□ -0.99
PRPF38A-201ENST00000257181 LOC110117498A0A087WWA1 95 aa8.85□□□□□ -0.99
PRPF38A-201ENST00000257181 CD164Q04900 197 aa8.85□□□□□ -0.99
PRPF38A-201ENST00000257181 Q6Q795 121 aa8.84□□□□□ -0.99
PRPF38A-201ENST00000257181 COX6B2Q6YFQ2 88 aa8.83□□□□□ -1
PRPF38A-201ENST00000257181 LINC01547P58512 204 aaPredicted RBP8.82□□□□□ -1
PRPF38A-201ENST00000257181 CHTF8P0CG12 524 aa8.81□□□□□ -1
PRPF38A-201ENST00000257181 ST20-AS1Q8NBB2 130 aa8.81□□□□□ -1
PRPF38A-201ENST00000257181 MYO9AB2RTY4 2548 aa8.8□□□□□ -1
PRPF38A-201ENST00000257181 LINC00310P59036 64 aa8.8□□□□□ -1
PRPF38A-201ENST00000257181 USP9XQ93008 2570 aaPredicted RBP8.8□□□□□ -1
PRPF38A-201ENST00000257181 H0Y9P7 68 aa8.79□□□□□ -1
PRPF38A-201ENST00000257181 RBM12B-AS1Q9P1G2 102 aa8.78□□□□□ -1
PRPF38A-201ENST00000257181 EPG5Q9HCE0 2579 aa8.77□□□□□ -1.01
PRPF38A-201ENST00000257181 LINC00208Q96KT6 92 aa8.76□□□□□ -1.01
PRPF38A-201ENST00000257181 Q96NJ1 140 aa8.75□□□□□ -1.01
PRPF38A-201ENST00000257181 LOC101927531A0A1B0GV80 90 aa8.75□□□□□ -1.01
PRPF38A-201ENST00000257181 TNP2Q05952 138 aa8.74□□□□□ -1.01
PRPF38A-201ENST00000257181 Q8N3U1 123 aa8.74□□□□□ -1.01
PRPF38A-201ENST00000257181 PLAC8Q9NZF1 115 aa8.73□□□□□ -1.01
PRPF38A-201ENST00000257181 TRBV7-7A0A0K0K1E9 115 aa8.72□□□□□ -1.01
PRPF38A-201ENST00000257181 A8MWP4 228 aa8.72□□□□□ -1.01
PRPF38A-201ENST00000257181 SPRR4Q96PI1 79 aa8.72□□□□□ -1.01
PRPF38A-201ENST00000257181 SERTAD4-AS1Q5TG53 156 aa8.72□□□□□ -1.01
PRPF38A-201ENST00000257181 OXTP01178 125 aa8.72□□□□□ -1.01
PRPF38A-201ENST00000257181 C7orf65Q6ZTY9 151 aa8.71□□□□□ -1.01
PRPF38A-201ENST00000257181 ACYP2P14621 99 aa8.71□□□□□ -1.02
PRPF38A-201ENST00000257181 FN1P02751 2386 aaKnown RBP8.71□□□□□ -1.02
PRPF38A-201ENST00000257181 IGKV2D-30A0A075B6S6 120 aa8.71□□□□□ -1.02
PRPF38A-201ENST00000257181 TRAV22A0A0B4J277 110 aa8.71□□□□□ -1.02
PRPF38A-201ENST00000257181 IGKV2-30P06310 120 aa8.71□□□□□ -1.02
PRPF38A-201ENST00000257181 COX7CP15954 63 aa8.69□□□□□ -1.02
PRPF38A-201ENST00000257181 SMR3BP02814 79 aaPredicted RBP8.69□□□□□ -1.02
PRPF38A-201ENST00000257181 TMEM254Q8TBM7 123 aa8.68□□□□□ -1.02
PRPF38A-201ENST00000257181 C9orf129Q5T035 196 aaKnown RBP8.68□□□□□ -1.02
PRPF38A-201ENST00000257181 MRPL34Q9BQ48 92 aaKnown RBP8.67□□□□□ -1.02
PRPF38A-201ENST00000257181 C1orf64Q8NEQ6 169 aa8.67□□□□□ -1.02
PRPF38A-201ENST00000257181 DSCAML1Q8TD84 2053 aa8.66□□□□□ -1.02
PRPF38A-201ENST00000257181 CR1P17927 2039 aa8.66□□□□□ -1.02
PRPF38A-201ENST00000257181 USP9YO00507 2555 aaPredicted RBP8.66□□□□□ -1.02
PRPF38A-201ENST00000257181 Q6ZQT0 140 aa8.66□□□□□ -1.02
PRPF38A-201ENST00000257181 Q9UF83 564 aa8.65□□□□□ -1.02
PRPF38A-201ENST00000257181 FAM168BA1KXE4 195 aa8.65□□□□□ -1.02
PRPF38A-201ENST00000257181 MTORP42345 2549 aa8.65□□□□□ -1.02
PRPF38A-201ENST00000257181 SOSTDC1Q6X4U4 206 aa8.65□□□□□ -1.02
PRPF38A-201ENST00000257181 BRK1Q8WUW1 75 aa8.62□□□□□ -1.03
PRPF38A-201ENST00000257181 RETNLBQ9BQ08 111 aa8.62□□□□□ -1.03
PRPF38A-201ENST00000257181 MUC4Q99102 2169 aa8.6□□□□□ -1.03
PRPF38A-201ENST00000257181 A0A1B0GVX0 72 aa8.6□□□□□ -1.03
PRPF38A-201ENST00000257181 IGLV7-46A0A075B6I9 117 aa8.6□□□□□ -1.03
PRPF38A-201ENST00000257181 A0A1W2PNN7 141 aa8.59□□□□□ -1.03
PRPF38A-201ENST00000257181 MT-ATP8P03928 68 aa8.59□□□□□ -1.03
PRPF38A-201ENST00000257181 LITAFQ99732 161 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms