RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 C5orf42Q9H799 3197 aa10.17□□□□□ -0.78
UBE4B-201ENST00000253251 PRR34Q9NV39 138 aa10.16□□□□□ -0.78
UBE4B-201ENST00000253251 SMCR5Q8TEV8 140 aa10.16□□□□□ -0.78
UBE4B-201ENST00000253251 C16orf90A8MZG2 172 aa10.15□□□□□ -0.78
UBE4B-201ENST00000253251 TM2D3Q9BRN9 247 aa10.15□□□□□ -0.78
UBE4B-201ENST00000253251 HRCT1Q6UXD1 115 aa10.15□□□□□ -0.79
UBE4B-201ENST00000253251 ELOF1P60002 83 aaKnown RBP10.14□□□□□ -0.79
UBE4B-201ENST00000253251 WFDC13Q8IUB5 93 aa10.14□□□□□ -0.79
UBE4B-201ENST00000253251 COX7CP15954 63 aa10.14□□□□□ -0.79
UBE4B-201ENST00000253251 LITAFQ99732 161 aa10.13□□□□□ -0.79
UBE4B-201ENST00000253251 Q8N3U1 123 aa10.13□□□□□ -0.79
UBE4B-201ENST00000253251 HELZ2Q9BYK8 2649 aaKnown RBP10.13□□□□□ -0.79
UBE4B-201ENST00000253251 FAM236DA0A1B0GTK5 79 aa10.12□□□□□ -0.79
UBE4B-201ENST00000253251 FAM236CP0DP71 79 aa10.12□□□□□ -0.79
UBE4B-201ENST00000253251 PRLHP81277 87 aa10.12□□□□□ -0.79
UBE4B-201ENST00000253251 FLNAP21333 2647 aaKnown RBP10.11□□□□□ -0.79
UBE4B-201ENST00000253251 TRAV7A0A075B6U4 112 aa10.1□□□□□ -0.79
UBE4B-201ENST00000253251 WIPF1O43516 503 aa10.1□□□□□ -0.79
UBE4B-201ENST00000253251 CIRBP-AS1Q8TBR5 109 aa10.1□□□□□ -0.79
UBE4B-201ENST00000253251 CASC2Q6XLA1 102 aa10.1□□□□□ -0.79
UBE4B-201ENST00000253251 BPTFQ12830 3046 aa10.09□□□□□ -0.79
UBE4B-201ENST00000253251 A0A087WSZ3 146 aa10.08□□□□□ -0.8
UBE4B-201ENST00000253251 LIMD2Q9BT23 127 aa10.08□□□□□ -0.8
UBE4B-201ENST00000253251 Q6ZRX8 168 aa10.08□□□□□ -0.8
UBE4B-201ENST00000253251 Q6ZVQ6 151 aa10.08□□□□□ -0.8
UBE4B-201ENST00000253251 RTL8CO15255 209 aa10.07□□□□□ -0.8
UBE4B-201ENST00000253251 CXCL6P80162 114 aa10.07□□□□□ -0.8
UBE4B-201ENST00000253251 SEC61GP60059 68 aa10.06□□□□□ -0.8
UBE4B-201ENST00000253251 KIAA0087Q14695 138 aa10.06□□□□□ -0.8
UBE4B-201ENST00000253251 VPREB1P12018 145 aa10.06□□□□□ -0.8
UBE4B-201ENST00000253251 ITPR3Q14573 2671 aa10.06□□□□□ -0.8
UBE4B-201ENST00000253251 IGLV6-57P01721 117 aa10.05□□□□□ -0.8
UBE4B-201ENST00000253251 BRK1Q8WUW1 75 aa10.05□□□□□ -0.8
UBE4B-201ENST00000253251 LINC00846Q9NV44 126 aa10.05□□□□□ -0.8
UBE4B-201ENST00000253251 PRO0461Q9UI25 63 aa10.05□□□□□ -0.8
UBE4B-201ENST00000253251 PCNTO95613 3336 aa10.05□□□□□ -0.8
UBE4B-201ENST00000253251 Q6ZRP5 223 aa10.03□□□□□ -0.8
UBE4B-201ENST00000253251 FAM218AQ96MZ4 157 aa10.03□□□□□ -0.8
UBE4B-201ENST00000253251 V9GYY9 64 aa10.02□□□□□ -0.81
UBE4B-201ENST00000253251 LOC110117498A0A087WWA1 95 aa10.02□□□□□ -0.81
UBE4B-201ENST00000253251 TRBV7-7A0A0K0K1E9 115 aa10.02□□□□□ -0.81
UBE4B-201ENST00000253251 SMCPP49901 116 aaPredicted RBP10.02□□□□□ -0.81
UBE4B-201ENST00000253251 LINC01547P58512 204 aaPredicted RBP10.01□□□□□ -0.81
UBE4B-201ENST00000253251 Q8N9L7 120 aa10□□□□□ -0.81
UBE4B-201ENST00000253251 TLX1NBP0CAT3 122 aa9.99□□□□□ -0.81
UBE4B-201ENST00000253251 USP24Q9UPU5 2620 aa9.99□□□□□ -0.81
UBE4B-201ENST00000253251 BCE1O60756 84 aa9.99□□□□□ -0.81
UBE4B-201ENST00000253251 PHF5AQ7RTV0 110 aaKnown RBP9.99□□□□□ -0.81
UBE4B-201ENST00000253251 FAM30AQ9NZY2 134 aa9.98□□□□□ -0.81
UBE4B-201ENST00000253251 C15orf56Q8N910 161 aa9.98□□□□□ -0.81
UBE4B-201ENST00000253251 KCNQ1DNQ9H478 68 aa9.98□□□□□ -0.81
UBE4B-201ENST00000253251 CFAP46Q8IYW2 2715 aa9.98□□□□□ -0.81
UBE4B-201ENST00000253251 PLA2G2DQ9UNK4 145 aa9.98□□□□□ -0.81
UBE4B-201ENST00000253251 IGHV6-1A0A0B4J1U7 121 aa9.97□□□□□ -0.81
UBE4B-201ENST00000253251 ZNF575Q86XF7 245 aa9.97□□□□□ -0.81
UBE4B-201ENST00000253251 A0A087WVE0 104 aa9.97□□□□□ -0.81
UBE4B-201ENST00000253251 Q8NBF4 154 aa9.97□□□□□ -0.81
UBE4B-201ENST00000253251 CR1P17927 2039 aa9.96□□□□□ -0.81
UBE4B-201ENST00000253251 CDIP1Q9H305 208 aa9.96□□□□□ -0.81
UBE4B-201ENST00000253251 SNURFQ9Y675 71 aa9.96□□□□□ -0.81
UBE4B-201ENST00000253251 EPM2AB3EWF7 344 aa9.96□□□□□ -0.82
UBE4B-201ENST00000253251 HCG22E2RYF7 251 aa9.96□□□□□ -0.82
UBE4B-201ENST00000253251 Q6ZQT0 140 aa9.95□□□□□ -0.82
UBE4B-201ENST00000253251 IGLV1-50A0A075B6I6 118 aa9.94□□□□□ -0.82
UBE4B-201ENST00000253251 APLNQ9ULZ1 77 aa9.93□□□□□ -0.82
UBE4B-201ENST00000253251 CCDC179H3BU77 68 aa9.93□□□□□ -0.82
UBE4B-201ENST00000253251 MKI67P46013 3256 aaKnown RBP9.92□□□□□ -0.82
UBE4B-201ENST00000253251 LINC00208Q96KT6 92 aa9.92□□□□□ -0.82
UBE4B-201ENST00000253251 CRYGAP11844 174 aa9.91□□□□□ -0.82
UBE4B-201ENST00000253251 SVIPQ8NHG7 77 aa9.91□□□□□ -0.82
UBE4B-201ENST00000253251 LINC00476Q8WZB0 136 aa9.91□□□□□ -0.82
UBE4B-201ENST00000253251 LAMA3Q16787 3333 aa9.91□□□□□ -0.82
UBE4B-201ENST00000253251 MOBPQ13875 183 aa9.91□□□□□ -0.82
UBE4B-201ENST00000253251 C9orf163Q8N9P6 203 aa9.91□□□□□ -0.82
UBE4B-201ENST00000253251 LINC00528Q8N1L1 170 aa9.9□□□□□ -0.82
UBE4B-201ENST00000253251 SPTSSBQ8NFR3 76 aa9.9□□□□□ -0.82
UBE4B-201ENST00000253251 PRR15LQ9BU68 103 aa9.9□□□□□ -0.82
UBE4B-201ENST00000253251 FAM229AH3BQW9 127 aa9.89□□□□□ -0.83
UBE4B-201ENST00000253251 SERTAD4-AS1Q5TG53 156 aa9.89□□□□□ -0.83
UBE4B-201ENST00000253251 CHTF8P0CG12 524 aa9.89□□□□□ -0.83
UBE4B-201ENST00000253251 SMIM26A0A096LP01 95 aa9.88□□□□□ -0.83
UBE4B-201ENST00000253251 CNBPP62633 177 aaKnown RBP9.88□□□□□ -0.83
UBE4B-201ENST00000253251 TRBV7-4A0A0J9YYF1 115 aa9.88□□□□□ -0.83
UBE4B-201ENST00000253251 A0A087WTM6 91 aa9.88□□□□□ -0.83
UBE4B-201ENST00000253251 TP53AIP1Q9HCN2 124 aa9.87□□□□□ -0.83
UBE4B-201ENST00000253251 ATRQ13535 2644 aa9.86□□□□□ -0.83
UBE4B-201ENST00000253251 H0Y9P7 68 aa9.85□□□□□ -0.83
UBE4B-201ENST00000253251 MGAM2Q2M2H8 2515 aa9.85□□□□□ -0.83
UBE4B-201ENST00000253251 ST20-AS1Q8NBB2 130 aa9.85□□□□□ -0.83
UBE4B-201ENST00000253251 FAM168BA1KXE4 195 aa9.84□□□□□ -0.83
UBE4B-201ENST00000253251 TMEM254Q8TBM7 123 aa9.84□□□□□ -0.83
UBE4B-201ENST00000253251 hDV103S1A0JD37 113 aa9.84□□□□□ -0.83
UBE4B-201ENST00000253251 DEFB116Q30KQ4 102 aa9.84□□□□□ -0.83
UBE4B-201ENST00000253251 C9orf129Q5T035 196 aaKnown RBP9.83□□□□□ -0.84
UBE4B-201ENST00000253251 C1orf195Q5TG92 126 aa9.83□□□□□ -0.84
UBE4B-201ENST00000253251 MGAQ8IWI9 3026 aa9.83□□□□□ -0.84
UBE4B-201ENST00000253251 EIF4EBP3O60516 100 aaPredicted RBP9.83□□□□□ -0.84
UBE4B-201ENST00000253251 CENPEQ02224 2701 aa9.83□□□□□ -0.84
UBE4B-201ENST00000253251 SERP1Q9Y6X1 66 aa9.82□□□□□ -0.84
UBE4B-201ENST00000253251 AKAP13Q12802 2813 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 177.6 ms