RNA–Protein interactions for RNA: ENST00000252699.6

ACTN4-201, Transcript of actinin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTN4, Length 4,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-201ENST00000252699 FLNCQ14315 2725 aa11.69□□□□□ -0.54
ACTN4-201ENST00000252699 FRYLO94915 3013 aa11.68□□□□□ -0.54
ACTN4-201ENST00000252699 KRTAP10-11P60412 298 aa11.68□□□□□ -0.54
ACTN4-201ENST00000252699 TEX15Q9BXT5 2789 aa11.68□□□□□ -0.54
ACTN4-201ENST00000252699 STAB1Q9NY15 2570 aa11.67□□□□□ -0.54
ACTN4-201ENST00000252699 TNRC18O15417 2968 aaPredicted RBP11.67□□□□□ -0.54
ACTN4-201ENST00000252699 IGLV9-49A0A0B4J1Y8 123 aa11.67□□□□□ -0.54
ACTN4-201ENST00000252699 C10orf25Q5T742 122 aa11.66□□□□□ -0.54
ACTN4-201ENST00000252699 DNAH14Q0VDD8 3507 aa11.66□□□□□ -0.54
ACTN4-201ENST00000252699 C6orf48Q9UBA6 75 aa11.66□□□□□ -0.54
ACTN4-201ENST00000252699 LINC00588Q9Y4M8 146 aa11.64□□□□□ -0.55
ACTN4-201ENST00000252699 XGP55808 180 aa11.64□□□□□ -0.55
ACTN4-201ENST00000252699 SOSTDC1Q6X4U4 206 aa11.64□□□□□ -0.55
ACTN4-201ENST00000252699 HRCT1Q6UXD1 115 aa11.64□□□□□ -0.55
ACTN4-201ENST00000252699 COL6A5A8TX70 2615 aa11.63□□□□□ -0.55
ACTN4-201ENST00000252699 SETXQ7Z333 2677 aaKnown RBP11.63□□□□□ -0.55
ACTN4-201ENST00000252699 K7EIL1 84 aa11.63□□□□□ -0.55
ACTN4-201ENST00000252699 LINC00575Q6W349 94 aa11.62□□□□□ -0.55
ACTN4-201ENST00000252699 SPINK6Q6UWN8 80 aa11.62□□□□□ -0.55
ACTN4-201ENST00000252699 PRYO14603 147 aa11.62□□□□□ -0.55
ACTN4-201ENST00000252699 C22orf24Q9Y442 160 aa11.61□□□□□ -0.55
ACTN4-201ENST00000252699 SS18L2Q9UHA2 77 aa11.61□□□□□ -0.55
ACTN4-201ENST00000252699 C1orf137Q5JT78 98 aa11.61□□□□□ -0.55
ACTN4-201ENST00000252699 FAM240AA0A1B0GVK7 77 aa11.6□□□□□ -0.55
ACTN4-201ENST00000252699 C20orf197Q8N268 126 aa11.6□□□□□ -0.55
ACTN4-201ENST00000252699 IMUPQ9GZP8 106 aa11.59□□□□□ -0.55
ACTN4-201ENST00000252699 ATMQ13315 3056 aa11.59□□□□□ -0.55
ACTN4-201ENST00000252699 BOD1L1Q8NFC6 3051 aa11.58□□□□□ -0.56
ACTN4-201ENST00000252699 DMXL2Q8TDJ6 3036 aa11.58□□□□□ -0.56
ACTN4-201ENST00000252699 PRLHP81277 87 aa11.56□□□□□ -0.56
ACTN4-201ENST00000252699 IGKV4-1P06312 121 aa11.56□□□□□ -0.56
ACTN4-201ENST00000252699 CR1P17927 2039 aa11.56□□□□□ -0.56
ACTN4-201ENST00000252699 LINC00612Q8N6U2 182 aa11.56□□□□□ -0.56
ACTN4-201ENST00000252699 WFDC13Q8IUB5 93 aa11.54□□□□□ -0.56
ACTN4-201ENST00000252699 UQCRQO14949 82 aa11.54□□□□□ -0.56
ACTN4-201ENST00000252699 DNAH10OSP0CZ25 163 aa11.54□□□□□ -0.56
ACTN4-201ENST00000252699 NBDYA0A0U1RRE5 68 aa11.54□□□□□ -0.56
ACTN4-201ENST00000252699 Q6JHZ5 121 aa11.54□□□□□ -0.56
ACTN4-201ENST00000252699 LINC00167Q96N53 147 aa11.53□□□□□ -0.56
ACTN4-201ENST00000252699 TMEM258P61165 79 aa11.53□□□□□ -0.56
ACTN4-201ENST00000252699 GCN1Q92616 2671 aaKnown RBP11.53□□□□□ -0.56
ACTN4-201ENST00000252699 Q9BRP9 147 aa11.52□□□□□ -0.57
ACTN4-201ENST00000252699 SPATA3Q8NHX4 192 aa11.51□□□□□ -0.57
ACTN4-201ENST00000252699 NOTCH1P46531 2555 aa11.51□□□□□ -0.57
ACTN4-201ENST00000252699 LITAFQ99732 161 aa11.51□□□□□ -0.57
ACTN4-201ENST00000252699 FREM2Q5SZK8 3169 aa11.5□□□□□ -0.57
ACTN4-201ENST00000252699 EYSQ5T1H1 3165 aa11.5□□□□□ -0.57
ACTN4-201ENST00000252699 COL12A1Q99715 3063 aa11.5□□□□□ -0.57
ACTN4-201ENST00000252699 GVQW2A0A096LPI5 108 aaPredicted RBP11.49□□□□□ -0.57
ACTN4-201ENST00000252699 ZNF575Q86XF7 245 aa11.49□□□□□ -0.57
ACTN4-201ENST00000252699 UBR5O95071 2799 aaPredicted RBP11.49□□□□□ -0.57
ACTN4-201ENST00000252699 SMCR5Q8TEV8 140 aa11.48□□□□□ -0.57
ACTN4-201ENST00000252699 ADGRG4Q8IZF6 3080 aa11.48□□□□□ -0.57
ACTN4-201ENST00000252699 BAHCC1Q9P281 2608 aa11.48□□□□□ -0.57
ACTN4-201ENST00000252699 CHKB-CPT1BH3BT56 60 aa11.48□□□□□ -0.57
ACTN4-201ENST00000252699 FAM19A3Q7Z5A8 133 aa11.47□□□□□ -0.57
ACTN4-201ENST00000252699 FAM218AQ96MZ4 157 aa11.47□□□□□ -0.57
ACTN4-201ENST00000252699 CIRBP-AS1Q8TBR5 109 aa11.47□□□□□ -0.57
ACTN4-201ENST00000252699 REV3LO60673 3130 aa11.47□□□□□ -0.57
ACTN4-201ENST00000252699 SERP2Q8N6R1 65 aa11.46□□□□□ -0.57
ACTN4-201ENST00000252699 C3orf22Q8N5N4 141 aa11.46□□□□□ -0.58
ACTN4-201ENST00000252699 SMCPP49901 116 aaPredicted RBP11.45□□□□□ -0.58
ACTN4-201ENST00000252699 PRR34Q9NV39 138 aa11.45□□□□□ -0.58
ACTN4-201ENST00000252699 A0A087WSZ3 146 aa11.45□□□□□ -0.58
ACTN4-201ENST00000252699 NBEAQ8NFP9 2946 aa11.44□□□□□ -0.58
ACTN4-201ENST00000252699 A0A087WVE0 104 aa11.44□□□□□ -0.58
ACTN4-201ENST00000252699 LINC00846Q9NV44 126 aa11.44□□□□□ -0.58
ACTN4-201ENST00000252699 TM2D3Q9BRN9 247 aa11.43□□□□□ -0.58
ACTN4-201ENST00000252699 Q6ZRP5 223 aa11.43□□□□□ -0.58
ACTN4-201ENST00000252699 SPTBN5Q9NRC6 3674 aaKnown RBP11.42□□□□□ -0.58
ACTN4-201ENST00000252699 KIAA0087Q14695 138 aa11.42□□□□□ -0.58
ACTN4-201ENST00000252699 WWC2-AS2Q96NR7 200 aa11.42□□□□□ -0.58
ACTN4-201ENST00000252699 Q6Q795 121 aa11.42□□□□□ -0.58
ACTN4-201ENST00000252699 PRO0461Q9UI25 63 aa11.41□□□□□ -0.58
ACTN4-201ENST00000252699 EIF4EBP3O60516 100 aaPredicted RBP11.4□□□□□ -0.58
ACTN4-201ENST00000252699 J3KT08 172 aa11.4□□□□□ -0.59
ACTN4-201ENST00000252699 C16orf90A8MZG2 172 aa11.39□□□□□ -0.59
ACTN4-201ENST00000252699 ELOF1P60002 83 aaKnown RBP11.39□□□□□ -0.59
ACTN4-201ENST00000252699 Q6ZVQ6 151 aa11.39□□□□□ -0.59
ACTN4-201ENST00000252699 PHF5AQ7RTV0 110 aaKnown RBP11.39□□□□□ -0.59
ACTN4-201ENST00000252699 TACC2O95359 2948 aa11.38□□□□□ -0.59
ACTN4-201ENST00000252699 TRBV7-6A0A0J9YX20 115 aa11.38□□□□□ -0.59
ACTN4-201ENST00000252699 CHTF8P0CG12 524 aa11.38□□□□□ -0.59
ACTN4-201ENST00000252699 RTL8CO15255 209 aa11.38□□□□□ -0.59
ACTN4-201ENST00000252699 SNURFQ9Y675 71 aa11.38□□□□□ -0.59
ACTN4-201ENST00000252699 VPREB1P12018 145 aa11.37□□□□□ -0.59
ACTN4-201ENST00000252699 COX7CP15954 63 aa11.37□□□□□ -0.59
ACTN4-201ENST00000252699 SPEGQ15772 3267 aa11.37□□□□□ -0.59
ACTN4-201ENST00000252699 ITPR1Q14643 2758 aa11.36□□□□□ -0.59
ACTN4-201ENST00000252699 Q6ZRX8 168 aa11.35□□□□□ -0.59
ACTN4-201ENST00000252699 DEFB116Q30KQ4 102 aa11.35□□□□□ -0.59
ACTN4-201ENST00000252699 DMXL1Q9Y485 3027 aa11.35□□□□□ -0.59
ACTN4-201ENST00000252699 FAM30AQ9NZY2 134 aa11.35□□□□□ -0.59
ACTN4-201ENST00000252699 FAM236DA0A1B0GTK5 79 aa11.34□□□□□ -0.59
ACTN4-201ENST00000252699 FAM236CP0DP71 79 aa11.34□□□□□ -0.59
ACTN4-201ENST00000252699 C5orf47Q569G3 176 aa11.34□□□□□ -0.59
ACTN4-201ENST00000252699 ZZEF1O43149 2961 aa11.33□□□□□ -0.6
ACTN4-201ENST00000252699 C15orf56Q8N910 161 aa11.33□□□□□ -0.6
ACTN4-201ENST00000252699 CDIP1Q9H305 208 aa11.33□□□□□ -0.6
ACTN4-201ENST00000252699 CCDC179H3BU77 68 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms