RNA–Protein interactions for RNA: ENST00000236273.8

SYF2-201, Transcript of SYF2 pre-mRNA splicing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYF2, Length 1,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYF2-201ENST00000236273 SMIM13P0DJ93 91 aa13.64□□□□□ -0.23
SYF2-201ENST00000236273 HERV-K104P63124 156 aa13.64□□□□□ -0.23
SYF2-201ENST00000236273 MRPL55Q7Z7F7 128 aaKnown RBP13.64□□□□□ -0.23
SYF2-201ENST00000236273 A0A0U1RRA0 63 aa13.63□□□□□ -0.23
SYF2-201ENST00000236273 LINC00158P58513 81 aa13.63□□□□□ -0.23
SYF2-201ENST00000236273 UBE2BP63146 152 aa13.63□□□□□ -0.23
SYF2-201ENST00000236273 LINC00167Q96N53 147 aa13.63□□□□□ -0.23
SYF2-201ENST00000236273 MYMXA0A1B0GTQ4 84 aa13.62□□□□□ -0.23
SYF2-201ENST00000236273 VPREB1P12018 145 aa13.62□□□□□ -0.23
SYF2-201ENST00000236273 HERVK_113P61574 105 aa13.62□□□□□ -0.23
SYF2-201ENST00000236273 LBHQ53QV2 105 aaPredicted RBP13.62□□□□□ -0.23
SYF2-201ENST00000236273 E9PLD3 99 aa13.61□□□□□ -0.23
SYF2-201ENST00000236273 IGLV7-43P04211 117 aa13.61□□□□□ -0.23
SYF2-201ENST00000236273 KRTDAPP60985 99 aa13.6□□□□□ -0.23
SYF2-201ENST00000236273 HIST3H2BBQ8N257 126 aa13.6□□□□□ -0.23
SYF2-201ENST00000236273 TNXBP22105 4242 aa13.58□□□□□ -0.24
SYF2-201ENST00000236273 J3QL48 77 aa13.58□□□□□ -0.24
SYF2-201ENST00000236273 MT1HL1P0DM35 61 aa13.58□□□□□ -0.24
SYF2-201ENST00000236273 MEIG1Q5JSS6 88 aa13.58□□□□□ -0.24
SYF2-201ENST00000236273 MIR7-3HGQ8N6C7 128 aa13.57□□□□□ -0.24
SYF2-201ENST00000236273 GAGE10A6NGK3 116 aa13.56□□□□□ -0.24
SYF2-201ENST00000236273 RPL37AP8A6NKH3 93 aa13.56□□□□□ -0.24
SYF2-201ENST00000236273 LGALS3P17931 250 aaKnown RBP13.56□□□□□ -0.24
SYF2-201ENST00000236273 NMUP48645 174 aa13.56□□□□□ -0.24
SYF2-201ENST00000236273 NKAPP1Q8N9T2 125 aa13.55□□□□□ -0.24
SYF2-201ENST00000236273 LINC00587B1AMM8 73 aa13.54□□□□□ -0.24
SYF2-201ENST00000236273 HIST1H2BLQ99880 126 aa13.54□□□□□ -0.24
SYF2-201ENST00000236273 IGKV2D-26A0A0A0MRZ7 120 aa13.53□□□□□ -0.24
SYF2-201ENST00000236273 RPL24P83731 157 aaKnown RBP13.53□□□□□ -0.24
SYF2-201ENST00000236273 LINC01600Q96MT4 127 aa13.52□□□□□ -0.25
SYF2-201ENST00000236273 IGLV1-50A0A075B6I6 118 aa13.51□□□□□ -0.25
SYF2-201ENST00000236273 LOC107984156A0A0G2JMH3 177 aa13.51□□□□□ -0.25
SYF2-201ENST00000236273 ARL17AQ8IVW1 177 aa13.51□□□□□ -0.25
SYF2-201ENST00000236273 DAND5Q8N907 189 aa13.51□□□□□ -0.25
SYF2-201ENST00000236273 A0A0J9YXY3 114 aa13.5□□□□□ -0.25
SYF2-201ENST00000236273 IGKV2-28A0A075B6P5 120 aa13.48□□□□□ -0.25
SYF2-201ENST00000236273 BCE1O60756 84 aa13.48□□□□□ -0.25
SYF2-201ENST00000236273 IGKV2D-28P01615 120 aa13.48□□□□□ -0.25
SYF2-201ENST00000236273 SNRPEP62304 92 aaKnown RBP13.48□□□□□ -0.25
SYF2-201ENST00000236273 ADAMTSL4-AS1Q5T5F5 129 aa13.48□□□□□ -0.25
SYF2-201ENST00000236273 BOD1L2Q8IYS8 172 aa13.48□□□□□ -0.25
SYF2-201ENST00000236273 TTTY13Q9BZ97 58 aa13.48□□□□□ -0.25
SYF2-201ENST00000236273 H0Y9J4 135 aa13.47□□□□□ -0.25
SYF2-201ENST00000236273 ZNF861PO60384 105 aa13.47□□□□□ -0.25
SYF2-201ENST00000236273 S100A6P06703 90 aa13.47□□□□□ -0.25
SYF2-201ENST00000236273 REG3GQ6UW15 175 aa13.47□□□□□ -0.25
SYF2-201ENST00000236273 ATOH7Q8N100 152 aa13.47□□□□□ -0.25
SYF2-201ENST00000236273 C20orf202A1L168 122 aa13.46□□□□□ -0.25
SYF2-201ENST00000236273 S100A2P29034 98 aa13.46□□□□□ -0.25
SYF2-201ENST00000236273 ANKRD39Q53RE8 183 aa13.46□□□□□ -0.25
SYF2-201ENST00000236273 DIRC1Q969H9 104 aa13.46□□□□□ -0.25
SYF2-201ENST00000236273 C5orf52A6NGY3 159 aa13.45□□□□□ -0.26
SYF2-201ENST00000236273 EIF4EBP3O60516 100 aaPredicted RBP13.45□□□□□ -0.26
SYF2-201ENST00000236273 KRTAP10-8P60410 259 aa13.45□□□□□ -0.26
SYF2-201ENST00000236273 LITAFQ99732 161 aa13.45□□□□□ -0.26
SYF2-201ENST00000236273 M0R378 163 aa13.44□□□□□ -0.26
SYF2-201ENST00000236273 KRTAP13-1Q8IUC0 172 aa13.44□□□□□ -0.26
SYF2-201ENST00000236273 TMEM238C9JI98 176 aa13.43□□□□□ -0.26
SYF2-201ENST00000236273 SOSTDC1Q6X4U4 206 aa13.43□□□□□ -0.26
SYF2-201ENST00000236273 KRTAP1-4P0C5Y4 121 aa13.42□□□□□ -0.26
SYF2-201ENST00000236273 TMEM126AQ9H061 195 aa13.41□□□□□ -0.26
SYF2-201ENST00000236273 ZNF815PA8K554 130 aa13.4□□□□□ -0.26
SYF2-201ENST00000236273 NCR3O14931 201 aa13.39□□□□□ -0.27
SYF2-201ENST00000236273 TIMM17BO60830 172 aa13.39□□□□□ -0.27
SYF2-201ENST00000236273 RPL28P46779 137 aaKnown RBP13.38□□□□□ -0.27
SYF2-201ENST00000236273 AKR1D1P51857 326 aa13.38□□□□□ -0.27
SYF2-201ENST00000236273 NPC2P61916 151 aa13.37□□□□□ -0.27
SYF2-201ENST00000236273 PCP2Q8IVA1 136 aa13.36□□□□□ -0.27
SYF2-201ENST00000236273 TRBV10-3A0A0K0K1G6 114 aa13.35□□□□□ -0.27
SYF2-201ENST00000236273 NDUFC2O95298 119 aa13.35□□□□□ -0.27
SYF2-201ENST00000236273 KCNQ1DNQ9H478 68 aa13.35□□□□□ -0.27
SYF2-201ENST00000236273 TRBV10-2A0A0K0K1G8 114 aa13.34□□□□□ -0.27
SYF2-201ENST00000236273 LINC00308Q8TCZ7 52 aa13.34□□□□□ -0.27
SYF2-201ENST00000236273 HMCN2Q8NDA2 5059 aa13.33□□□□□ -0.28
SYF2-201ENST00000236273 SPRR1AP35321 89 aa13.33□□□□□ -0.28
SYF2-201ENST00000236273 PRLHP81277 87 aa13.33□□□□□ -0.28
SYF2-201ENST00000236273 FAM19A1Q7Z5A9 133 aa13.33□□□□□ -0.28
SYF2-201ENST00000236273 PRR26Q8N8Z3 221 aa13.33□□□□□ -0.28
SYF2-201ENST00000236273 MIEN1Q9BRT3 115 aa13.33□□□□□ -0.28
SYF2-201ENST00000236273 UBE2AP49459 152 aa13.32□□□□□ -0.28
SYF2-201ENST00000236273 KRTAP4-16G5E9R7 235 aaPredicted RBP13.31□□□□□ -0.28
SYF2-201ENST00000236273 SPANXB1Q9NS25 103 aaPredicted RBP13.31□□□□□ -0.28
SYF2-201ENST00000236273 PRYO14603 147 aa13.3□□□□□ -0.28
SYF2-201ENST00000236273 IGLV6-57P01721 117 aa13.28□□□□□ -0.28
SYF2-201ENST00000236273 DDTP30046 118 aa13.28□□□□□ -0.28
SYF2-201ENST00000236273 SPANXDQ9BXN6 97 aa13.27□□□□□ -0.29
SYF2-201ENST00000236273 SPANXCQ9NY87 97 aa13.27□□□□□ -0.29
SYF2-201ENST00000236273 SCGB1D4Q6XE38 83 aa13.26□□□□□ -0.29
SYF2-201ENST00000236273 LINC00337Q8N6G1 96 aa13.26□□□□□ -0.29
SYF2-201ENST00000236273 SCGB1D1O95968 90 aa13.25□□□□□ -0.29
SYF2-201ENST00000236273 ANAPC11Q9NYG5 84 aa13.23□□□□□ -0.29
SYF2-201ENST00000236273 A0A087X002 238 aa13.22□□□□□ -0.29
SYF2-201ENST00000236273 HSBP1L1C9JCN9 74 aa13.21□□□□□ -0.29
SYF2-201ENST00000236273 S100A7L2Q5SY68 101 aa13.2□□□□□ -0.3
SYF2-201ENST00000236273 B5MCH6 92 aa13.19□□□□□ -0.3
SYF2-201ENST00000236273 HIGD2AQ9BW72 106 aa13.19□□□□□ -0.3
SYF2-201ENST00000236273 PPDPFQ9H3Y8 114 aa13.19□□□□□ -0.3
SYF2-201ENST00000236273 IFITM1P13164 125 aa13.18□□□□□ -0.3
SYF2-201ENST00000236273 Q6ZVH6 145 aa13.18□□□□□ -0.3
SYF2-201ENST00000236273 MUSTN1Q8IVN3 82 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms