RNA–Protein interactions for RNA: ENST00000225603.8

CBX1-201, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-201ENST00000225603 SIGMAR1Q99720 223 aa11.94□□□□□ -0.5
CBX1-201ENST00000225603 NTN5Q8WTR8 489 aaPredicted RBP11.94□□□□□ -0.5
CBX1-201ENST00000225603 H3BT86 120 aa11.93□□□□□ -0.5
CBX1-201ENST00000225603 LY6G6CO95867 125 aa11.93□□□□□ -0.5
CBX1-201ENST00000225603 C2orf82Q6UX34 121 aa11.93□□□□□ -0.5
CBX1-201ENST00000225603 IGKV2-28A0A075B6P5 120 aa11.92□□□□□ -0.5
CBX1-201ENST00000225603 IGKV2D-28P01615 120 aa11.92□□□□□ -0.5
CBX1-201ENST00000225603 C15orf56Q8N910 161 aa11.92□□□□□ -0.5
CBX1-201ENST00000225603 C6orf223Q8N319 242 aa11.92□□□□□ -0.5
CBX1-201ENST00000225603 LINC00476Q8WZB0 136 aa11.92□□□□□ -0.5
CBX1-201ENST00000225603 RMI2Q96E14 147 aa11.92□□□□□ -0.5
CBX1-201ENST00000225603 TTC32Q5I0X7 151 aa11.91□□□□□ -0.5
CBX1-201ENST00000225603 LINC00337Q8N6G1 96 aa11.91□□□□□ -0.5
CBX1-201ENST00000225603 CDIP1Q9H305 208 aa11.91□□□□□ -0.5
CBX1-201ENST00000225603 DNAH10Q8IVF4 4471 aa11.91□□□□□ -0.5
CBX1-201ENST00000225603 KMT2AQ03164 3969 aa11.91□□□□□ -0.5
CBX1-201ENST00000225603 SPAG11BQ08648 103 aa11.91□□□□□ -0.5
CBX1-201ENST00000225603 HIGD2BQ4VC39 106 aa11.91□□□□□ -0.5
CBX1-201ENST00000225603 CKS1BP61024 79 aa11.88□□□□□ -0.51
CBX1-201ENST00000225603 TEX49A0A1B0GTD5 131 aa11.88□□□□□ -0.51
CBX1-201ENST00000225603 RPL28P46779 137 aaKnown RBP11.88□□□□□ -0.51
CBX1-201ENST00000225603 CFAP161Q6P656 301 aa11.88□□□□□ -0.51
CBX1-201ENST00000225603 Q6ZR54 194 aa11.88□□□□□ -0.51
CBX1-201ENST00000225603 LECT2O14960 151 aa11.87□□□□□ -0.51
CBX1-201ENST00000225603 CXCL5P42830 114 aa11.87□□□□□ -0.51
CBX1-201ENST00000225603 C10orf25Q5T742 122 aa11.87□□□□□ -0.51
CBX1-201ENST00000225603 USP17L23D6RBM5 183 aa11.86□□□□□ -0.51
CBX1-201ENST00000225603 ALMS1Q8TCU4 4167 aa11.86□□□□□ -0.51
CBX1-201ENST00000225603 UNQ6190/PRO20217Q6UXQ8 127 aa11.86□□□□□ -0.51
CBX1-201ENST00000225603 Q6ZRN7 208 aaPredicted RBP11.85□□□□□ -0.51
CBX1-201ENST00000225603 GVQW2A0A096LPI5 108 aaPredicted RBP11.84□□□□□ -0.51
CBX1-201ENST00000225603 ZNF561-AS1K7EIQ3 104 aa11.84□□□□□ -0.51
CBX1-201ENST00000225603 TRACP01848 142 aa11.84□□□□□ -0.51
CBX1-201ENST00000225603 FAM218AQ96MZ4 157 aa11.84□□□□□ -0.51
CBX1-201ENST00000225603 PSCAO43653 123 aa11.83□□□□□ -0.52
CBX1-201ENST00000225603 SMIM11BQ8TCY0 68 aa11.83□□□□□ -0.52
CBX1-201ENST00000225603 SCGB1A1P11684 91 aa11.83□□□□□ -0.52
CBX1-201ENST00000225603 C9orf116Q5BN46 136 aaPredicted RBP11.83□□□□□ -0.52
CBX1-201ENST00000225603 COX17Q14061 63 aa11.82□□□□□ -0.52
CBX1-201ENST00000225603 SLPIP03973 132 aa11.8□□□□□ -0.52
CBX1-201ENST00000225603 XGP55808 180 aa11.8□□□□□ -0.52
CBX1-201ENST00000225603 CAMK2N2Q96S95 79 aa11.8□□□□□ -0.52
CBX1-201ENST00000225603 Q6ZRU5 148 aa11.79□□□□□ -0.52
CBX1-201ENST00000225603 OR13C6PQ8NH95 151 aa11.79□□□□□ -0.52
CBX1-201ENST00000225603 C6orf48Q9UBA6 75 aa11.79□□□□□ -0.52
CBX1-201ENST00000225603 DNAH2Q9P225 4427 aa11.79□□□□□ -0.52
CBX1-201ENST00000225603 MT-ATP8P03928 68 aa11.79□□□□□ -0.52
CBX1-201ENST00000225603 C2orf48Q96LS8 159 aa11.79□□□□□ -0.52
CBX1-201ENST00000225603 DNAH6Q9C0G6 4158 aa11.78□□□□□ -0.52
CBX1-201ENST00000225603 LRCOL1A6NCL2 159 aa11.78□□□□□ -0.52
CBX1-201ENST00000225603 H0YGX0 51 aa11.76□□□□□ -0.53
CBX1-201ENST00000225603 NDUFC2O95298 119 aa11.76□□□□□ -0.53
CBX1-201ENST00000225603 BAALC-AS2P0C853 105 aa11.76□□□□□ -0.53
CBX1-201ENST00000225603 SYCNQ0VAF6 134 aa11.75□□□□□ -0.53
CBX1-201ENST00000225603 A0A087WYN8 130 aa11.75□□□□□ -0.53
CBX1-201ENST00000225603 C1orf134Q5TEV5 83 aa11.74□□□□□ -0.53
CBX1-201ENST00000225603 HYDINQ4G0P3 5121 aa11.74□□□□□ -0.53
CBX1-201ENST00000225603 PRR3P79522 188 aaKnown RBP11.74□□□□□ -0.53
CBX1-201ENST00000225603 C22orf24Q9Y442 160 aa11.73□□□□□ -0.53
CBX1-201ENST00000225603 F8WDY8 70 aa11.72□□□□□ -0.53
CBX1-201ENST00000225603 SACSQ9NZJ4 4579 aa11.71□□□□□ -0.54
CBX1-201ENST00000225603 FAM240AA0A1B0GVK7 77 aa11.71□□□□□ -0.54
CBX1-201ENST00000225603 DNAL4O96015 105 aa11.71□□□□□ -0.54
CBX1-201ENST00000225603 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.7□□□□□ -0.54
CBX1-201ENST00000225603 Q8NDZ9 215 aa11.7□□□□□ -0.54
CBX1-201ENST00000225603 A0A087WTM6 91 aa11.68□□□□□ -0.54
CBX1-201ENST00000225603 LCE6AA0A183 80 aa11.68□□□□□ -0.54
CBX1-201ENST00000225603 TMEM126AQ9H061 195 aa11.68□□□□□ -0.54
CBX1-201ENST00000225603 NCR3O14931 201 aa11.67□□□□□ -0.54
CBX1-201ENST00000225603 C14orf177Q52M58 125 aa11.67□□□□□ -0.54
CBX1-201ENST00000225603 RTL8CO15255 209 aa11.66□□□□□ -0.54
CBX1-201ENST00000225603 Q8N814 137 aa11.66□□□□□ -0.54
CBX1-201ENST00000225603 DNAH17Q9UFH2 4485 aa11.66□□□□□ -0.54
CBX1-201ENST00000225603 CNBPP62633 177 aaKnown RBP11.66□□□□□ -0.54
CBX1-201ENST00000225603 Q6ZRP5 223 aa11.66□□□□□ -0.54
CBX1-201ENST00000225603 NDUFC2-KCTD14E9PQ53 114 aa11.65□□□□□ -0.54
CBX1-201ENST00000225603 XAGE1AQ9HD64 81 aa11.65□□□□□ -0.54
CBX1-201ENST00000225603 SNCGO76070 127 aa11.64□□□□□ -0.55
CBX1-201ENST00000225603 FUSP35637 526 aaKnown RBP eCLIP11.64□□□□□ -0.55
CBX1-201ENST00000225603 TNP2Q05952 138 aa11.64□□□□□ -0.55
CBX1-201ENST00000225603 GAGE2EQ4V326 116 aa11.64□□□□□ -0.55
CBX1-201ENST00000225603 GAGE2DQ9UEU5 116 aa11.64□□□□□ -0.55
CBX1-201ENST00000225603 INAFM2P0DMQ5 153 aa11.63□□□□□ -0.55
CBX1-201ENST00000225603 ACYP1P07311 99 aa11.62□□□□□ -0.55
CBX1-201ENST00000225603 S100A7L2Q5SY68 101 aa11.62□□□□□ -0.55
CBX1-201ENST00000225603 FRAS1Q86XX4 4008 aa11.61□□□□□ -0.55
CBX1-201ENST00000225603 A0A1B0GX51 115 aa11.61□□□□□ -0.55
CBX1-201ENST00000225603 TLX1NBP0CAT3 122 aa11.61□□□□□ -0.55
CBX1-201ENST00000225603 RPL18AQ02543 176 aaKnown RBP11.61□□□□□ -0.55
CBX1-201ENST00000225603 LINC00167Q96N53 147 aa11.61□□□□□ -0.55
CBX1-201ENST00000225603 C6orf99Q4VX62 202 aa11.59□□□□□ -0.55
CBX1-201ENST00000225603 C9orf129Q5T035 196 aaKnown RBP11.59□□□□□ -0.55
CBX1-201ENST00000225603 ORMDL1Q9P0S3 153 aa11.59□□□□□ -0.55
CBX1-201ENST00000225603 IGLV6-57P01721 117 aa11.58□□□□□ -0.56
CBX1-201ENST00000225603 GAGE2BQ13066 116 aa11.58□□□□□ -0.56
CBX1-201ENST00000225603 OBSCN-AS1Q96MR7 158 aa11.58□□□□□ -0.56
CBX1-201ENST00000225603 LOC107984640A0A0U1RRK4 108 aa11.57□□□□□ -0.56
CBX1-201ENST00000225603 C9orf163Q8N9P6 203 aa11.57□□□□□ -0.56
CBX1-201ENST00000225603 KMT2CQ8NEZ4 4911 aaKnown RBP11.56□□□□□ -0.56
CBX1-201ENST00000225603 Q6Q795 121 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 150.2 ms