RNA–Protein interactions for RNA: ENST00000239878.8

UFM1-201, Transcript of ubiquitin fold modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFM1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-201ENST00000239878 CLEC19AQ6UXS0 136 aa2.55□□□□□ -2
UFM1-201ENST00000239878 TMEM14CQ9P0S9 112 aa2.55□□□□□ -2
UFM1-201ENST00000239878 COL7A1Q02388 2944 aa2.54□□□□□ -2
UFM1-201ENST00000239878 TRAV7A0A075B6U4 112 aa2.54□□□□□ -2
UFM1-201ENST00000239878 TRAV10A0A0B4J240 114 aa2.54□□□□□ -2
UFM1-201ENST00000239878 SDHAF1A6NFY7 115 aa2.54□□□□□ -2
UFM1-201ENST00000239878 C9orf47Q6ZRZ4 202 aa2.54□□□□□ -2
UFM1-201ENST00000239878 CHCHD10Q8WYQ3 142 aaPredicted RBP2.54□□□□□ -2
UFM1-201ENST00000239878 OPRPNQ99935 248 aaPredicted RBP2.54□□□□□ -2
UFM1-201ENST00000239878 LINC00588Q9Y4M8 146 aa2.54□□□□□ -2
UFM1-201ENST00000239878 SMAD5-AS1Q9Y6J3 95 aa2.54□□□□□ -2
UFM1-201ENST00000239878 IGKV3D-20A0A0C4DH25 116 aa2.54□□□□□ -2
UFM1-201ENST00000239878 LRCOL1A6NCL2 159 aa2.54□□□□□ -2
UFM1-201ENST00000239878 IGHV3-23P01764 117 aa2.54□□□□□ -2
UFM1-201ENST00000239878 MIAQ16674 131 aa2.54□□□□□ -2
UFM1-201ENST00000239878 ESRGQ1W209 222 aa2.54□□□□□ -2
UFM1-201ENST00000239878 ZNF876PQ49A33 203 aa2.54□□□□□ -2
UFM1-201ENST00000239878 IGFL4Q6B9Z1 124 aa2.54□□□□□ -2
UFM1-201ENST00000239878 CSMD3Q7Z407 3707 aa2.54□□□□□ -2
UFM1-201ENST00000239878 ALMS1Q8TCU4 4167 aa2.54□□□□□ -2
UFM1-201ENST00000239878 A0A0J9YX75 114 aa2.53□□□□□ -2
UFM1-201ENST00000239878 PSPHP1O15172 72 aa2.53□□□□□ -2
UFM1-201ENST00000239878 Q6ZRP5 223 aa2.53□□□□□ -2
UFM1-201ENST00000239878 S4R3C0 116 aa2.53□□□□□ -2
UFM1-201ENST00000239878 K7EQG2 157 aa2.53□□□□□ -2
UFM1-201ENST00000239878 GIG44P09565 113 aaPredicted RBP2.53□□□□□ -2
UFM1-201ENST00000239878 MIFP14174 115 aa2.53□□□□□ -2
UFM1-201ENST00000239878 TIMM17AQ99595 171 aa2.53□□□□□ -2
UFM1-201ENST00000239878 NBEAL1Q6ZS30 2694 aa2.53□□□□□ -2
UFM1-201ENST00000239878 JMJD1CQ15652 2540 aa2.53□□□□□ -2.01
UFM1-201ENST00000239878 TMEM256-PLSCR3K7ERE1 68 aa2.53□□□□□ -2.01
UFM1-201ENST00000239878 NCR3O14931 201 aa2.53□□□□□ -2.01
UFM1-201ENST00000239878 BCE1O60756 84 aa2.53□□□□□ -2.01
UFM1-201ENST00000239878 IGHV3-30-3P0DP02 117 aa2.53□□□□□ -2.01
UFM1-201ENST00000239878 STARD9Q9P2P6 4700 aa2.52□□□□□ -2.01
UFM1-201ENST00000239878 ZNF73O43830 326 aaPredicted RBP2.52□□□□□ -2.01
UFM1-201ENST00000239878 ATP5EP56381 51 aaPredicted RBP2.52□□□□□ -2.01
UFM1-201ENST00000239878 PRR3P79522 188 aaKnown RBP2.52□□□□□ -2.01
UFM1-201ENST00000239878 KRTAP19-4Q3LI73 84 aa2.52□□□□□ -2.01
UFM1-201ENST00000239878 ZNF625Q96I27 306 aaPredicted RBP2.52□□□□□ -2.01
UFM1-201ENST00000239878 OBSCN-AS1Q96MR7 158 aa2.52□□□□□ -2.01
UFM1-201ENST00000239878 A0A0J9YXV3 536 aa2.52□□□□□ -2.01
UFM1-201ENST00000239878 F6UB75 175 aa2.52□□□□□ -2.01
UFM1-201ENST00000239878 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.52□□□□□ -2.01
UFM1-201ENST00000239878 LYPD1Q8N2G4 141 aa2.52□□□□□ -2.01
UFM1-201ENST00000239878 TRBV7-4A0A0J9YYF1 115 aa2.51□□□□□ -2.01
UFM1-201ENST00000239878 SPANXN1Q5VSR9 72 aa2.51□□□□□ -2.01
UFM1-201ENST00000239878 Q6ZTC4 211 aa2.51□□□□□ -2.01
UFM1-201ENST00000239878 CSNK1G2-AS1Q8NCQ2 148 aa2.51□□□□□ -2.01
UFM1-201ENST00000239878 B9D2Q9BPU9 175 aa2.51□□□□□ -2.01
UFM1-201ENST00000239878 RHPN1-AS1Q9BWJ2 59 aa2.51□□□□□ -2.01
UFM1-201ENST00000239878 A0A087WYN8 130 aa2.51□□□□□ -2.01
UFM1-201ENST00000239878 Q1T7F1 81 aa2.51□□□□□ -2.01
UFM1-201ENST00000239878 C11orf72Q8NBR9 251 aa2.51□□□□□ -2.01
UFM1-201ENST00000239878 IGHV3-38A0A0C4DH36 116 aa2.51□□□□□ -2.01
UFM1-201ENST00000239878 PRAC2D3DTV9 90 aa2.51□□□□□ -2.01
UFM1-201ENST00000239878 MGPP08493 103 aa2.51□□□□□ -2.01
UFM1-201ENST00000239878 SYCNQ0VAF6 134 aa2.51□□□□□ -2.01
UFM1-201ENST00000239878 TMEM141Q96I45 108 aa2.51□□□□□ -2.01
UFM1-201ENST00000239878 NDUFA12Q9UI09 145 aa2.51□□□□□ -2.01
UFM1-201ENST00000239878 IGLV5-45A0A087WSX0 123 aa2.5□□□□□ -2.01
UFM1-201ENST00000239878 M0R381 172 aa2.5□□□□□ -2.01
UFM1-201ENST00000239878 NDUFC1O43677 76 aa2.5□□□□□ -2.01
UFM1-201ENST00000239878 PHLDA3Q9Y5J5 127 aa2.5□□□□□ -2.01
UFM1-201ENST00000239878 IGLV5-37A0A075B6J1 123 aa2.5□□□□□ -2.01
UFM1-201ENST00000239878 IGHV4-4A0A075B6R2 117 aa2.5□□□□□ -2.01
UFM1-201ENST00000239878 TRAV22A0A0B4J277 110 aa2.5□□□□□ -2.01
UFM1-201ENST00000239878 PDE6HQ13956 83 aa2.5□□□□□ -2.01
UFM1-201ENST00000239878 FAM19A3Q7Z5A8 133 aa2.5□□□□□ -2.01
UFM1-201ENST00000239878 LINC00467Q9BRT7 94 aa2.5□□□□□ -2.01
UFM1-201ENST00000239878 IGHV3OR16-12A0A075B7B8 117 aa2.49□□□□□ -2.01
UFM1-201ENST00000239878 A8MUN3 132 aa2.49□□□□□ -2.01
UFM1-201ENST00000239878 C16orf90A8MZG2 172 aa2.49□□□□□ -2.01
UFM1-201ENST00000239878 SLPIP03973 132 aa2.49□□□□□ -2.01
UFM1-201ENST00000239878 C10orf25Q5T742 122 aa2.49□□□□□ -2.01
UFM1-201ENST00000239878 ATP5EP2Q5VTU8 51 aa2.49□□□□□ -2.01
UFM1-201ENST00000239878 MIR7-3HGQ8N6C7 128 aa2.49□□□□□ -2.01
UFM1-201ENST00000239878 LINC00308Q8TCZ7 52 aa2.49□□□□□ -2.01
UFM1-201ENST00000239878 hDV103S1A0JD37 113 aa2.49□□□□□ -2.01
UFM1-201ENST00000239878 A6NN06 94 aa2.49□□□□□ -2.01
UFM1-201ENST00000239878 K7EQD1 137 aa2.49□□□□□ -2.01
UFM1-201ENST00000239878 FUSP35637 526 aaKnown RBP eCLIP2.49□□□□□ -2.01
UFM1-201ENST00000239878 TMEM254Q8TBM7 123 aa2.49□□□□□ -2.01
UFM1-201ENST00000239878 WFDC10AQ9H1F0 79 aa2.49□□□□□ -2.01
UFM1-201ENST00000239878 VPS13DQ5THJ4 4388 aa2.49□□□□□ -2.01
UFM1-201ENST00000239878 IGHV1OR15-1A0A075B7D0 117 aa2.48□□□□□ -2.01
UFM1-201ENST00000239878 IGHV3-35A0A0C4DH35 117 aa2.48□□□□□ -2.01
UFM1-201ENST00000239878 TRBV10-3A0A0K0K1G6 114 aa2.48□□□□□ -2.01
UFM1-201ENST00000239878 IGKV2-29A2NJV5 120 aaPredicted RBP2.48□□□□□ -2.01
UFM1-201ENST00000239878 CMC4P56277 68 aaPredicted RBP2.48□□□□□ -2.01
UFM1-201ENST00000239878 Q6ZTI0 123 aa2.48□□□□□ -2.01
UFM1-201ENST00000239878 LINC00337Q8N6G1 96 aa2.48□□□□□ -2.01
UFM1-201ENST00000239878 SPTSSBQ8NFR3 76 aa2.48□□□□□ -2.01
UFM1-201ENST00000239878 FRAS1Q86XX4 4008 aa2.48□□□□□ -2.01
UFM1-201ENST00000239878 IGHV3OR16-8A0A075B7F1 116 aa2.48□□□□□ -2.01
UFM1-201ENST00000239878 TRAV21A0A0B4J279 112 aa2.48□□□□□ -2.01
UFM1-201ENST00000239878 POLR2KP53803 58 aaKnown RBP2.48□□□□□ -2.01
UFM1-201ENST00000239878 UBE2BP63146 152 aa2.48□□□□□ -2.01
UFM1-201ENST00000239878 RNASE13Q5GAN3 156 aaKnown RBP2.48□□□□□ -2.01
UFM1-201ENST00000239878 PHF5AQ7RTV0 110 aaKnown RBP2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms