RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 CHCHD10Q8WYQ3 142 aaPredicted RBP11.39□□□□□ -0.59
CDKN1A-201ENST00000244741 C22orf24Q9Y442 160 aa11.39□□□□□ -0.59
CDKN1A-201ENST00000244741 A0A1B0GV72 72 aa11.38□□□□□ -0.59
CDKN1A-201ENST00000244741 KIAA0087Q14695 138 aa11.38□□□□□ -0.59
CDKN1A-201ENST00000244741 REG3AQ06141 175 aa11.38□□□□□ -0.59
CDKN1A-201ENST00000244741 Q9HAA7 133 aa11.38□□□□□ -0.59
CDKN1A-201ENST00000244741 C3orf84H3BNL1 204 aa11.37□□□□□ -0.59
CDKN1A-201ENST00000244741 SNCGO76070 127 aa11.37□□□□□ -0.59
CDKN1A-201ENST00000244741 KLK12Q9UKR0 248 aa11.37□□□□□ -0.59
CDKN1A-201ENST00000244741 FAM240AA0A1B0GVK7 77 aa11.36□□□□□ -0.59
CDKN1A-201ENST00000244741 A0A087WYN8 130 aa11.35□□□□□ -0.59
CDKN1A-201ENST00000244741 OR13C6PQ8NH95 151 aa11.35□□□□□ -0.59
CDKN1A-201ENST00000244741 LY6G6CO95867 125 aa11.34□□□□□ -0.59
CDKN1A-201ENST00000244741 UPK3BQ9BT76 320 aa11.34□□□□□ -0.59
CDKN1A-201ENST00000244741 MALP21145 153 aa11.33□□□□□ -0.6
CDKN1A-201ENST00000244741 GAGE2BQ13066 116 aa11.33□□□□□ -0.6
CDKN1A-201ENST00000244741 GAGE2EQ4V326 116 aa11.33□□□□□ -0.6
CDKN1A-201ENST00000244741 TTC32Q5I0X7 151 aa11.33□□□□□ -0.6
CDKN1A-201ENST00000244741 CFAP161Q6P656 301 aa11.33□□□□□ -0.6
CDKN1A-201ENST00000244741 GAGE2DQ9UEU5 116 aa11.33□□□□□ -0.6
CDKN1A-201ENST00000244741 H0YGX0 51 aa11.33□□□□□ -0.6
CDKN1A-201ENST00000244741 LINC01556Q5JQF7 62 aa11.33□□□□□ -0.6
CDKN1A-201ENST00000244741 DNAH10OSP0CZ25 163 aa11.32□□□□□ -0.6
CDKN1A-201ENST00000244741 PRR3P79522 188 aaKnown RBP11.31□□□□□ -0.6
CDKN1A-201ENST00000244741 C9orf116Q5BN46 136 aaPredicted RBP11.31□□□□□ -0.6
CDKN1A-201ENST00000244741 DNAH10Q8IVF4 4471 aa11.31□□□□□ -0.6
CDKN1A-201ENST00000244741 KRTAP1-5Q9BYS1 174 aa11.31□□□□□ -0.6
CDKN1A-201ENST00000244741 M0R2N4 97 aa11.3□□□□□ -0.6
CDKN1A-201ENST00000244741 CXCL5P42830 114 aa11.3□□□□□ -0.6
CDKN1A-201ENST00000244741 COX17Q14061 63 aa11.29□□□□□ -0.6
CDKN1A-201ENST00000244741 ENHOQ6UWT2 76 aa11.29□□□□□ -0.6
CDKN1A-201ENST00000244741 DNAL4O96015 105 aa11.28□□□□□ -0.6
CDKN1A-201ENST00000244741 LECT2O14960 151 aa11.28□□□□□ -0.6
CDKN1A-201ENST00000244741 Q6Q795 121 aa11.28□□□□□ -0.6
CDKN1A-201ENST00000244741 HYDINQ4G0P3 5121 aa11.27□□□□□ -0.6
CDKN1A-201ENST00000244741 ALMS1Q8TCU4 4167 aa11.27□□□□□ -0.6
CDKN1A-201ENST00000244741 ACYP1P07311 99 aa11.27□□□□□ -0.6
CDKN1A-201ENST00000244741 C6orf223Q8N319 242 aa11.27□□□□□ -0.6
CDKN1A-201ENST00000244741 LINC00476Q8WZB0 136 aa11.27□□□□□ -0.6
CDKN1A-201ENST00000244741 C9orf129Q5T035 196 aaKnown RBP11.26□□□□□ -0.61
CDKN1A-201ENST00000244741 C10orf25Q5T742 122 aa11.26□□□□□ -0.61
CDKN1A-201ENST00000244741 ANAPC13Q9BS18 74 aa11.26□□□□□ -0.61
CDKN1A-201ENST00000244741 PRR34Q9NV39 138 aa11.26□□□□□ -0.61
CDKN1A-201ENST00000244741 LINC00526Q96FQ7 95 aa11.26□□□□□ -0.61
CDKN1A-201ENST00000244741 NDUFC2O95298 119 aa11.25□□□□□ -0.61
CDKN1A-201ENST00000244741 UNQ6190/PRO20217Q6UXQ8 127 aa11.25□□□□□ -0.61
CDKN1A-201ENST00000244741 Q8NDZ9 215 aa11.25□□□□□ -0.61
CDKN1A-201ENST00000244741 SLPIP03973 132 aa11.24□□□□□ -0.61
CDKN1A-201ENST00000244741 SPAG11BQ08648 103 aa11.24□□□□□ -0.61
CDKN1A-201ENST00000244741 SMCR5Q8TEV8 140 aa11.24□□□□□ -0.61
CDKN1A-201ENST00000244741 INAFM2P0DMQ5 153 aa11.24□□□□□ -0.61
CDKN1A-201ENST00000244741 NDUFV3P56181 108 aaKnown RBP11.24□□□□□ -0.61
CDKN1A-201ENST00000244741 SACSQ9NZJ4 4579 aa11.23□□□□□ -0.61
CDKN1A-201ENST00000244741 NBDYA0A0U1RRE5 68 aa11.23□□□□□ -0.61
CDKN1A-201ENST00000244741 DNAH2Q9P225 4427 aa11.22□□□□□ -0.61
CDKN1A-201ENST00000244741 IGKV2D-24A0A075B6R9 120 aa11.22□□□□□ -0.61
CDKN1A-201ENST00000244741 KMT2CQ8NEZ4 4911 aaKnown RBP11.22□□□□□ -0.61
CDKN1A-201ENST00000244741 NCR3O14931 201 aa11.21□□□□□ -0.62
CDKN1A-201ENST00000244741 GAGE2AQ6NT46 116 aa11.21□□□□□ -0.62
CDKN1A-201ENST00000244741 TMEM126AQ9H061 195 aa11.21□□□□□ -0.62
CDKN1A-201ENST00000244741 TRBV7-7A0A0K0K1E9 115 aa11.2□□□□□ -0.62
CDKN1A-201ENST00000244741 SDIM1Q6ZPB5 146 aa11.2□□□□□ -0.62
CDKN1A-201ENST00000244741 OBSCN-AS1Q96MR7 158 aa11.2□□□□□ -0.62
CDKN1A-201ENST00000244741 C14orf132Q9NPU4 83 aa11.19□□□□□ -0.62
CDKN1A-201ENST00000244741 LINC00643Q86TS7 51 aa11.18□□□□□ -0.62
CDKN1A-201ENST00000244741 C1orf43Q9BWL3 253 aa11.18□□□□□ -0.62
CDKN1A-201ENST00000244741 LINC00167Q96N53 147 aa11.17□□□□□ -0.62
CDKN1A-201ENST00000244741 ORMDL1Q9P0S3 153 aa11.17□□□□□ -0.62
CDKN1A-201ENST00000244741 Q8N814 137 aa11.17□□□□□ -0.62
CDKN1A-201ENST00000244741 DNAH6Q9C0G6 4158 aa11.16□□□□□ -0.62
CDKN1A-201ENST00000244741 C6orf99Q4VX62 202 aa11.15□□□□□ -0.62
CDKN1A-201ENST00000244741 S100A7L2Q5SY68 101 aa11.15□□□□□ -0.62
CDKN1A-201ENST00000244741 KRTAP26-1Q6PEX3 210 aa11.15□□□□□ -0.62
CDKN1A-201ENST00000244741 A0A1B0GX51 115 aa11.14□□□□□ -0.63
CDKN1A-201ENST00000244741 C6orf48Q9UBA6 75 aa11.14□□□□□ -0.63
CDKN1A-201ENST00000244741 Q6ZR54 194 aa11.14□□□□□ -0.63
CDKN1A-201ENST00000244741 GVQW2A0A096LPI5 108 aaPredicted RBP11.13□□□□□ -0.63
CDKN1A-201ENST00000244741 IMUPQ9GZP8 106 aa11.12□□□□□ -0.63
CDKN1A-201ENST00000244741 LCE6AA0A183 80 aa11.11□□□□□ -0.63
CDKN1A-201ENST00000244741 PSCAO43653 123 aa11.11□□□□□ -0.63
CDKN1A-201ENST00000244741 RPL18AQ02543 176 aaKnown RBP11.11□□□□□ -0.63
CDKN1A-201ENST00000244741 HIGD2BQ4VC39 106 aa11.1□□□□□ -0.63
CDKN1A-201ENST00000244741 FRAS1Q86XX4 4008 aa11.1□□□□□ -0.63
CDKN1A-201ENST00000244741 IGLV6-57P01721 117 aa11.1□□□□□ -0.63
CDKN1A-201ENST00000244741 XAGE1AQ9HD64 81 aa11.1□□□□□ -0.63
CDKN1A-201ENST00000244741 LINC00575Q6W349 94 aa11.09□□□□□ -0.63
CDKN1A-201ENST00000244741 RMI2Q96E14 147 aa11.09□□□□□ -0.63
CDKN1A-201ENST00000244741 CCDC179H3BU77 68 aa11.09□□□□□ -0.63
CDKN1A-201ENST00000244741 LINC00846Q9NV44 126 aa11.08□□□□□ -0.64
CDKN1A-201ENST00000244741 ZNF561-AS1K7EIQ3 104 aa11.07□□□□□ -0.64
CDKN1A-201ENST00000244741 TMEM256-PLSCR3K7ERE1 68 aa11.07□□□□□ -0.64
CDKN1A-201ENST00000244741 FAM236AA0A1B0GUQ0 79 aa11.07□□□□□ -0.64
CDKN1A-201ENST00000244741 FAM236BA0A1B0GV22 79 aa11.07□□□□□ -0.64
CDKN1A-201ENST00000244741 C1orf134Q5TEV5 83 aa11.07□□□□□ -0.64
CDKN1A-201ENST00000244741 Q6ZRN7 208 aaPredicted RBP11.07□□□□□ -0.64
CDKN1A-201ENST00000244741 RYR2Q92736 4967 aa11.06□□□□□ -0.64
CDKN1A-201ENST00000244741 CAMK2N2Q96S95 79 aa11.06□□□□□ -0.64
CDKN1A-201ENST00000244741 TRBV10-3A0A0K0K1G6 114 aa11.05□□□□□ -0.64
CDKN1A-201ENST00000244741 CCKP06307 115 aa11.05□□□□□ -0.64
CDKN1A-201ENST00000244741 C15orf56Q8N910 161 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms