RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 I3L3M4 83 aa4.48□□□□□ -1.69
SCARB2-226ENST00000640916 ATP5LO75964 103 aa4.48□□□□□ -1.69
SCARB2-226ENST00000640916 FOXA3P55318 350 aaPredicted RBP4.48□□□□□ -1.69
SCARB2-226ENST00000640916 KIAA0087Q14695 138 aa4.48□□□□□ -1.69
SCARB2-226ENST00000640916 STOML3Q8TAV4 291 aa4.48□□□□□ -1.69
SCARB2-226ENST00000640916 ORAOV1Q8WV07 137 aa4.48□□□□□ -1.69
SCARB2-226ENST00000640916 V9GYY9 64 aa4.48□□□□□ -1.69
SCARB2-226ENST00000640916 IGHV3OR16-9A0A0B4J2B5 98 aa4.47□□□□□ -1.69
SCARB2-226ENST00000640916 F2Z2F3 143 aa4.47□□□□□ -1.69
SCARB2-226ENST00000640916 S100A12P80511 92 aa4.47□□□□□ -1.69
SCARB2-226ENST00000640916 TCTE3Q8IZS6 198 aa4.47□□□□□ -1.69
SCARB2-226ENST00000640916 C3orf22Q8N5N4 141 aa4.47□□□□□ -1.69
SCARB2-226ENST00000640916 FAM104AQ969W3 186 aa4.47□□□□□ -1.69
SCARB2-226ENST00000640916 MRAP2Q96G30 205 aa4.47□□□□□ -1.69
SCARB2-226ENST00000640916 CNFNQ9BYD5 112 aa4.47□□□□□ -1.69
SCARB2-226ENST00000640916 TMEM242Q9NWH2 141 aa4.47□□□□□ -1.69
SCARB2-226ENST00000640916 GNG13Q9P2W3 67 aa4.47□□□□□ -1.69
SCARB2-226ENST00000640916 IGKV2D-26A0A0A0MRZ7 120 aa4.46□□□□□ -1.7
SCARB2-226ENST00000640916 TRBV6-5A0A0K0K1A5 114 aa4.46□□□□□ -1.7
SCARB2-226ENST00000640916 UMAD1C9J7I0 102 aa4.46□□□□□ -1.7
SCARB2-226ENST00000640916 NDUFC2-KCTD14E9PQ53 114 aa4.46□□□□□ -1.7
SCARB2-226ENST00000640916 G0S2P27469 103 aa4.46□□□□□ -1.7
SCARB2-226ENST00000640916 COX19Q49B96 90 aa4.46□□□□□ -1.7
SCARB2-226ENST00000640916 ALKAL2Q6UX46 152 aa4.46□□□□□ -1.7
SCARB2-226ENST00000640916 LINC01561Q8N1V8 128 aa4.46□□□□□ -1.7
SCARB2-226ENST00000640916 C9orf62Q8N4C0 152 aa4.46□□□□□ -1.7
SCARB2-226ENST00000640916 PACRGQ96M98 296 aaPredicted RBP4.46□□□□□ -1.7
SCARB2-226ENST00000640916 UBE2D4Q9Y2X8 147 aa4.46□□□□□ -1.7
SCARB2-226ENST00000640916 PAM16Q9Y3D7 125 aa4.46□□□□□ -1.7
SCARB2-226ENST00000640916 POLR2KP53803 58 aaKnown RBP4.45□□□□□ -1.7
SCARB2-226ENST00000640916 RPS20P60866 119 aaKnown RBP4.45□□□□□ -1.7
SCARB2-226ENST00000640916 C2orf82Q6UX34 121 aa4.45□□□□□ -1.7
SCARB2-226ENST00000640916 MBD3L1Q8WWY6 194 aa4.45□□□□□ -1.7
SCARB2-226ENST00000640916 C7orf77A4D0Y5 90 aa4.44□□□□□ -1.7
SCARB2-226ENST00000640916 TMEM238C9JI98 176 aa4.44□□□□□ -1.7
SCARB2-226ENST00000640916 M0R2T5 61 aa4.44□□□□□ -1.7
SCARB2-226ENST00000640916 RIGQ13278 110 aa4.44□□□□□ -1.7
SCARB2-226ENST00000640916 TWIST1Q15672 202 aa4.44□□□□□ -1.7
SCARB2-226ENST00000640916 Q6ZUT4 128 aa4.44□□□□□ -1.7
SCARB2-226ENST00000640916 SLC51BQ86UW2 128 aa4.44□□□□□ -1.7
SCARB2-226ENST00000640916 TRBV30A0A0K0K1B3 111 aa4.43□□□□□ -1.7
SCARB2-226ENST00000640916 TRBV27A0A0K0K1C4 114 aa4.43□□□□□ -1.7
SCARB2-226ENST00000640916 GATCO43716 136 aaKnown RBP4.43□□□□□ -1.7
SCARB2-226ENST00000640916 RAB4AP20338 218 aa4.43□□□□□ -1.7
SCARB2-226ENST00000640916 RPL35P42766 123 aaKnown RBP4.43□□□□□ -1.7
SCARB2-226ENST00000640916 CENPWQ5EE01 88 aa4.43□□□□□ -1.7
SCARB2-226ENST00000640916 SPAG11AQ6PDA7 123 aa4.43□□□□□ -1.7
SCARB2-226ENST00000640916 MRPL55Q7Z7F7 128 aaKnown RBP4.43□□□□□ -1.7
SCARB2-226ENST00000640916 TP73-AS1Q9UF72 201 aa4.43□□□□□ -1.7
SCARB2-226ENST00000640916 RPL37AP8A6NKH3 93 aa4.42□□□□□ -1.7
SCARB2-226ENST00000640916 K7EN84 100 aa4.42□□□□□ -1.7
SCARB2-226ENST00000640916 PPP1R2P9O14990 202 aa4.42□□□□□ -1.7
SCARB2-226ENST00000640916 IFNA1P01562 189 aa4.42□□□□□ -1.7
SCARB2-226ENST00000640916 LINC00167Q96N53 147 aa4.42□□□□□ -1.7
SCARB2-226ENST00000640916 XAGE1AQ9HD64 81 aa4.42□□□□□ -1.7
SCARB2-226ENST00000640916 MANBALQ9NQG1 85 aa4.42□□□□□ -1.7
SCARB2-226ENST00000640916 MED9Q9NWA0 146 aa4.42□□□□□ -1.7
SCARB2-226ENST00000640916 ZNF727A8MUV8 499 aa4.41□□□□□ -1.7
SCARB2-226ENST00000640916 PCOTHQ58A44 107 aa4.41□□□□□ -1.7
SCARB2-226ENST00000640916 TEX261Q6UWH6 196 aa4.41□□□□□ -1.7
SCARB2-226ENST00000640916 ST20Q9HBF5 79 aa4.41□□□□□ -1.7
SCARB2-226ENST00000640916 TRBV20OR9-2A0A075B6H5 130 aa4.4□□□□□ -1.71
SCARB2-226ENST00000640916 IGLV8-61A0A075B6I0 122 aa4.4□□□□□ -1.71
SCARB2-226ENST00000640916 GNG4P50150 75 aa4.4□□□□□ -1.71
SCARB2-226ENST00000640916 C11orf52Q96A22 123 aa4.4□□□□□ -1.71
SCARB2-226ENST00000640916 TIMM21Q9BVV7 248 aa4.4□□□□□ -1.71
SCARB2-226ENST00000640916 Q6ZVQ6 151 aa4.39□□□□□ -1.71
SCARB2-226ENST00000640916 DAND5Q8N907 189 aa4.39□□□□□ -1.71
SCARB2-226ENST00000640916 PLEKHB2Q96CS7 222 aa4.39□□□□□ -1.71
SCARB2-226ENST00000640916 PDE6DO43924 150 aa4.38□□□□□ -1.71
SCARB2-226ENST00000640916 UBE2AP49459 152 aa4.38□□□□□ -1.71
SCARB2-226ENST00000640916 RPL39P62891 51 aaKnown RBP4.37□□□□□ -1.71
SCARB2-226ENST00000640916 PRLHP81277 87 aa4.37□□□□□ -1.71
SCARB2-226ENST00000640916 TAL2Q16559 108 aa4.37□□□□□ -1.71
SCARB2-226ENST00000640916 Q8N377 158 aa4.37□□□□□ -1.71
SCARB2-226ENST00000640916 EIF5A2Q9GZV4 153 aaKnown RBP4.37□□□□□ -1.71
SCARB2-226ENST00000640916 SNAPINO95295 136 aa4.36□□□□□ -1.71
SCARB2-226ENST00000640916 RPL32P62910 135 aaKnown RBP4.36□□□□□ -1.71
SCARB2-226ENST00000640916 Q8NBF4 154 aa4.36□□□□□ -1.71
SCARB2-226ENST00000640916 SMIM12Q96EX1 92 aa4.36□□□□□ -1.71
SCARB2-226ENST00000640916 SPINK1P00995 79 aa4.35□□□□□ -1.71
SCARB2-226ENST00000640916 FCER1GP30273 86 aa4.35□□□□□ -1.71
SCARB2-226ENST00000640916 NRACQ8N912 160 aa4.35□□□□□ -1.71
SCARB2-226ENST00000640916 KIR2DL4Q99706 377 aa4.35□□□□□ -1.71
SCARB2-226ENST00000640916 IGLV5-37A0A075B6J1 123 aa4.34□□□□□ -1.71
SCARB2-226ENST00000640916 C9JQL5 133 aa4.34□□□□□ -1.71
SCARB2-226ENST00000640916 SMKR1H3BMG3 65 aa4.34□□□□□ -1.71
SCARB2-226ENST00000640916 SCO1O75880 301 aa4.34□□□□□ -1.71
SCARB2-226ENST00000640916 SRP19P09132 144 aaKnown RBP4.34□□□□□ -1.71
SCARB2-226ENST00000640916 MRPS36P82909 103 aaKnown RBP4.34□□□□□ -1.71
SCARB2-226ENST00000640916 SMAGPQ0VAQ4 97 aa4.34□□□□□ -1.71
SCARB2-226ENST00000640916 KRTAP6-3Q3LI67 103 aa4.34□□□□□ -1.71
SCARB2-226ENST00000640916 SMIM15Q7Z3B0 74 aa4.34□□□□□ -1.71
SCARB2-226ENST00000640916 FAM19A1Q7Z5A9 133 aa4.34□□□□□ -1.71
SCARB2-226ENST00000640916 SMIM7Q9BQ49 75 aa4.34□□□□□ -1.71
SCARB2-226ENST00000640916 TGIF2-C20orf24A0A0A6YYL0 155 aa4.33□□□□□ -1.72
SCARB2-226ENST00000640916 IFITM10A6NMD0 228 aa4.33□□□□□ -1.72
SCARB2-226ENST00000640916 PDZD11Q5EBL8 140 aa4.33□□□□□ -1.72
SCARB2-226ENST00000640916 TMEM250H0YL14 139 aa4.32□□□□□ -1.72
SCARB2-226ENST00000640916 CFC1P0CG37 223 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms