RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 ESRGQ1W209 222 aa10.84□□□□□ -0.67
UBE3D-201ENST00000237186 PKD1L1Q8TDX9 2849 aa10.84□□□□□ -0.67
UBE3D-201ENST00000237186 TTC32Q5I0X7 151 aa10.83□□□□□ -0.68
UBE3D-201ENST00000237186 LINC00526Q96FQ7 95 aa10.83□□□□□ -0.68
UBE3D-201ENST00000237186 Q8N814 137 aa10.83□□□□□ -0.68
UBE3D-201ENST00000237186 ORMDL1Q9P0S3 153 aa10.83□□□□□ -0.68
UBE3D-201ENST00000237186 C6orf48Q9UBA6 75 aa10.83□□□□□ -0.68
UBE3D-201ENST00000237186 TRBV7-7A0A0K0K1E9 115 aa10.82□□□□□ -0.68
UBE3D-201ENST00000237186 IGLV6-57P01721 117 aa10.81□□□□□ -0.68
UBE3D-201ENST00000237186 C11orf45Q8TAV5 145 aa10.81□□□□□ -0.68
UBE3D-201ENST00000237186 LINC01556Q5JQF7 62 aa10.81□□□□□ -0.68
UBE3D-201ENST00000237186 C9orf129Q5T035 196 aaKnown RBP10.81□□□□□ -0.68
UBE3D-201ENST00000237186 LINC00643Q86TS7 51 aa10.81□□□□□ -0.68
UBE3D-201ENST00000237186 DEFB131BA0A096LNP1 70 aa10.8□□□□□ -0.68
UBE3D-201ENST00000237186 NCR3O14931 201 aa10.8□□□□□ -0.68
UBE3D-201ENST00000237186 S100A7L2Q5SY68 101 aa10.8□□□□□ -0.68
UBE3D-201ENST00000237186 IMUPQ9GZP8 106 aa10.8□□□□□ -0.68
UBE3D-201ENST00000237186 SLPIP03973 132 aa10.79□□□□□ -0.68
UBE3D-201ENST00000237186 ZNF561-AS1K7EIQ3 104 aa10.78□□□□□ -0.68
UBE3D-201ENST00000237186 C6orf99Q4VX62 202 aa10.78□□□□□ -0.68
UBE3D-201ENST00000237186 SMCR5Q8TEV8 140 aa10.78□□□□□ -0.68
UBE3D-201ENST00000237186 C2orf48Q96LS8 159 aa10.78□□□□□ -0.68
UBE3D-201ENST00000237186 TMEM256-PLSCR3K7ERE1 68 aa10.77□□□□□ -0.69
UBE3D-201ENST00000237186 NDUFV3P56181 108 aaKnown RBP10.77□□□□□ -0.69
UBE3D-201ENST00000237186 F8WDY8 70 aa10.76□□□□□ -0.69
UBE3D-201ENST00000237186 GAGE2AQ6NT46 116 aa10.76□□□□□ -0.69
UBE3D-201ENST00000237186 LINC00575Q6W349 94 aa10.76□□□□□ -0.69
UBE3D-201ENST00000237186 C15orf56Q8N910 161 aa10.76□□□□□ -0.69
UBE3D-201ENST00000237186 CAMK2N2Q96S95 79 aa10.76□□□□□ -0.69
UBE3D-201ENST00000237186 ANAPC13Q9BS18 74 aa10.76□□□□□ -0.69
UBE3D-201ENST00000237186 C14orf132Q9NPU4 83 aa10.76□□□□□ -0.69
UBE3D-201ENST00000237186 NHLRC4P0CG21 123 aaPredicted RBP10.75□□□□□ -0.69
UBE3D-201ENST00000237186 JMJD7-PLA2G4BH0Y9G9 81 aa10.74□□□□□ -0.69
UBE3D-201ENST00000237186 RPL18AQ02543 176 aaKnown RBP10.74□□□□□ -0.69
UBE3D-201ENST00000237186 C1orf43Q9BWL3 253 aa10.74□□□□□ -0.69
UBE3D-201ENST00000237186 DNAH10OSP0CZ25 163 aa10.74□□□□□ -0.69
UBE3D-201ENST00000237186 HIGD2BQ4VC39 106 aa10.73□□□□□ -0.69
UBE3D-201ENST00000237186 TENM3Q9P273 2699 aa10.73□□□□□ -0.69
UBE3D-201ENST00000237186 XAGE1AQ9HD64 81 aa10.72□□□□□ -0.69
UBE3D-201ENST00000237186 Q6ZRU5 148 aa10.72□□□□□ -0.69
UBE3D-201ENST00000237186 HUWE1Q7Z6Z7 4374 aaKnown RBP10.72□□□□□ -0.69
UBE3D-201ENST00000237186 NOTCH1P46531 2555 aa10.71□□□□□ -0.69
UBE3D-201ENST00000237186 hADV29S1A0JD25 119 aa10.71□□□□□ -0.69
UBE3D-201ENST00000237186 NDUFC2-KCTD14E9PQ53 114 aa10.71□□□□□ -0.69
UBE3D-201ENST00000237186 PRB2P02812 416 aaPredicted RBP10.71□□□□□ -0.69
UBE3D-201ENST00000237186 MDFIQ99750 246 aa10.71□□□□□ -0.69
UBE3D-201ENST00000237186 TM2D3Q9BRN9 247 aa10.71□□□□□ -0.69
UBE3D-201ENST00000237186 TRAV10A0A0B4J240 114 aa10.7□□□□□ -0.7
UBE3D-201ENST00000237186 TRBV10-3A0A0K0K1G6 114 aa10.7□□□□□ -0.7
UBE3D-201ENST00000237186 VPREB1P12018 145 aa10.7□□□□□ -0.7
UBE3D-201ENST00000237186 DNAH1Q9P2D7 4330 aa10.7□□□□□ -0.7
UBE3D-201ENST00000237186 CCKP06307 115 aa10.7□□□□□ -0.7
UBE3D-201ENST00000237186 IGKV2D-24A0A075B6R9 120 aa10.69□□□□□ -0.7
UBE3D-201ENST00000237186 TRAV23DV6A0A075B6W5 121 aa10.69□□□□□ -0.7
UBE3D-201ENST00000237186 TRBV7-6A0A0J9YX20 115 aa10.68□□□□□ -0.7
UBE3D-201ENST00000237186 H3BQ85 93 aa10.68□□□□□ -0.7
UBE3D-201ENST00000237186 M0R378 163 aa10.67□□□□□ -0.7
UBE3D-201ENST00000237186 LINC00846Q9NV44 126 aa10.67□□□□□ -0.7
UBE3D-201ENST00000237186 DIRC1Q969H9 104 aa10.66□□□□□ -0.7
UBE3D-201ENST00000237186 K7EIL1 84 aa10.66□□□□□ -0.7
UBE3D-201ENST00000237186 ZNF73O43830 326 aaPredicted RBP10.66□□□□□ -0.7
UBE3D-201ENST00000237186 NBEAL1Q6ZS30 2694 aa10.65□□□□□ -0.7
UBE3D-201ENST00000237186 SYCNQ0VAF6 134 aa10.65□□□□□ -0.7
UBE3D-201ENST00000237186 LINC00588Q9Y4M8 146 aa10.64□□□□□ -0.71
UBE3D-201ENST00000237186 ELOF1P60002 83 aaKnown RBP10.64□□□□□ -0.71
UBE3D-201ENST00000237186 Q6ZRP5 223 aa10.64□□□□□ -0.71
UBE3D-201ENST00000237186 MGAM2Q2M2H8 2515 aa10.63□□□□□ -0.71
UBE3D-201ENST00000237186 Q6JHZ5 121 aa10.63□□□□□ -0.71
UBE3D-201ENST00000237186 COX7BP24311 80 aa10.62□□□□□ -0.71
UBE3D-201ENST00000237186 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.61□□□□□ -0.71
UBE3D-201ENST00000237186 TLX1NBP0CAT3 122 aa10.61□□□□□ -0.71
UBE3D-201ENST00000237186 Q6ZQY7 126 aa10.61□□□□□ -0.71
UBE3D-201ENST00000237186 MRAPQ8TCY5 172 aa10.61□□□□□ -0.71
UBE3D-201ENST00000237186 LOC110117498A0A087WWA1 95 aa10.6□□□□□ -0.71
UBE3D-201ENST00000237186 FAM236AA0A1B0GUQ0 79 aa10.6□□□□□ -0.71
UBE3D-201ENST00000237186 FAM236BA0A1B0GV22 79 aa10.6□□□□□ -0.71
UBE3D-201ENST00000237186 GHRHP01286 108 aa10.6□□□□□ -0.71
UBE3D-201ENST00000237186 RBM3P98179 157 aaKnown RBP10.6□□□□□ -0.71
UBE3D-201ENST00000237186 UPK3BQ9BT76 320 aa10.59□□□□□ -0.71
UBE3D-201ENST00000237186 Q6ZQT0 140 aa10.57□□□□□ -0.72
UBE3D-201ENST00000237186 PLA2G2DQ9UNK4 145 aa10.57□□□□□ -0.72
UBE3D-201ENST00000237186 PDE6GP18545 87 aa10.57□□□□□ -0.72
UBE3D-201ENST00000237186 HIST1H4AP62805 103 aaKnown RBP10.57□□□□□ -0.72
UBE3D-201ENST00000237186 RMI2Q96E14 147 aa10.57□□□□□ -0.72
UBE3D-201ENST00000237186 CCDC179H3BU77 68 aa10.56□□□□□ -0.72
UBE3D-201ENST00000237186 LINC00528Q8N1L1 170 aa10.56□□□□□ -0.72
UBE3D-201ENST00000237186 LAMTOR3Q9UHA4 124 aa10.56□□□□□ -0.72
UBE3D-201ENST00000237186 USP17L23D6RBM5 183 aa10.54□□□□□ -0.72
UBE3D-201ENST00000237186 KCNQ1DNQ9H478 68 aa10.54□□□□□ -0.72
UBE3D-201ENST00000237186 ATP5EP2Q5VTU8 51 aa10.53□□□□□ -0.72
UBE3D-201ENST00000237186 IGKV3D-7A0A0C4DH55 119 aa10.53□□□□□ -0.72
UBE3D-201ENST00000237186 DSCR8Q96T75 97 aa10.53□□□□□ -0.72
UBE3D-201ENST00000237186 IGLV5-37A0A075B6J1 123 aa10.52□□□□□ -0.73
UBE3D-201ENST00000237186 DNAH9Q9NYC9 4486 aa10.52□□□□□ -0.73
UBE3D-201ENST00000237186 CASC10Q5T4H9 136 aa10.51□□□□□ -0.73
UBE3D-201ENST00000237186 SERTAD4-AS1Q5TG53 156 aa10.51□□□□□ -0.73
UBE3D-201ENST00000237186 NKAPP1Q8N9T2 125 aa10.51□□□□□ -0.73
UBE3D-201ENST00000237186 C7orf33Q8WU49 177 aa10.51□□□□□ -0.73
UBE3D-201ENST00000237186 UBL5Q9BZL1 73 aa10.51□□□□□ -0.73
UBE3D-201ENST00000237186 B5MCH6 92 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms