RNA–Protein interactions for RNA: ENST00000639738.1

SCARB2-219, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 1,517 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-219ENST00000639738 NDUFA12Q9UI09 145 aa13.63□□□□□ -0.23
SCARB2-219ENST00000639738 FAT2Q9NYQ8 4349 aa13.62□□□□□ -0.23
SCARB2-219ENST00000639738 DLEU1O43261 78 aa13.62□□□□□ -0.23
SCARB2-219ENST00000639738 SLPIP03973 132 aa13.62□□□□□ -0.23
SCARB2-219ENST00000639738 C6orf226Q5I0X4 101 aa13.62□□□□□ -0.23
SCARB2-219ENST00000639738 C2orf82Q6UX34 121 aa13.62□□□□□ -0.23
SCARB2-219ENST00000639738 MYMXA0A1B0GTQ4 84 aa13.6□□□□□ -0.23
SCARB2-219ENST00000639738 C10orf25Q5T742 122 aa13.6□□□□□ -0.23
SCARB2-219ENST00000639738 C2orf48Q96LS8 159 aa13.6□□□□□ -0.23
SCARB2-219ENST00000639738 PRO1933Q9H354 126 aa13.6□□□□□ -0.23
SCARB2-219ENST00000639738 ZNF815PA8K554 130 aa13.59□□□□□ -0.23
SCARB2-219ENST00000639738 PRSS2P07478 247 aa13.59□□□□□ -0.23
SCARB2-219ENST00000639738 DNAH11Q96DT5 4516 aa13.59□□□□□ -0.23
SCARB2-219ENST00000639738 A0A087WTM6 91 aa13.59□□□□□ -0.23
SCARB2-219ENST00000639738 UNQ6190/PRO20217Q6UXQ8 127 aa13.59□□□□□ -0.23
SCARB2-219ENST00000639738 ZNF561-AS1K7EIQ3 104 aa13.58□□□□□ -0.24
SCARB2-219ENST00000639738 CXCL5P42830 114 aa13.57□□□□□ -0.24
SCARB2-219ENST00000639738 SLC25A34Q6PIV7 304 aa13.57□□□□□ -0.24
SCARB2-219ENST00000639738 A0A0J9YXY3 114 aa13.56□□□□□ -0.24
SCARB2-219ENST00000639738 F8WDY8 70 aa13.56□□□□□ -0.24
SCARB2-219ENST00000639738 CKS1BP61024 79 aa13.55□□□□□ -0.24
SCARB2-219ENST00000639738 TNP2Q05952 138 aa13.55□□□□□ -0.24
SCARB2-219ENST00000639738 HECTD4Q9Y4D8 3996 aa13.55□□□□□ -0.24
SCARB2-219ENST00000639738 SFTA2Q6UW10 78 aa13.54□□□□□ -0.24
SCARB2-219ENST00000639738 Q6ZRU5 148 aa13.54□□□□□ -0.24
SCARB2-219ENST00000639738 C2orf91Q6ZV80 131 aa13.54□□□□□ -0.24
SCARB2-219ENST00000639738 C6orf48Q9UBA6 75 aa13.54□□□□□ -0.24
SCARB2-219ENST00000639738 HERV-K104P63124 156 aa13.54□□□□□ -0.24
SCARB2-219ENST00000639738 Q8N814 137 aa13.54□□□□□ -0.24
SCARB2-219ENST00000639738 LITAFQ99732 161 aa13.54□□□□□ -0.24
SCARB2-219ENST00000639738 MIEN1Q9BRT3 115 aa13.54□□□□□ -0.24
SCARB2-219ENST00000639738 UQCR10Q9UDW1 63 aa13.54□□□□□ -0.24
SCARB2-219ENST00000639738 C14orf177Q52M58 125 aa13.53□□□□□ -0.24
SCARB2-219ENST00000639738 CAMK2N2Q96S95 79 aa13.53□□□□□ -0.24
SCARB2-219ENST00000639738 PKD1P98161 4303 aa13.52□□□□□ -0.24
SCARB2-219ENST00000639738 CNBPP62633 177 aaKnown RBP13.52□□□□□ -0.25
SCARB2-219ENST00000639738 SYCNQ0VAF6 134 aa13.52□□□□□ -0.25
SCARB2-219ENST00000639738 C9orf116Q5BN46 136 aaPredicted RBP13.51□□□□□ -0.25
SCARB2-219ENST00000639738 TRBV30A0A0K0K1B3 111 aa13.5□□□□□ -0.25
SCARB2-219ENST00000639738 RNF151Q2KHN1 245 aa13.49□□□□□ -0.25
SCARB2-219ENST00000639738 ADAMTSL4-AS1Q5T5F5 129 aa13.49□□□□□ -0.25
SCARB2-219ENST00000639738 HIGD1BQ9P298 99 aa13.49□□□□□ -0.25
SCARB2-219ENST00000639738 ERG28Q9UKR5 140 aa13.49□□□□□ -0.25
SCARB2-219ENST00000639738 TSTD3H0UI37 97 aa13.48□□□□□ -0.25
SCARB2-219ENST00000639738 TIMM17BO60830 172 aa13.48□□□□□ -0.25
SCARB2-219ENST00000639738 CARD19Q96LW7 228 aa13.48□□□□□ -0.25
SCARB2-219ENST00000639738 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.47□□□□□ -0.25
SCARB2-219ENST00000639738 SMIM13P0DJ93 91 aa13.47□□□□□ -0.25
SCARB2-219ENST00000639738 SCGB1D4Q6XE38 83 aa13.47□□□□□ -0.25
SCARB2-219ENST00000639738 COX17Q14061 63 aa13.44□□□□□ -0.26
SCARB2-219ENST00000639738 SPANXB1Q9NS25 103 aaPredicted RBP13.44□□□□□ -0.26
SCARB2-219ENST00000639738 DNAH5Q8TE73 4624 aa13.43□□□□□ -0.26
SCARB2-219ENST00000639738 A0A0U1RRA0 63 aa13.43□□□□□ -0.26
SCARB2-219ENST00000639738 TLX1NBP0CAT3 122 aa13.43□□□□□ -0.26
SCARB2-219ENST00000639738 PFN2P35080 140 aa13.43□□□□□ -0.26
SCARB2-219ENST00000639738 MEIG1Q5JSS6 88 aa13.43□□□□□ -0.26
SCARB2-219ENST00000639738 C9orf163Q8N9P6 203 aa13.43□□□□□ -0.26
SCARB2-219ENST00000639738 SPANXDQ9BXN6 97 aa13.42□□□□□ -0.26
SCARB2-219ENST00000639738 SPANXCQ9NY87 97 aa13.42□□□□□ -0.26
SCARB2-219ENST00000639738 LINC00587B1AMM8 73 aa13.41□□□□□ -0.26
SCARB2-219ENST00000639738 EIF4EBP3O60516 100 aaPredicted RBP13.41□□□□□ -0.26
SCARB2-219ENST00000639738 DAND5Q8N907 189 aa13.41□□□□□ -0.26
SCARB2-219ENST00000639738 DDTP30046 118 aa13.4□□□□□ -0.26
SCARB2-219ENST00000639738 FUSP35637 526 aaKnown RBP eCLIP13.4□□□□□ -0.26
SCARB2-219ENST00000639738 HNRNPA3P51991 378 aaKnown RBP13.4□□□□□ -0.26
SCARB2-219ENST00000639738 LINC00158P58513 81 aa13.4□□□□□ -0.26
SCARB2-219ENST00000639738 CIRBPQ14011 172 aaKnown RBP13.4□□□□□ -0.26
SCARB2-219ENST00000639738 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.39□□□□□ -0.27
SCARB2-219ENST00000639738 TMEM238C9JI98 176 aa13.39□□□□□ -0.27
SCARB2-219ENST00000639738 KRTAP10-2P60368 255 aa13.39□□□□□ -0.27
SCARB2-219ENST00000639738 LINC00336Q6ZUF6 198 aa13.39□□□□□ -0.27
SCARB2-219ENST00000639738 MIR7-3HGQ8N6C7 128 aa13.39□□□□□ -0.27
SCARB2-219ENST00000639738 NDUFC2-KCTD14E9PQ53 114 aa13.39□□□□□ -0.27
SCARB2-219ENST00000639738 PTTG1IPP53801 180 aa13.39□□□□□ -0.27
SCARB2-219ENST00000639738 SOSTDC1Q6X4U4 206 aa13.39□□□□□ -0.27
SCARB2-219ENST00000639738 Q6ZRP5 223 aa13.39□□□□□ -0.27
SCARB2-219ENST00000639738 LOC107984156A0A0G2JMH3 177 aa13.37□□□□□ -0.27
SCARB2-219ENST00000639738 EREGO14944 169 aa13.37□□□□□ -0.27
SCARB2-219ENST00000639738 Q6ZVH6 145 aa13.37□□□□□ -0.27
SCARB2-219ENST00000639738 ARL17AQ8IVW1 177 aa13.37□□□□□ -0.27
SCARB2-219ENST00000639738 CTAG1AP78358 180 aa13.36□□□□□ -0.27
SCARB2-219ENST00000639738 TAL2Q16559 108 aa13.36□□□□□ -0.27
SCARB2-219ENST00000639738 LINC01620Q4KN68 170 aa13.36□□□□□ -0.27
SCARB2-219ENST00000639738 SDIM1Q6ZPB5 146 aa13.36□□□□□ -0.27
SCARB2-219ENST00000639738 SND1-IT1Q9HBX3 110 aa13.36□□□□□ -0.27
SCARB2-219ENST00000639738 A0A1B0GVY2 172 aa13.35□□□□□ -0.27
SCARB2-219ENST00000639738 LINC00308Q8TCZ7 52 aa13.35□□□□□ -0.27
SCARB2-219ENST00000639738 LOC107984640A0A0U1RRK4 108 aa13.34□□□□□ -0.27
SCARB2-219ENST00000639738 MUSTN1Q8IVN3 82 aa13.34□□□□□ -0.27
SCARB2-219ENST00000639738 SRSF9Q13242 221 aaKnown RBP eCLIP13.34□□□□□ -0.27
SCARB2-219ENST00000639738 HIST1H4GQ99525 98 aa13.34□□□□□ -0.27
SCARB2-219ENST00000639738 PPDPFQ9H3Y8 114 aa13.34□□□□□ -0.27
SCARB2-219ENST00000639738 HSD52Q0P140 79 aa13.33□□□□□ -0.28
SCARB2-219ENST00000639738 IFITM1P13164 125 aa13.32□□□□□ -0.28
SCARB2-219ENST00000639738 C9orf129Q5T035 196 aaKnown RBP13.32□□□□□ -0.28
SCARB2-219ENST00000639738 DNAH8Q96JB1 4490 aa13.31□□□□□ -0.28
SCARB2-219ENST00000639738 IGLV5-52A0A0A0MRZ9 124 aa13.31□□□□□ -0.28
SCARB2-219ENST00000639738 NPC2P61916 151 aa13.31□□□□□ -0.28
SCARB2-219ENST00000639738 CEND1Q8N111 149 aa13.31□□□□□ -0.28
SCARB2-219ENST00000639738 Q8NDZ9 215 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms