RNA–Protein interactions for RNA: ENST00000639054.1

PAX6-250, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-250ENST00000639054 DNAH2Q9P225 4427 aa7.85□□□□□ -1.15
PAX6-250ENST00000639054 IGLV5-39A0A0G2JS06 123 aa7.85□□□□□ -1.15
PAX6-250ENST00000639054 NBDYA0A0U1RRE5 68 aa7.85□□□□□ -1.15
PAX6-250ENST00000639054 J3QQQ9 107 aa7.85□□□□□ -1.15
PAX6-250ENST00000639054 TOMM7Q9P0U1 55 aa7.85□□□□□ -1.15
PAX6-250ENST00000639054 LINC00526Q96FQ7 95 aa7.84□□□□□ -1.15
PAX6-250ENST00000639054 MALP21145 153 aa7.83□□□□□ -1.16
PAX6-250ENST00000639054 FABP2P12104 132 aa7.83□□□□□ -1.16
PAX6-250ENST00000639054 FXYD2P54710 66 aa7.83□□□□□ -1.16
PAX6-250ENST00000639054 LINC00476Q8WZB0 136 aa7.83□□□□□ -1.16
PAX6-250ENST00000639054 SMIM13P0DJ93 91 aa7.82□□□□□ -1.16
PAX6-250ENST00000639054 ZNF815PA8K554 130 aa7.82□□□□□ -1.16
PAX6-250ENST00000639054 LGALS3P17931 250 aaKnown RBP7.82□□□□□ -1.16
PAX6-250ENST00000639054 PLEKHB2Q96CS7 222 aa7.82□□□□□ -1.16
PAX6-250ENST00000639054 HIGD1BQ9P298 99 aa7.82□□□□□ -1.16
PAX6-250ENST00000639054 COX7B2Q8TF08 81 aa7.81□□□□□ -1.16
PAX6-250ENST00000639054 DNAH6Q9C0G6 4158 aa7.81□□□□□ -1.16
PAX6-250ENST00000639054 LECT2O14960 151 aa7.81□□□□□ -1.16
PAX6-250ENST00000639054 GCSHP23434 173 aa7.81□□□□□ -1.16
PAX6-250ENST00000639054 HIGD2BQ4VC39 106 aa7.81□□□□□ -1.16
PAX6-250ENST00000639054 C6orf223Q8N319 242 aa7.81□□□□□ -1.16
PAX6-250ENST00000639054 ZNF625Q96I27 306 aaPredicted RBP7.81□□□□□ -1.16
PAX6-250ENST00000639054 SACSQ9NZJ4 4579 aa7.8□□□□□ -1.16
PAX6-250ENST00000639054 MYMXA0A1B0GTQ4 84 aa7.8□□□□□ -1.16
PAX6-250ENST00000639054 K7ERJ3 54 aa7.8□□□□□ -1.16
PAX6-250ENST00000639054 C2orf82Q6UX34 121 aa7.8□□□□□ -1.16
PAX6-250ENST00000639054 NDUFA12Q9UI09 145 aa7.8□□□□□ -1.16
PAX6-250ENST00000639054 RPL24P83731 157 aaKnown RBP7.8□□□□□ -1.16
PAX6-250ENST00000639054 KIAA0087Q14695 138 aa7.8□□□□□ -1.16
PAX6-250ENST00000639054 C15orf56Q8N910 161 aa7.8□□□□□ -1.16
PAX6-250ENST00000639054 TTC32Q5I0X7 151 aa7.79□□□□□ -1.16
PAX6-250ENST00000639054 TM2D2Q9BX73 214 aa7.79□□□□□ -1.16
PAX6-250ENST00000639054 WFDC2Q14508 124 aa7.78□□□□□ -1.16
PAX6-250ENST00000639054 C6orf226Q5I0X4 101 aa7.78□□□□□ -1.16
PAX6-250ENST00000639054 LINC01561Q8N1V8 128 aa7.78□□□□□ -1.16
PAX6-250ENST00000639054 Q6ZR54 194 aa7.78□□□□□ -1.16
PAX6-250ENST00000639054 RMI2Q96E14 147 aa7.78□□□□□ -1.16
PAX6-250ENST00000639054 PRSS2P07478 247 aa7.77□□□□□ -1.17
PAX6-250ENST00000639054 SPAG11BQ08648 103 aa7.77□□□□□ -1.17
PAX6-250ENST00000639054 USP17L23D6RBM5 183 aa7.77□□□□□ -1.17
PAX6-250ENST00000639054 APOMO95445 188 aa7.77□□□□□ -1.17
PAX6-250ENST00000639054 SCGB1A1P11684 91 aa7.77□□□□□ -1.17
PAX6-250ENST00000639054 C10orf25Q5T742 122 aa7.77□□□□□ -1.17
PAX6-250ENST00000639054 Q8IZM0 81 aa7.77□□□□□ -1.17
PAX6-250ENST00000639054 CEND1Q8N111 149 aa7.77□□□□□ -1.17
PAX6-250ENST00000639054 SPANXB1Q9NS25 103 aaPredicted RBP7.77□□□□□ -1.17
PAX6-250ENST00000639054 A0A0J9YXY3 114 aa7.76□□□□□ -1.17
PAX6-250ENST00000639054 A0A0U1RRA0 63 aa7.76□□□□□ -1.17
PAX6-250ENST00000639054 NDUFA1O15239 70 aa7.76□□□□□ -1.17
PAX6-250ENST00000639054 PSCAO43653 123 aa7.76□□□□□ -1.17
PAX6-250ENST00000639054 SCGB1D4Q6XE38 83 aa7.76□□□□□ -1.17
PAX6-250ENST00000639054 Q6ZRN7 208 aaPredicted RBP7.76□□□□□ -1.17
PAX6-250ENST00000639054 SVIPQ8NHG7 77 aa7.76□□□□□ -1.17
PAX6-250ENST00000639054 SIGMAR1Q99720 223 aa7.76□□□□□ -1.17
PAX6-250ENST00000639054 NHP2Q9NX24 153 aaKnown RBP7.76□□□□□ -1.17
PAX6-250ENST00000639054 CFAP161Q6P656 301 aa7.76□□□□□ -1.17
PAX6-250ENST00000639054 FRAS1Q86XX4 4008 aa7.75□□□□□ -1.17
PAX6-250ENST00000639054 F8W1H4 67 aa7.75□□□□□ -1.17
PAX6-250ENST00000639054 UNQ6190/PRO20217Q6UXQ8 127 aa7.75□□□□□ -1.17
PAX6-250ENST00000639054 C9orf116Q5BN46 136 aaPredicted RBP7.75□□□□□ -1.17
PAX6-250ENST00000639054 ZNF561-AS1K7EIQ3 104 aa7.74□□□□□ -1.17
PAX6-250ENST00000639054 CKS1BP61024 79 aa7.74□□□□□ -1.17
PAX6-250ENST00000639054 DAND5Q8N907 189 aa7.74□□□□□ -1.17
PAX6-250ENST00000639054 NTN5Q8WTR8 489 aaPredicted RBP7.74□□□□□ -1.17
PAX6-250ENST00000639054 ADAMTSL4-AS1Q5T5F5 129 aa7.73□□□□□ -1.17
PAX6-250ENST00000639054 H3BMG7 143 aa7.73□□□□□ -1.17
PAX6-250ENST00000639054 SLPIP03973 132 aa7.73□□□□□ -1.17
PAX6-250ENST00000639054 DNAH17Q9UFH2 4485 aa7.73□□□□□ -1.17
PAX6-250ENST00000639054 KMT2CQ8NEZ4 4911 aaKnown RBP7.73□□□□□ -1.17
PAX6-250ENST00000639054 GVQW2A0A096LPI5 108 aaPredicted RBP7.72□□□□□ -1.17
PAX6-250ENST00000639054 TAL2Q16559 108 aa7.72□□□□□ -1.17
PAX6-250ENST00000639054 LITAFQ99732 161 aa7.72□□□□□ -1.17
PAX6-250ENST00000639054 PRO0461Q9UI25 63 aa7.72□□□□□ -1.17
PAX6-250ENST00000639054 PFN2P35080 140 aa7.72□□□□□ -1.17
PAX6-250ENST00000639054 ETDBQ3ZM63 59 aa7.72□□□□□ -1.17
PAX6-250ENST00000639054 MEIG1Q5JSS6 88 aa7.72□□□□□ -1.17
PAX6-250ENST00000639054 LRCOL1A6NCL2 159 aa7.71□□□□□ -1.17
PAX6-250ENST00000639054 NPC2P61916 151 aa7.71□□□□□ -1.17
PAX6-250ENST00000639054 Q6ZRU5 148 aa7.71□□□□□ -1.17
PAX6-250ENST00000639054 CAMK2N2Q96S95 79 aa7.71□□□□□ -1.17
PAX6-250ENST00000639054 C1orf134Q5TEV5 83 aa7.71□□□□□ -1.18
PAX6-250ENST00000639054 C6orf48Q9UBA6 75 aa7.71□□□□□ -1.18
PAX6-250ENST00000639054 J3QR89 54 aa7.7□□□□□ -1.18
PAX6-250ENST00000639054 EIF4EBP3O60516 100 aaPredicted RBP7.7□□□□□ -1.18
PAX6-250ENST00000639054 HERV-K104P63124 156 aa7.7□□□□□ -1.18
PAX6-250ENST00000639054 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.69□□□□□ -1.18
PAX6-250ENST00000639054 A0A1B0GWB2 263 aa7.69□□□□□ -1.18
PAX6-250ENST00000639054 HIST1H4GQ99525 98 aa7.69□□□□□ -1.18
PAX6-250ENST00000639054 HECTD4Q9Y4D8 3996 aa7.69□□□□□ -1.18
PAX6-250ENST00000639054 CXCL5P42830 114 aa7.69□□□□□ -1.18
PAX6-250ENST00000639054 LINC00158P58513 81 aa7.69□□□□□ -1.18
PAX6-250ENST00000639054 SRSF9Q13242 221 aaKnown RBP eCLIP7.69□□□□□ -1.18
PAX6-250ENST00000639054 MTURNQ8N3F0 131 aa7.69□□□□□ -1.18
PAX6-250ENST00000639054 ERG28Q9UKR5 140 aa7.69□□□□□ -1.18
PAX6-250ENST00000639054 LCE6AA0A183 80 aa7.68□□□□□ -1.18
PAX6-250ENST00000639054 FUSP35637 526 aaKnown RBP eCLIP7.68□□□□□ -1.18
PAX6-250ENST00000639054 C2orf48Q96LS8 159 aa7.68□□□□□ -1.18
PAX6-250ENST00000639054 A0A1B0GV72 72 aa7.68□□□□□ -1.18
PAX6-250ENST00000639054 SYCNQ0VAF6 134 aa7.68□□□□□ -1.18
PAX6-250ENST00000639054 RYR2Q92736 4967 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms