RNA–Protein interactions for RNA: ENST00000252456.6

CNN1-201, Transcript of calponin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNN1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-201ENST00000252456 MYMXA0A1B0GTQ4 84 aa8.93□□□□□ -0.98
CNN1-201ENST00000252456 TMEM223A0PJW6 202 aa8.93□□□□□ -0.98
CNN1-201ENST00000252456 TLX1NBP0CAT3 122 aa8.93□□□□□ -0.98
CNN1-201ENST00000252456 TOMM7Q9P0U1 55 aa8.93□□□□□ -0.98
CNN1-201ENST00000252456 TRBV30A0A0K0K1B3 111 aa8.92□□□□□ -0.98
CNN1-201ENST00000252456 Q6ZRP5 223 aa8.92□□□□□ -0.98
CNN1-201ENST00000252456 LRP1Q07954 4544 aaKnown RBP8.92□□□□□ -0.98
CNN1-201ENST00000252456 A0A1W2PNN7 141 aa8.91□□□□□ -0.98
CNN1-201ENST00000252456 C9orf116Q5BN46 136 aaPredicted RBP8.91□□□□□ -0.98
CNN1-201ENST00000252456 TSPEAR-AS2P59090 65 aa8.91□□□□□ -0.98
CNN1-201ENST00000252456 DMBT1Q9UGM3 2413 aaPredicted RBP8.9□□□□□ -0.98
CNN1-201ENST00000252456 ZNF815PA8K554 130 aa8.9□□□□□ -0.99
CNN1-201ENST00000252456 LEPROTO15243 131 aa8.9□□□□□ -0.99
CNN1-201ENST00000252456 PRSS2P07478 247 aa8.9□□□□□ -0.99
CNN1-201ENST00000252456 SPINK8P0C7L1 97 aa8.9□□□□□ -0.99
CNN1-201ENST00000252456 C6orf226Q5I0X4 101 aa8.9□□□□□ -0.99
CNN1-201ENST00000252456 FAT3Q8TDW7 4589 aa8.89□□□□□ -0.99
CNN1-201ENST00000252456 J3QQQ9 107 aa8.88□□□□□ -0.99
CNN1-201ENST00000252456 CKS1BP61024 79 aa8.88□□□□□ -0.99
CNN1-201ENST00000252456 TAL2Q16559 108 aa8.88□□□□□ -0.99
CNN1-201ENST00000252456 PLEKHB2Q96CS7 222 aa8.88□□□□□ -0.99
CNN1-201ENST00000252456 IGLV5-39A0A0G2JS06 123 aa8.87□□□□□ -0.99
CNN1-201ENST00000252456 NDUFC2-KCTD14E9PQ53 114 aa8.87□□□□□ -0.99
CNN1-201ENST00000252456 LGALS3P17931 250 aaKnown RBP8.87□□□□□ -0.99
CNN1-201ENST00000252456 COX7B2Q8TF08 81 aa8.87□□□□□ -0.99
CNN1-201ENST00000252456 C7orf33Q8WU49 177 aa8.87□□□□□ -0.99
CNN1-201ENST00000252456 FAM168BA1KXE4 195 aa8.87□□□□□ -0.99
CNN1-201ENST00000252456 GAGE2EQ4V326 116 aa8.87□□□□□ -0.99
CNN1-201ENST00000252456 KRTAP7-1Q8IUC3 87 aa8.87□□□□□ -0.99
CNN1-201ENST00000252456 GAGE2DQ9UEU5 116 aa8.87□□□□□ -0.99
CNN1-201ENST00000252456 H3BRM9 83 aa8.86□□□□□ -0.99
CNN1-201ENST00000252456 CXCL5P42830 114 aa8.86□□□□□ -0.99
CNN1-201ENST00000252456 C9orf129Q5T035 196 aaKnown RBP8.86□□□□□ -0.99
CNN1-201ENST00000252456 HERC1Q15751 4861 aa8.86□□□□□ -0.99
CNN1-201ENST00000252456 A6NDN8 102 aa8.85□□□□□ -0.99
CNN1-201ENST00000252456 PRR3P79522 188 aaKnown RBP8.85□□□□□ -0.99
CNN1-201ENST00000252456 TAX1BP3O14907 124 aa8.84□□□□□ -0.99
CNN1-201ENST00000252456 FXYD2P54710 66 aa8.84□□□□□ -0.99
CNN1-201ENST00000252456 SCGB1D4Q6XE38 83 aa8.84□□□□□ -0.99
CNN1-201ENST00000252456 CEND1Q8N111 149 aa8.84□□□□□ -0.99
CNN1-201ENST00000252456 HIST1H4GQ99525 98 aa8.83□□□□□ -1
CNN1-201ENST00000252456 Q6ZVH6 145 aa8.83□□□□□ -1
CNN1-201ENST00000252456 PHF5AQ7RTV0 110 aaKnown RBP8.83□□□□□ -1
CNN1-201ENST00000252456 SPANXB1Q9NS25 103 aaPredicted RBP8.82□□□□□ -1
CNN1-201ENST00000252456 KRTAP29-1A8MX34 341 aaPredicted RBP8.81□□□□□ -1
CNN1-201ENST00000252456 FAM19A5Q7Z5A7 132 aaPredicted RBP8.81□□□□□ -1
CNN1-201ENST00000252456 XAGE1AQ9HD64 81 aa8.81□□□□□ -1
CNN1-201ENST00000252456 KRTAP11-1Q8IUC1 163 aa8.8□□□□□ -1
CNN1-201ENST00000252456 SERTAD4-AS1Q5TG53 156 aa8.79□□□□□ -1
CNN1-201ENST00000252456 NDUFA12Q9UI09 145 aa8.79□□□□□ -1
CNN1-201ENST00000252456 PSORS1C2Q9UIG4 136 aa8.79□□□□□ -1
CNN1-201ENST00000252456 A0A0J9YXY3 114 aa8.78□□□□□ -1
CNN1-201ENST00000252456 SMIM13P0DJ93 91 aa8.78□□□□□ -1
CNN1-201ENST00000252456 SRSF9Q13242 221 aaKnown RBP eCLIP8.78□□□□□ -1
CNN1-201ENST00000252456 M0QXV9 152 aa8.77□□□□□ -1.01
CNN1-201ENST00000252456 ZNF625Q96I27 306 aaPredicted RBP8.77□□□□□ -1.01
CNN1-201ENST00000252456 NHP2Q9NX24 153 aaKnown RBP8.77□□□□□ -1.01
CNN1-201ENST00000252456 A0A1B0GWB2 263 aa8.76□□□□□ -1.01
CNN1-201ENST00000252456 C9orf118A6NHY6 69 aa8.76□□□□□ -1.01
CNN1-201ENST00000252456 TMEM238C9JI98 176 aa8.76□□□□□ -1.01
CNN1-201ENST00000252456 K7ERJ3 54 aa8.76□□□□□ -1.01
CNN1-201ENST00000252456 OXTP01178 125 aa8.76□□□□□ -1.01
CNN1-201ENST00000252456 TMEM238LA0A1B0GVL6 79 aa8.75□□□□□ -1.01
CNN1-201ENST00000252456 A6NJY4 79 aa8.75□□□□□ -1.01
CNN1-201ENST00000252456 RAB37Q96AX2 223 aa8.75□□□□□ -1.01
CNN1-201ENST00000252456 LITAFQ99732 161 aa8.75□□□□□ -1.01
CNN1-201ENST00000252456 ERG28Q9UKR5 140 aa8.74□□□□□ -1.01
CNN1-201ENST00000252456 J3QL48 77 aa8.73□□□□□ -1.01
CNN1-201ENST00000252456 TIMM17BO60830 172 aa8.73□□□□□ -1.01
CNN1-201ENST00000252456 PFN2P35080 140 aa8.73□□□□□ -1.01
CNN1-201ENST00000252456 SPANXDQ9BXN6 97 aa8.73□□□□□ -1.01
CNN1-201ENST00000252456 SPANXCQ9NY87 97 aa8.73□□□□□ -1.01
CNN1-201ENST00000252456 C22orf24Q9Y442 160 aa8.73□□□□□ -1.01
CNN1-201ENST00000252456 VAMP3Q15836 100 aa8.72□□□□□ -1.01
CNN1-201ENST00000252456 C1orf137Q5JT78 98 aa8.72□□□□□ -1.01
CNN1-201ENST00000252456 PLA2G2DQ9UNK4 145 aa8.72□□□□□ -1.01
CNN1-201ENST00000252456 H3BUT2 72 aa8.72□□□□□ -1.01
CNN1-201ENST00000252456 SFTA2Q6UW10 78 aa8.72□□□□□ -1.01
CNN1-201ENST00000252456 SPINK6Q6UWN8 80 aa8.72□□□□□ -1.01
CNN1-201ENST00000252456 NAA38Q9BRA0 125 aaKnown RBP8.72□□□□□ -1.01
CNN1-201ENST00000252456 TNXBP22105 4242 aa8.71□□□□□ -1.01
CNN1-201ENST00000252456 MT1HL1P0DM35 61 aa8.71□□□□□ -1.02
CNN1-201ENST00000252456 COX17Q14061 63 aa8.71□□□□□ -1.02
CNN1-201ENST00000252456 UBE2V1Q13404 147 aa8.7□□□□□ -1.02
CNN1-201ENST00000252456 ADAMTSL4-AS1Q5T5F5 129 aa8.7□□□□□ -1.02
CNN1-201ENST00000252456 MUSTN1Q8IVN3 82 aa8.7□□□□□ -1.02
CNN1-201ENST00000252456 SND1-IT1Q9HBX3 110 aa8.7□□□□□ -1.02
CNN1-201ENST00000252456 IGLV5-37A0A075B6J1 123 aa8.69□□□□□ -1.02
CNN1-201ENST00000252456 A0A1W2PPM0 123 aa8.69□□□□□ -1.02
CNN1-201ENST00000252456 HERV-K104P63124 156 aa8.69□□□□□ -1.02
CNN1-201ENST00000252456 UBE2BP63146 152 aa8.69□□□□□ -1.02
CNN1-201ENST00000252456 IGLV7-43P04211 117 aa8.69□□□□□ -1.02
CNN1-201ENST00000252456 RPL24P83731 157 aaKnown RBP8.69□□□□□ -1.02
CNN1-201ENST00000252456 MRPL55Q7Z7F7 128 aaKnown RBP8.69□□□□□ -1.02
CNN1-201ENST00000252456 Q8NDZ9 215 aa8.69□□□□□ -1.02
CNN1-201ENST00000252456 A4D1N5 150 aa8.68□□□□□ -1.02
CNN1-201ENST00000252456 CFC1BP0CG36 223 aa8.68□□□□□ -1.02
CNN1-201ENST00000252456 CFC1P0CG37 223 aa8.68□□□□□ -1.02
CNN1-201ENST00000252456 IFITM1P13164 125 aa8.67□□□□□ -1.02
CNN1-201ENST00000252456 VPREB1P12018 145 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms