RNA–Protein interactions for RNA: ENST00000254998.2

NXT1-201, Transcript of nuclear transport factor 2 like export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXT1, Length 1,123 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXT1-201ENST00000254998 C3orf79P0CE67 100 aa13.26□□□□□ -0.29
NXT1-201ENST00000254998 LRP1Q07954 4544 aaKnown RBP13.25□□□□□ -0.29
NXT1-201ENST00000254998 LINC00587B1AMM8 73 aa13.25□□□□□ -0.29
NXT1-201ENST00000254998 J3QQQ9 107 aa13.25□□□□□ -0.29
NXT1-201ENST00000254998 LINC00158P58513 81 aa13.25□□□□□ -0.29
NXT1-201ENST00000254998 FAT3Q8TDW7 4589 aa13.24□□□□□ -0.29
NXT1-201ENST00000254998 J3QL48 77 aa13.24□□□□□ -0.29
NXT1-201ENST00000254998 NMUP48645 174 aa13.24□□□□□ -0.29
NXT1-201ENST00000254998 IGLV7-43P04211 117 aa13.23□□□□□ -0.29
NXT1-201ENST00000254998 E9PLD3 99 aa13.22□□□□□ -0.29
NXT1-201ENST00000254998 SMIM13P0DJ93 91 aa13.22□□□□□ -0.29
NXT1-201ENST00000254998 VPREB1P12018 145 aa13.22□□□□□ -0.29
NXT1-201ENST00000254998 MEIG1Q5JSS6 88 aa13.22□□□□□ -0.29
NXT1-201ENST00000254998 NKAPP1Q8N9T2 125 aa13.22□□□□□ -0.29
NXT1-201ENST00000254998 LGALS3P17931 250 aaKnown RBP13.21□□□□□ -0.29
NXT1-201ENST00000254998 KRTDAPP60985 99 aa13.21□□□□□ -0.29
NXT1-201ENST00000254998 RPL24P83731 157 aaKnown RBP13.21□□□□□ -0.29
NXT1-201ENST00000254998 LINC00167Q96N53 147 aa13.21□□□□□ -0.29
NXT1-201ENST00000254998 A0A0U1RRA0 63 aa13.19□□□□□ -0.3
NXT1-201ENST00000254998 MIR7-3HGQ8N6C7 128 aa13.18□□□□□ -0.3
NXT1-201ENST00000254998 C20orf202A1L168 122 aa13.17□□□□□ -0.3
NXT1-201ENST00000254998 REG3GQ6UW15 175 aa13.17□□□□□ -0.3
NXT1-201ENST00000254998 HIST3H2BBQ8N257 126 aa13.17□□□□□ -0.3
NXT1-201ENST00000254998 Q8NDZ9 215 aa13.17□□□□□ -0.3
NXT1-201ENST00000254998 GAGE10A6NGK3 116 aa13.16□□□□□ -0.3
NXT1-201ENST00000254998 RPL37AP8A6NKH3 93 aa13.15□□□□□ -0.3
NXT1-201ENST00000254998 DIRC1Q969H9 104 aa13.15□□□□□ -0.3
NXT1-201ENST00000254998 AKR1D1P51857 326 aa13.14□□□□□ -0.31
NXT1-201ENST00000254998 S100A6P06703 90 aa13.13□□□□□ -0.31
NXT1-201ENST00000254998 LINC01600Q96MT4 127 aa13.13□□□□□ -0.31
NXT1-201ENST00000254998 HIST1H2BLQ99880 126 aa13.13□□□□□ -0.31
NXT1-201ENST00000254998 HERC1Q15751 4861 aa13.13□□□□□ -0.31
NXT1-201ENST00000254998 LOC107984156A0A0G2JMH3 177 aa13.12□□□□□ -0.31
NXT1-201ENST00000254998 BCE1O60756 84 aa13.12□□□□□ -0.31
NXT1-201ENST00000254998 MT1HL1P0DM35 61 aa13.12□□□□□ -0.31
NXT1-201ENST00000254998 S100A2P29034 98 aa13.12□□□□□ -0.31
NXT1-201ENST00000254998 ARL17AQ8IVW1 177 aa13.12□□□□□ -0.31
NXT1-201ENST00000254998 IGLV1-50A0A075B6I6 118 aa13.11□□□□□ -0.31
NXT1-201ENST00000254998 H0Y9J4 135 aa13.11□□□□□ -0.31
NXT1-201ENST00000254998 BOD1L2Q8IYS8 172 aa13.11□□□□□ -0.31
NXT1-201ENST00000254998 A0A0J9YXY3 114 aa13.1□□□□□ -0.31
NXT1-201ENST00000254998 ZNF861PO60384 105 aa13.1□□□□□ -0.31
NXT1-201ENST00000254998 M0R378 163 aa13.09□□□□□ -0.31
NXT1-201ENST00000254998 IGKV2-28A0A075B6P5 120 aa13.08□□□□□ -0.32
NXT1-201ENST00000254998 IGKV2D-26A0A0A0MRZ7 120 aa13.08□□□□□ -0.32
NXT1-201ENST00000254998 IGKV2D-28P01615 120 aa13.08□□□□□ -0.32
NXT1-201ENST00000254998 DAND5Q8N907 189 aa13.07□□□□□ -0.32
NXT1-201ENST00000254998 RPL28P46779 137 aaKnown RBP13.06□□□□□ -0.32
NXT1-201ENST00000254998 TIMM17BO60830 172 aa13.05□□□□□ -0.32
NXT1-201ENST00000254998 ZNF815PA8K554 130 aa13.04□□□□□ -0.32
NXT1-201ENST00000254998 SNRPEP62304 92 aaKnown RBP13.04□□□□□ -0.32
NXT1-201ENST00000254998 ADAMTSL4-AS1Q5T5F5 129 aa13.04□□□□□ -0.32
NXT1-201ENST00000254998 KRTAP13-1Q8IUC0 172 aa13.04□□□□□ -0.32
NXT1-201ENST00000254998 C5orf52A6NGY3 159 aa13.03□□□□□ -0.32
NXT1-201ENST00000254998 KRTAP10-8P60410 259 aa13.03□□□□□ -0.32
NXT1-201ENST00000254998 ANKRD39Q53RE8 183 aa13.03□□□□□ -0.32
NXT1-201ENST00000254998 ATOH7Q8N100 152 aa13.03□□□□□ -0.32
NXT1-201ENST00000254998 LITAFQ99732 161 aa13.03□□□□□ -0.32
NXT1-201ENST00000254998 TMEM126AQ9H061 195 aa13.03□□□□□ -0.32
NXT1-201ENST00000254998 MIEN1Q9BRT3 115 aa13.02□□□□□ -0.33
NXT1-201ENST00000254998 TNXBP22105 4242 aa13.02□□□□□ -0.33
NXT1-201ENST00000254998 TRBV10-2A0A0K0K1G8 114 aa13.01□□□□□ -0.33
NXT1-201ENST00000254998 TMEM238C9JI98 176 aa13.01□□□□□ -0.33
NXT1-201ENST00000254998 NCR3O14931 201 aa13.01□□□□□ -0.33
NXT1-201ENST00000254998 NDUFC2O95298 119 aa13.01□□□□□ -0.33
NXT1-201ENST00000254998 TTTY13Q9BZ97 58 aa13.01□□□□□ -0.33
NXT1-201ENST00000254998 KRTAP1-4P0C5Y4 121 aa12.99□□□□□ -0.33
NXT1-201ENST00000254998 UBE2AP49459 152 aa12.99□□□□□ -0.33
NXT1-201ENST00000254998 SOSTDC1Q6X4U4 206 aa12.99□□□□□ -0.33
NXT1-201ENST00000254998 PRYO14603 147 aa12.98□□□□□ -0.33
NXT1-201ENST00000254998 SPANXB1Q9NS25 103 aaPredicted RBP12.98□□□□□ -0.33
NXT1-201ENST00000254998 KCNQ1DNQ9H478 68 aa12.97□□□□□ -0.33
NXT1-201ENST00000254998 EIF4EBP3O60516 100 aaPredicted RBP12.96□□□□□ -0.33
NXT1-201ENST00000254998 TRBV10-3A0A0K0K1G6 114 aa12.95□□□□□ -0.34
NXT1-201ENST00000254998 FAM19A1Q7Z5A9 133 aa12.95□□□□□ -0.34
NXT1-201ENST00000254998 LINC00308Q8TCZ7 52 aa12.95□□□□□ -0.34
NXT1-201ENST00000254998 SPRR1AP35321 89 aa12.93□□□□□ -0.34
NXT1-201ENST00000254998 NPC2P61916 151 aa12.93□□□□□ -0.34
NXT1-201ENST00000254998 PCP2Q8IVA1 136 aa12.93□□□□□ -0.34
NXT1-201ENST00000254998 PRLHP81277 87 aa12.92□□□□□ -0.34
NXT1-201ENST00000254998 SCGB1D4Q6XE38 83 aa12.92□□□□□ -0.34
NXT1-201ENST00000254998 HSBP1L1C9JCN9 74 aa12.91□□□□□ -0.34
NXT1-201ENST00000254998 IGLV6-57P01721 117 aa12.91□□□□□ -0.34
NXT1-201ENST00000254998 DDTP30046 118 aa12.91□□□□□ -0.34
NXT1-201ENST00000254998 S100A12P80511 92 aa12.91□□□□□ -0.34
NXT1-201ENST00000254998 LINC00337Q8N6G1 96 aa12.91□□□□□ -0.34
NXT1-201ENST00000254998 PRR26Q8N8Z3 221 aa12.91□□□□□ -0.34
NXT1-201ENST00000254998 SPANXDQ9BXN6 97 aa12.91□□□□□ -0.34
NXT1-201ENST00000254998 SPANXCQ9NY87 97 aa12.91□□□□□ -0.34
NXT1-201ENST00000254998 KRTAP4-16G5E9R7 235 aaPredicted RBP12.9□□□□□ -0.34
NXT1-201ENST00000254998 PPDPFQ9H3Y8 114 aa12.89□□□□□ -0.35
NXT1-201ENST00000254998 SCGB1D1O95968 90 aa12.88□□□□□ -0.35
NXT1-201ENST00000254998 RPL13AP40429 203 aaKnown RBP12.87□□□□□ -0.35
NXT1-201ENST00000254998 S100A7L2Q5SY68 101 aa12.87□□□□□ -0.35
NXT1-201ENST00000254998 Q6ZVH6 145 aa12.87□□□□□ -0.35
NXT1-201ENST00000254998 IFITM1P13164 125 aa12.86□□□□□ -0.35
NXT1-201ENST00000254998 COPS9Q8WXC6 57 aa12.86□□□□□ -0.35
NXT1-201ENST00000254998 ETDCA0A1B0GVM5 59 aa12.85□□□□□ -0.35
NXT1-201ENST00000254998 LINC00518Q8N0U6 118 aa12.83□□□□□ -0.36
NXT1-201ENST00000254998 HIGD2AQ9BW72 106 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms