RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 ATP5EP56381 51 aaPredicted RBP13.82□□□□□ -0.2
HOXC13-201ENST00000243056 LINC00167Q96N53 147 aa13.81□□□□□ -0.2
HOXC13-201ENST00000243056 TM2D3Q9BRN9 247 aa13.81□□□□□ -0.2
HOXC13-201ENST00000243056 NDUFC1O43677 76 aa13.81□□□□□ -0.2
HOXC13-201ENST00000243056 CMYA5Q8N3K9 4069 aa13.81□□□□□ -0.2
HOXC13-201ENST00000243056 TRBV7-4A0A0J9YYF1 115 aa13.8□□□□□ -0.2
HOXC13-201ENST00000243056 LINC01547P58512 204 aaPredicted RBP13.8□□□□□ -0.2
HOXC13-201ENST00000243056 PMAIP1Q13794 54 aa13.8□□□□□ -0.2
HOXC13-201ENST00000243056 MIFP14174 115 aa13.79□□□□□ -0.2
HOXC13-201ENST00000243056 LINC00158P58513 81 aa13.79□□□□□ -0.2
HOXC13-201ENST00000243056 IBA57-AS1B1ANH7 110 aa13.77□□□□□ -0.21
HOXC13-201ENST00000243056 M0R2N4 97 aa13.77□□□□□ -0.21
HOXC13-201ENST00000243056 ANK2Q01484 3957 aa13.77□□□□□ -0.21
HOXC13-201ENST00000243056 HAMPP81172 84 aa13.75□□□□□ -0.21
HOXC13-201ENST00000243056 C6orf226Q5I0X4 101 aa13.75□□□□□ -0.21
HOXC13-201ENST00000243056 PAX4O43316 350 aa13.74□□□□□ -0.21
HOXC13-201ENST00000243056 OXLD1Q5BKU9 147 aa13.74□□□□□ -0.21
HOXC13-201ENST00000243056 NBEAL1Q6ZS30 2694 aa13.74□□□□□ -0.21
HOXC13-201ENST00000243056 COX7B2Q8TF08 81 aa13.74□□□□□ -0.21
HOXC13-201ENST00000243056 PRR15Q8IV56 129 aa13.73□□□□□ -0.21
HOXC13-201ENST00000243056 Q8N814 137 aa13.73□□□□□ -0.21
HOXC13-201ENST00000243056 C19orf73Q9NVV2 129 aa13.73□□□□□ -0.21
HOXC13-201ENST00000243056 TOMM7Q9P0U1 55 aa13.73□□□□□ -0.21
HOXC13-201ENST00000243056 TMEM256-PLSCR3K7ERE1 68 aa13.73□□□□□ -0.21
HOXC13-201ENST00000243056 MGAM2Q2M2H8 2515 aa13.73□□□□□ -0.21
HOXC13-201ENST00000243056 IGHV3-53P01767 116 aa13.72□□□□□ -0.21
HOXC13-201ENST00000243056 MDFIQ99750 246 aa13.72□□□□□ -0.21
HOXC13-201ENST00000243056 PLAC8L1A1L4L8 177 aa13.72□□□□□ -0.21
HOXC13-201ENST00000243056 Q6ZQT0 140 aa13.72□□□□□ -0.21
HOXC13-201ENST00000243056 Q6ZVQ6 151 aa13.72□□□□□ -0.21
HOXC13-201ENST00000243056 Q8N3U1 123 aa13.72□□□□□ -0.21
HOXC13-201ENST00000243056 TRBV6-4A0A1B0GX49 114 aa13.71□□□□□ -0.22
HOXC13-201ENST00000243056 STHQ8IWL8 128 aa13.71□□□□□ -0.22
HOXC13-201ENST00000243056 A0A087WZ39 114 aa13.7□□□□□ -0.22
HOXC13-201ENST00000243056 ESRGQ1W209 222 aa13.7□□□□□ -0.22
HOXC13-201ENST00000243056 TMEM254Q8TBM7 123 aa13.69□□□□□ -0.22
HOXC13-201ENST00000243056 CDC42SE2Q9NRR3 84 aa13.69□□□□□ -0.22
HOXC13-201ENST00000243056 Q6ZRU5 148 aa13.69□□□□□ -0.22
HOXC13-201ENST00000243056 C9orf66Q5T8R8 295 aa13.68□□□□□ -0.22
HOXC13-201ENST00000243056 NANOS2P60321 138 aaKnown RBP13.67□□□□□ -0.22
HOXC13-201ENST00000243056 NREPQ16612 68 aa13.66□□□□□ -0.22
HOXC13-201ENST00000243056 NTM-AS1Q6ZSK4 140 aa13.66□□□□□ -0.22
HOXC13-201ENST00000243056 C1orf158Q8N1D5 194 aa13.66□□□□□ -0.22
HOXC13-201ENST00000243056 C11orf68Q9H3H3 251 aaKnown RBP13.65□□□□□ -0.22
HOXC13-201ENST00000243056 GIG44P09565 113 aaPredicted RBP13.64□□□□□ -0.23
HOXC13-201ENST00000243056 SCXQ7RTU7 201 aa13.64□□□□□ -0.23
HOXC13-201ENST00000243056 RETNQ9HD89 108 aa13.64□□□□□ -0.23
HOXC13-201ENST00000243056 K7EQD1 137 aa13.64□□□□□ -0.23
HOXC13-201ENST00000243056 TRBV10-1A0A0K0K1A3 114 aa13.63□□□□□ -0.23
HOXC13-201ENST00000243056 A8MTW9 85 aa13.63□□□□□ -0.23
HOXC13-201ENST00000243056 CXCL6P80162 114 aa13.63□□□□□ -0.23
HOXC13-201ENST00000243056 Q6ZTC4 211 aa13.62□□□□□ -0.23
HOXC13-201ENST00000243056 LOC110117498A0A087WWA1 95 aa13.61□□□□□ -0.23
HOXC13-201ENST00000243056 KRTAP10-11P60412 298 aa13.61□□□□□ -0.23
HOXC13-201ENST00000243056 PRR3P79522 188 aaKnown RBP13.6□□□□□ -0.23
HOXC13-201ENST00000243056 PRYO14603 147 aa13.59□□□□□ -0.23
HOXC13-201ENST00000243056 FUSP35637 526 aaKnown RBP eCLIP13.59□□□□□ -0.23
HOXC13-201ENST00000243056 PRB2P02812 416 aaPredicted RBP13.59□□□□□ -0.23
HOXC13-201ENST00000243056 CD164Q04900 197 aa13.57□□□□□ -0.24
HOXC13-201ENST00000243056 DNHD1Q96M86 4753 aa13.57□□□□□ -0.24
HOXC13-201ENST00000243056 IGKV3OR2-268A0A0C4DH90 116 aa13.56□□□□□ -0.24
HOXC13-201ENST00000243056 BPY2O14599 106 aa13.56□□□□□ -0.24
HOXC13-201ENST00000243056 INSP01308 110 aa13.56□□□□□ -0.24
HOXC13-201ENST00000243056 ERC2-IT1O76042 136 aa13.55□□□□□ -0.24
HOXC13-201ENST00000243056 C6orf223Q8N319 242 aa13.55□□□□□ -0.24
HOXC13-201ENST00000243056 ZNF561-AS1K7EIQ3 104 aa13.54□□□□□ -0.24
HOXC13-201ENST00000243056 LAMTOR3Q9UHA4 124 aa13.54□□□□□ -0.24
HOXC13-201ENST00000243056 LRCOL1A6NCL2 159 aa13.53□□□□□ -0.24
HOXC13-201ENST00000243056 DAD1P61803 113 aa13.53□□□□□ -0.24
HOXC13-201ENST00000243056 Q6ZRP5 223 aa13.53□□□□□ -0.24
HOXC13-201ENST00000243056 CMC4P56277 68 aaPredicted RBP13.52□□□□□ -0.25
HOXC13-201ENST00000243056 CSNK1G2-AS1Q8NCQ2 148 aa13.52□□□□□ -0.25
HOXC13-201ENST00000243056 IGHV4-30-4P0DP06 118 aa13.5□□□□□ -0.25
HOXC13-201ENST00000243056 TENM3Q9P273 2699 aa13.5□□□□□ -0.25
HOXC13-201ENST00000243056 IGHV3OR16-9A0A0B4J2B5 98 aa13.5□□□□□ -0.25
HOXC13-201ENST00000243056 hDV103S1A0JD37 113 aa13.5□□□□□ -0.25
HOXC13-201ENST00000243056 C6orf99Q4VX62 202 aa13.5□□□□□ -0.25
HOXC13-201ENST00000243056 UBE2L6O14933 153 aa13.49□□□□□ -0.25
HOXC13-201ENST00000243056 DEFB135Q30KP9 77 aa13.49□□□□□ -0.25
HOXC13-201ENST00000243056 DNAH3Q8TD57 4116 aa13.49□□□□□ -0.25
HOXC13-201ENST00000243056 LINC00575Q6W349 94 aa13.49□□□□□ -0.25
HOXC13-201ENST00000243056 HIGD2AQ9BW72 106 aa13.49□□□□□ -0.25
HOXC13-201ENST00000243056 DEFB4AO15263 64 aa13.48□□□□□ -0.25
HOXC13-201ENST00000243056 Q1T7F1 81 aa13.48□□□□□ -0.25
HOXC13-201ENST00000243056 OCR1Q9BZK8 76 aa13.48□□□□□ -0.25
HOXC13-201ENST00000243056 Q8N9L7 120 aa13.47□□□□□ -0.25
HOXC13-201ENST00000243056 CD164L2Q6UWJ8 174 aa13.46□□□□□ -0.25
HOXC13-201ENST00000243056 PSPHP1O15172 72 aa13.45□□□□□ -0.26
HOXC13-201ENST00000243056 NOP10Q9NPE3 64 aaKnown RBP13.45□□□□□ -0.26
HOXC13-201ENST00000243056 MUC7Q8TAX7 377 aa13.44□□□□□ -0.26
HOXC13-201ENST00000243056 IGLV4-60A0A075B6I1 120 aa13.43□□□□□ -0.26
HOXC13-201ENST00000243056 TRGV1A0A0A0MS02 117 aa13.42□□□□□ -0.26
HOXC13-201ENST00000243056 A8MU10 97 aa13.42□□□□□ -0.26
HOXC13-201ENST00000243056 EGFEM1PQ0D2K5 195 aa13.42□□□□□ -0.26
HOXC13-201ENST00000243056 Q8NDZ9 215 aa13.41□□□□□ -0.26
HOXC13-201ENST00000243056 IGKV4-1P06312 121 aa13.39□□□□□ -0.27
HOXC13-201ENST00000243056 X6R8D5 127 aa13.39□□□□□ -0.27
HOXC13-201ENST00000243056 PDE6GP18545 87 aa13.39□□□□□ -0.27
HOXC13-201ENST00000243056 C1orf64Q8NEQ6 169 aa13.39□□□□□ -0.27
HOXC13-201ENST00000243056 Q6ZQY7 126 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms