RNA–Protein interactions for RNA: ENST00000175091.4

LAPTM4A-201, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4A, Length 1,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-201ENST00000175091 RPL28P46779 137 aaKnown RBP10.23□□□□□ -0.77
LAPTM4A-201ENST00000175091 TTC32Q5I0X7 151 aa10.23□□□□□ -0.77
LAPTM4A-201ENST00000175091 ATXN8Q156A1 80 aa10.22□□□□□ -0.77
LAPTM4A-201ENST00000175091 MTURNQ8N3F0 131 aa10.22□□□□□ -0.77
LAPTM4A-201ENST00000175091 CARD19Q96LW7 228 aa10.22□□□□□ -0.77
LAPTM4A-201ENST00000175091 NBDYA0A0U1RRE5 68 aa10.21□□□□□ -0.77
LAPTM4A-201ENST00000175091 SLPIP03973 132 aa10.21□□□□□ -0.77
LAPTM4A-201ENST00000175091 LST1O00453 97 aa10.21□□□□□ -0.78
LAPTM4A-201ENST00000175091 PRR3P79522 188 aaKnown RBP10.21□□□□□ -0.78
LAPTM4A-201ENST00000175091 SMIM11BQ8TCY0 68 aa10.21□□□□□ -0.78
LAPTM4A-201ENST00000175091 CLEC2BQ92478 149 aa10.21□□□□□ -0.78
LAPTM4A-201ENST00000175091 XAGE1AQ9HD64 81 aa10.21□□□□□ -0.78
LAPTM4A-201ENST00000175091 LECT2O14960 151 aa10.2□□□□□ -0.78
LAPTM4A-201ENST00000175091 RNF151Q2KHN1 245 aa10.2□□□□□ -0.78
LAPTM4A-201ENST00000175091 OR13C6PQ8NH95 151 aa10.2□□□□□ -0.78
LAPTM4A-201ENST00000175091 NCR3O14931 201 aa10.19□□□□□ -0.78
LAPTM4A-201ENST00000175091 Q6ZRP5 223 aa10.19□□□□□ -0.78
LAPTM4A-201ENST00000175091 TGP01266 2768 aa10.19□□□□□ -0.78
LAPTM4A-201ENST00000175091 TLX1NBP0CAT3 122 aa10.19□□□□□ -0.78
LAPTM4A-201ENST00000175091 SMCPP49901 116 aaPredicted RBP10.19□□□□□ -0.78
LAPTM4A-201ENST00000175091 WFDC2Q14508 124 aa10.19□□□□□ -0.78
LAPTM4A-201ENST00000175091 LINC01620Q4KN68 170 aa10.18□□□□□ -0.78
LAPTM4A-201ENST00000175091 TRBV10-2A0A0K0K1G8 114 aa10.17□□□□□ -0.78
LAPTM4A-201ENST00000175091 PSCAO43653 123 aa10.17□□□□□ -0.78
LAPTM4A-201ENST00000175091 TMEM126AQ9H061 195 aa10.17□□□□□ -0.78
LAPTM4A-201ENST00000175091 C9JAW5 83 aa10.16□□□□□ -0.78
LAPTM4A-201ENST00000175091 VPREB1P12018 145 aa10.15□□□□□ -0.78
LAPTM4A-201ENST00000175091 GAGE2EQ4V326 116 aa10.15□□□□□ -0.78
LAPTM4A-201ENST00000175091 GAGE2DQ9UEU5 116 aa10.15□□□□□ -0.78
LAPTM4A-201ENST00000175091 SLC25A20O43772 301 aa10.14□□□□□ -0.79
LAPTM4A-201ENST00000175091 RPL18AQ02543 176 aaKnown RBP10.14□□□□□ -0.79
LAPTM4A-201ENST00000175091 Q6ZRN7 208 aaPredicted RBP10.14□□□□□ -0.79
LAPTM4A-201ENST00000175091 IGLV6-57P01721 117 aa10.14□□□□□ -0.79
LAPTM4A-201ENST00000175091 C9orf129Q5T035 196 aaKnown RBP10.14□□□□□ -0.79
LAPTM4A-201ENST00000175091 FAM218AQ96MZ4 157 aa10.14□□□□□ -0.79
LAPTM4A-201ENST00000175091 KMT2AQ03164 3969 aa10.13□□□□□ -0.79
LAPTM4A-201ENST00000175091 M0QXV9 152 aa10.13□□□□□ -0.79
LAPTM4A-201ENST00000175091 ETDBQ3ZM63 59 aa10.13□□□□□ -0.79
LAPTM4A-201ENST00000175091 S100A7L2Q5SY68 101 aa10.13□□□□□ -0.79
LAPTM4A-201ENST00000175091 DNAH2Q9P225 4427 aa10.12□□□□□ -0.79
LAPTM4A-201ENST00000175091 TRACP01848 142 aa10.12□□□□□ -0.79
LAPTM4A-201ENST00000175091 CNBPP62633 177 aaKnown RBP10.12□□□□□ -0.79
LAPTM4A-201ENST00000175091 OCIAD2Q56VL3 154 aa10.12□□□□□ -0.79
LAPTM4A-201ENST00000175091 LINC01600Q96MT4 127 aa10.12□□□□□ -0.79
LAPTM4A-201ENST00000175091 H0YGX0 51 aa10.11□□□□□ -0.79
LAPTM4A-201ENST00000175091 WWC2-AS2Q96NR7 200 aa10.11□□□□□ -0.79
LAPTM4A-201ENST00000175091 C14orf177Q52M58 125 aa10.11□□□□□ -0.79
LAPTM4A-201ENST00000175091 DNAH6Q9C0G6 4158 aa10.1□□□□□ -0.79
LAPTM4A-201ENST00000175091 TRBV10-3A0A0K0K1G6 114 aa10.09□□□□□ -0.79
LAPTM4A-201ENST00000175091 LRCOL1A6NCL2 159 aa10.09□□□□□ -0.79
LAPTM4A-201ENST00000175091 H3BT86 120 aa10.09□□□□□ -0.79
LAPTM4A-201ENST00000175091 ANKRD29Q8N6D5 301 aa10.09□□□□□ -0.79
LAPTM4A-201ENST00000175091 LOC107984640A0A0U1RRK4 108 aa10.09□□□□□ -0.79
LAPTM4A-201ENST00000175091 A0A087WYN8 130 aa10.08□□□□□ -0.8
LAPTM4A-201ENST00000175091 M0R378 163 aa10.08□□□□□ -0.8
LAPTM4A-201ENST00000175091 Q6ZR54 194 aa10.08□□□□□ -0.8
LAPTM4A-201ENST00000175091 TEN1Q86WV5 123 aa10.08□□□□□ -0.8
LAPTM4A-201ENST00000175091 PLA2G2DQ9UNK4 145 aa10.08□□□□□ -0.8
LAPTM4A-201ENST00000175091 ALMS1Q8TCU4 4167 aa10.08□□□□□ -0.8
LAPTM4A-201ENST00000175091 M0R2N4 97 aa10.07□□□□□ -0.8
LAPTM4A-201ENST00000175091 C6orf99Q4VX62 202 aa10.07□□□□□ -0.8
LAPTM4A-201ENST00000175091 SERTAD4-AS1Q5TG53 156 aa10.07□□□□□ -0.8
LAPTM4A-201ENST00000175091 TRAV23DV6A0A075B6W5 121 aa10.06□□□□□ -0.8
LAPTM4A-201ENST00000175091 K7ERU9 68 aa10.06□□□□□ -0.8
LAPTM4A-201ENST00000175091 GAGE2BQ13066 116 aa10.05□□□□□ -0.8
LAPTM4A-201ENST00000175091 IGLV5-37A0A075B6J1 123 aa10.04□□□□□ -0.8
LAPTM4A-201ENST00000175091 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.04□□□□□ -0.8
LAPTM4A-201ENST00000175091 NKAPP1Q8N9T2 125 aa10.03□□□□□ -0.8
LAPTM4A-201ENST00000175091 A0A1B0GX51 115 aa10.03□□□□□ -0.8
LAPTM4A-201ENST00000175091 FAM168BA1KXE4 195 aa10.02□□□□□ -0.81
LAPTM4A-201ENST00000175091 DNAL4O96015 105 aa10.02□□□□□ -0.81
LAPTM4A-201ENST00000175091 KRTAP7-1Q8IUC3 87 aa10.02□□□□□ -0.81
LAPTM4A-201ENST00000175091 LINC00476Q8WZB0 136 aa10.02□□□□□ -0.81
LAPTM4A-201ENST00000175091 DIRC1Q969H9 104 aa10.02□□□□□ -0.81
LAPTM4A-201ENST00000175091 C16orf90A8MZG2 172 aa10.01□□□□□ -0.81
LAPTM4A-201ENST00000175091 ZNF73O43830 326 aaPredicted RBP10.01□□□□□ -0.81
LAPTM4A-201ENST00000175091 A0A096LNI7 61 aa10.01□□□□□ -0.81
LAPTM4A-201ENST00000175091 C7orf33Q8WU49 177 aa10.01□□□□□ -0.81
LAPTM4A-201ENST00000175091 PPDPFLQ8WWR9 84 aa10.01□□□□□ -0.81
LAPTM4A-201ENST00000175091 CBY1Q9Y3M2 126 aa10.01□□□□□ -0.81
LAPTM4A-201ENST00000175091 LY6G6CO95867 125 aa10□□□□□ -0.81
LAPTM4A-201ENST00000175091 Q8N814 137 aa10□□□□□ -0.81
LAPTM4A-201ENST00000175091 LINC00167Q96N53 147 aa10□□□□□ -0.81
LAPTM4A-201ENST00000175091 DNAH17Q9UFH2 4485 aa10□□□□□ -0.81
LAPTM4A-201ENST00000175091 C9orf163Q8N9P6 203 aa9.99□□□□□ -0.81
LAPTM4A-201ENST00000175091 A0A087WTM6 91 aa9.98□□□□□ -0.81
LAPTM4A-201ENST00000175091 TRBV7-6A0A0J9YX20 115 aa9.98□□□□□ -0.81
LAPTM4A-201ENST00000175091 LINC00575Q6W349 94 aa9.98□□□□□ -0.81
LAPTM4A-201ENST00000175091 C3orf84H3BNL1 204 aa9.98□□□□□ -0.81
LAPTM4A-201ENST00000175091 BAALC-AS2P0C853 105 aa9.98□□□□□ -0.81
LAPTM4A-201ENST00000175091 ELOF1P60002 83 aaKnown RBP9.98□□□□□ -0.81
LAPTM4A-201ENST00000175091 KCNQ1DNQ9H478 68 aa9.98□□□□□ -0.81
LAPTM4A-201ENST00000175091 C22orf24Q9Y442 160 aa9.98□□□□□ -0.81
LAPTM4A-201ENST00000175091 HECTD4Q9Y4D8 3996 aa9.97□□□□□ -0.81
LAPTM4A-201ENST00000175091 TEX49A0A1B0GTD5 131 aa9.97□□□□□ -0.81
LAPTM4A-201ENST00000175091 J3QR89 54 aa9.97□□□□□ -0.81
LAPTM4A-201ENST00000175091 FAM19A5Q7Z5A7 132 aaPredicted RBP9.97□□□□□ -0.81
LAPTM4A-201ENST00000175091 PKIGQ9Y2B9 76 aa9.96□□□□□ -0.81
LAPTM4A-201ENST00000175091 IGKV2-24A0A0C4DH68 120 aa9.96□□□□□ -0.82
LAPTM4A-201ENST00000175091 C1orf134Q5TEV5 83 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms