RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 HERVK_113P61574 105 aa8.92□□□□□ -0.98
SUPT4H1-201ENST00000225504 SFTA2Q6UW10 78 aa8.92□□□□□ -0.98
SUPT4H1-201ENST00000225504 C22orf24Q9Y442 160 aa8.92□□□□□ -0.98
SUPT4H1-201ENST00000225504 LINC00158P58513 81 aa8.91□□□□□ -0.98
SUPT4H1-201ENST00000225504 PRR3P79522 188 aaKnown RBP8.91□□□□□ -0.98
SUPT4H1-201ENST00000225504 COX17Q14061 63 aa8.91□□□□□ -0.98
SUPT4H1-201ENST00000225504 MYMXA0A1B0GTQ4 84 aa8.9□□□□□ -0.98
SUPT4H1-201ENST00000225504 E9PLD3 99 aa8.9□□□□□ -0.98
SUPT4H1-201ENST00000225504 S100A2P29034 98 aa8.9□□□□□ -0.98
SUPT4H1-201ENST00000225504 ATOH7Q8N100 152 aa8.9□□□□□ -0.98
SUPT4H1-201ENST00000225504 PSORS1C2Q9UIG4 136 aa8.9□□□□□ -0.98
SUPT4H1-201ENST00000225504 IGKV2D-26A0A0A0MRZ7 120 aa8.89□□□□□ -0.99
SUPT4H1-201ENST00000225504 C5orf52A6NGY3 159 aa8.89□□□□□ -0.99
SUPT4H1-201ENST00000225504 HERV-K104P63124 156 aa8.89□□□□□ -0.99
SUPT4H1-201ENST00000225504 Q8NDZ9 215 aa8.89□□□□□ -0.99
SUPT4H1-201ENST00000225504 LGALS3P17931 250 aaKnown RBP8.89□□□□□ -0.99
SUPT4H1-201ENST00000225504 MEIG1Q5JSS6 88 aa8.89□□□□□ -0.99
SUPT4H1-201ENST00000225504 PLA2G2DQ9UNK4 145 aa8.89□□□□□ -0.99
SUPT4H1-201ENST00000225504 TTTY13Q9BZ97 58 aa8.87□□□□□ -0.99
SUPT4H1-201ENST00000225504 C20orf202A1L168 122 aa8.86□□□□□ -0.99
SUPT4H1-201ENST00000225504 MIR7-3HGQ8N6C7 128 aa8.86□□□□□ -0.99
SUPT4H1-201ENST00000225504 LINC00167Q96N53 147 aa8.86□□□□□ -0.99
SUPT4H1-201ENST00000225504 IGLV5-37A0A075B6J1 123 aa8.85□□□□□ -0.99
SUPT4H1-201ENST00000225504 GAGE10A6NGK3 116 aa8.85□□□□□ -0.99
SUPT4H1-201ENST00000225504 VPREB1P12018 145 aa8.85□□□□□ -0.99
SUPT4H1-201ENST00000225504 PCP4P48539 62 aa8.85□□□□□ -0.99
SUPT4H1-201ENST00000225504 NMUP48645 174 aa8.85□□□□□ -0.99
SUPT4H1-201ENST00000225504 UBE2BP63146 152 aa8.85□□□□□ -0.99
SUPT4H1-201ENST00000225504 C1orf137Q5JT78 98 aa8.85□□□□□ -0.99
SUPT4H1-201ENST00000225504 MRPL55Q7Z7F7 128 aaKnown RBP8.85□□□□□ -0.99
SUPT4H1-201ENST00000225504 DAND5Q8N907 189 aa8.85□□□□□ -0.99
SUPT4H1-201ENST00000225504 A0A0J9YXY3 114 aa8.84□□□□□ -0.99
SUPT4H1-201ENST00000225504 RPL37AP8A6NKH3 93 aa8.84□□□□□ -0.99
SUPT4H1-201ENST00000225504 HSBP1L1C9JCN9 74 aa8.84□□□□□ -0.99
SUPT4H1-201ENST00000225504 SRSF9Q13242 221 aaKnown RBP eCLIP8.84□□□□□ -0.99
SUPT4H1-201ENST00000225504 LBHQ53QV2 105 aaPredicted RBP8.84□□□□□ -0.99
SUPT4H1-201ENST00000225504 TP73-AS1Q9UF72 201 aa8.84□□□□□ -0.99
SUPT4H1-201ENST00000225504 PKHD1L1Q86WI1 4243 aa8.84□□□□□ -0.99
SUPT4H1-201ENST00000225504 ADAMTSL4-AS1Q5T5F5 129 aa8.83□□□□□ -1
SUPT4H1-201ENST00000225504 MYCBP2O75592 4640 aa8.83□□□□□ -1
SUPT4H1-201ENST00000225504 LINC00587B1AMM8 73 aa8.83□□□□□ -1
SUPT4H1-201ENST00000225504 NKAPP1Q8N9T2 125 aa8.83□□□□□ -1
SUPT4H1-201ENST00000225504 ZNF815PA8K554 130 aa8.81□□□□□ -1
SUPT4H1-201ENST00000225504 EIF4EBP3O60516 100 aaPredicted RBP8.81□□□□□ -1
SUPT4H1-201ENST00000225504 IGLV7-43P04211 117 aa8.81□□□□□ -1
SUPT4H1-201ENST00000225504 RPL24P83731 157 aaKnown RBP8.81□□□□□ -1
SUPT4H1-201ENST00000225504 C21orf62-AS1Q17RA5 79 aa8.81□□□□□ -1
SUPT4H1-201ENST00000225504 BOD1L2Q8IYS8 172 aa8.81□□□□□ -1
SUPT4H1-201ENST00000225504 LITAFQ99732 161 aa8.8□□□□□ -1
SUPT4H1-201ENST00000225504 SOSTDC1Q6X4U4 206 aa8.79□□□□□ -1
SUPT4H1-201ENST00000225504 PCP2Q8IVA1 136 aa8.79□□□□□ -1
SUPT4H1-201ENST00000225504 IGKV2-28A0A075B6P5 120 aa8.78□□□□□ -1
SUPT4H1-201ENST00000225504 LOC107984156A0A0G2JMH3 177 aa8.78□□□□□ -1
SUPT4H1-201ENST00000225504 SCGB1D1O95968 90 aa8.78□□□□□ -1
SUPT4H1-201ENST00000225504 IGKV2D-28P01615 120 aa8.78□□□□□ -1
SUPT4H1-201ENST00000225504 NPC2P61916 151 aa8.78□□□□□ -1
SUPT4H1-201ENST00000225504 SPINK6Q6UWN8 80 aa8.78□□□□□ -1
SUPT4H1-201ENST00000225504 ARL17AQ8IVW1 177 aa8.78□□□□□ -1
SUPT4H1-201ENST00000225504 LRP1Q07954 4544 aaKnown RBP8.78□□□□□ -1
SUPT4H1-201ENST00000225504 IGLV1-50A0A075B6I6 118 aa8.77□□□□□ -1
SUPT4H1-201ENST00000225504 AKR1D1P51857 326 aa8.77□□□□□ -1
SUPT4H1-201ENST00000225504 KRTAP29-1A8MX34 341 aaPredicted RBP8.77□□□□□ -1.01
SUPT4H1-201ENST00000225504 NCR3O14931 201 aa8.77□□□□□ -1.01
SUPT4H1-201ENST00000225504 M0R378 163 aa8.76□□□□□ -1.01
SUPT4H1-201ENST00000225504 TMEM238C9JI98 176 aa8.75□□□□□ -1.01
SUPT4H1-201ENST00000225504 BCE1O60756 84 aa8.74□□□□□ -1.01
SUPT4H1-201ENST00000225504 TIMM17BO60830 172 aa8.74□□□□□ -1.01
SUPT4H1-201ENST00000225504 OXTP01178 125 aa8.73□□□□□ -1.01
SUPT4H1-201ENST00000225504 LINC00518Q8N0U6 118 aa8.73□□□□□ -1.01
SUPT4H1-201ENST00000225504 FAT3Q8TDW7 4589 aa8.73□□□□□ -1.01
SUPT4H1-201ENST00000225504 LINC00308Q8TCZ7 52 aa8.72□□□□□ -1.01
SUPT4H1-201ENST00000225504 J3QL48 77 aa8.71□□□□□ -1.01
SUPT4H1-201ENST00000225504 ZNF861PO60384 105 aa8.71□□□□□ -1.01
SUPT4H1-201ENST00000225504 SCGB1D4Q6XE38 83 aa8.71□□□□□ -1.01
SUPT4H1-201ENST00000225504 MIEN1Q9BRT3 115 aa8.71□□□□□ -1.01
SUPT4H1-201ENST00000225504 TMEM126AQ9H061 195 aa8.71□□□□□ -1.01
SUPT4H1-201ENST00000225504 TRBV10-3A0A0K0K1G6 114 aa8.7□□□□□ -1.02
SUPT4H1-201ENST00000225504 H0Y9J4 135 aa8.7□□□□□ -1.02
SUPT4H1-201ENST00000225504 MT1HL1P0DM35 61 aa8.7□□□□□ -1.02
SUPT4H1-201ENST00000225504 REG3GQ6UW15 175 aa8.7□□□□□ -1.02
SUPT4H1-201ENST00000225504 DIRC1Q969H9 104 aa8.7□□□□□ -1.02
SUPT4H1-201ENST00000225504 KRTAP13-1Q8IUC0 172 aa8.7□□□□□ -1.02
SUPT4H1-201ENST00000225504 DMBT1Q9UGM3 2413 aaPredicted RBP8.69□□□□□ -1.02
SUPT4H1-201ENST00000225504 NDUFC2O95298 119 aa8.69□□□□□ -1.02
SUPT4H1-201ENST00000225504 JOSD1Q15040 202 aaPredicted RBP8.69□□□□□ -1.02
SUPT4H1-201ENST00000225504 LINC01600Q96MT4 127 aa8.69□□□□□ -1.02
SUPT4H1-201ENST00000225504 TRBV10-2A0A0K0K1G8 114 aa8.68□□□□□ -1.02
SUPT4H1-201ENST00000225504 SPANXDQ9BXN6 97 aa8.68□□□□□ -1.02
SUPT4H1-201ENST00000225504 KCNQ1DNQ9H478 68 aa8.68□□□□□ -1.02
SUPT4H1-201ENST00000225504 SPANXB1Q9NS25 103 aaPredicted RBP8.68□□□□□ -1.02
SUPT4H1-201ENST00000225504 SPANXCQ9NY87 97 aa8.68□□□□□ -1.02
SUPT4H1-201ENST00000225504 RPL28P46779 137 aaKnown RBP8.67□□□□□ -1.02
SUPT4H1-201ENST00000225504 PRLHP81277 87 aa8.67□□□□□ -1.02
SUPT4H1-201ENST00000225504 FAM19A1Q7Z5A9 133 aa8.67□□□□□ -1.02
SUPT4H1-201ENST00000225504 DDTP30046 118 aa8.66□□□□□ -1.02
SUPT4H1-201ENST00000225504 UBE2AP49459 152 aa8.66□□□□□ -1.02
SUPT4H1-201ENST00000225504 MUSTN1Q8IVN3 82 aa8.66□□□□□ -1.02
SUPT4H1-201ENST00000225504 KRTAP1-4P0C5Y4 121 aa8.65□□□□□ -1.02
SUPT4H1-201ENST00000225504 HERC1Q15751 4861 aa8.65□□□□□ -1.02
SUPT4H1-201ENST00000225504 PRYO14603 147 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms