RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 FAM19A2Q8N3H0 131 aa13.7□□□□□ -0.22
SCN1B-206ENST00000638536 SMIM1B2RUZ4 78 aa13.69□□□□□ -0.22
SCN1B-206ENST00000638536 C9orf116Q5BN46 136 aaPredicted RBP13.69□□□□□ -0.22
SCN1B-206ENST00000638536 BAGE3Q86Y29 109 aa13.69□□□□□ -0.22
SCN1B-206ENST00000638536 LRP1Q07954 4544 aaKnown RBP13.69□□□□□ -0.22
SCN1B-206ENST00000638536 Q6ZRP5 223 aa13.68□□□□□ -0.22
SCN1B-206ENST00000638536 PACRGQ96M98 296 aaPredicted RBP13.68□□□□□ -0.22
SCN1B-206ENST00000638536 A0A1W2PNN7 141 aa13.68□□□□□ -0.22
SCN1B-206ENST00000638536 RPL37AP61513 92 aaKnown RBP13.68□□□□□ -0.22
SCN1B-206ENST00000638536 Q8IZM0 81 aa13.68□□□□□ -0.22
SCN1B-206ENST00000638536 LINC00474Q9P2X8 69 aa13.68□□□□□ -0.22
SCN1B-206ENST00000638536 NUPR1O60356 82 aa13.67□□□□□ -0.22
SCN1B-206ENST00000638536 SPINK8P0C7L1 97 aa13.67□□□□□ -0.22
SCN1B-206ENST00000638536 IGLC3P0DOY3 106 aa13.67□□□□□ -0.22
SCN1B-206ENST00000638536 C6orf226Q5I0X4 101 aa13.67□□□□□ -0.22
SCN1B-206ENST00000638536 PKIGQ9Y2B9 76 aa13.67□□□□□ -0.22
SCN1B-206ENST00000638536 ATP5LO75964 103 aa13.66□□□□□ -0.22
SCN1B-206ENST00000638536 PRSS2P07478 247 aa13.66□□□□□ -0.22
SCN1B-206ENST00000638536 SERF1AO75920 110 aa13.65□□□□□ -0.22
SCN1B-206ENST00000638536 HNRNPA3P51991 378 aaKnown RBP13.65□□□□□ -0.22
SCN1B-206ENST00000638536 HSBP1O75506 76 aa13.64□□□□□ -0.23
SCN1B-206ENST00000638536 TLX1NBP0CAT3 122 aa13.64□□□□□ -0.23
SCN1B-206ENST00000638536 TRBV30A0A0K0K1B3 111 aa13.64□□□□□ -0.23
SCN1B-206ENST00000638536 LOC105371267A0A1B0GV96 52 aa13.64□□□□□ -0.23
SCN1B-206ENST00000638536 ZNF22P17026 224 aaPredicted RBP13.64□□□□□ -0.23
SCN1B-206ENST00000638536 FAT3Q8TDW7 4589 aa13.63□□□□□ -0.23
SCN1B-206ENST00000638536 CKS1BP61024 79 aa13.63□□□□□ -0.23
SCN1B-206ENST00000638536 C11orf86A6NJI1 115 aa13.62□□□□□ -0.23
SCN1B-206ENST00000638536 GAGE2EQ4V326 116 aa13.62□□□□□ -0.23
SCN1B-206ENST00000638536 IFI27L1Q96BM0 104 aa13.62□□□□□ -0.23
SCN1B-206ENST00000638536 GAGE2DQ9UEU5 116 aa13.62□□□□□ -0.23
SCN1B-206ENST00000638536 FAM168BA1KXE4 195 aa13.61□□□□□ -0.23
SCN1B-206ENST00000638536 COX7B2Q8TF08 81 aa13.61□□□□□ -0.23
SCN1B-206ENST00000638536 DMBT1Q9UGM3 2413 aaPredicted RBP13.6□□□□□ -0.23
SCN1B-206ENST00000638536 CHTOPQ9Y3Y2 248 aaKnown RBP13.59□□□□□ -0.23
SCN1B-206ENST00000638536 HERC1Q15751 4861 aa13.59□□□□□ -0.23
SCN1B-206ENST00000638536 NDUFC2-KCTD14E9PQ53 114 aa13.58□□□□□ -0.24
SCN1B-206ENST00000638536 F8VRH5 84 aa13.58□□□□□ -0.24
SCN1B-206ENST00000638536 KRTAP7-1Q8IUC3 87 aa13.58□□□□□ -0.24
SCN1B-206ENST00000638536 IGLV5-39A0A0G2JS06 123 aa13.57□□□□□ -0.24
SCN1B-206ENST00000638536 H3BRM9 83 aa13.57□□□□□ -0.24
SCN1B-206ENST00000638536 C7orf33Q8WU49 177 aa13.57□□□□□ -0.24
SCN1B-206ENST00000638536 TRAV12-1A0A0B4J245 112 aa13.57□□□□□ -0.24
SCN1B-206ENST00000638536 C9orf129Q5T035 196 aaKnown RBP13.57□□□□□ -0.24
SCN1B-206ENST00000638536 HIST1H2BKO60814 126 aa13.56□□□□□ -0.24
SCN1B-206ENST00000638536 HIST1H2BJP06899 126 aa13.56□□□□□ -0.24
SCN1B-206ENST00000638536 HIST1H2BOP23527 126 aa13.56□□□□□ -0.24
SCN1B-206ENST00000638536 HIST1H2BBP33778 126 aa13.56□□□□□ -0.24
SCN1B-206ENST00000638536 HIST1H2BDP58876 126 aa13.56□□□□□ -0.24
SCN1B-206ENST00000638536 HIST1H2BCP62807 126 aa13.56□□□□□ -0.24
SCN1B-206ENST00000638536 HIST2H2BEQ16778 126 aa13.56□□□□□ -0.24
SCN1B-206ENST00000638536 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.56□□□□□ -0.24
SCN1B-206ENST00000638536 PHF5AQ7RTV0 110 aaKnown RBP13.56□□□□□ -0.24
SCN1B-206ENST00000638536 HIST1H2BHQ93079 126 aa13.56□□□□□ -0.24
SCN1B-206ENST00000638536 HIST1H2BNQ99877 126 aa13.56□□□□□ -0.24
SCN1B-206ENST00000638536 HIST1H2BMQ99879 126 aa13.56□□□□□ -0.24
SCN1B-206ENST00000638536 TMEM170BQ5T4T1 132 aa13.55□□□□□ -0.24
SCN1B-206ENST00000638536 LEPROTL1O95214 131 aa13.54□□□□□ -0.24
SCN1B-206ENST00000638536 H0Y8G0 127 aa13.53□□□□□ -0.24
SCN1B-206ENST00000638536 CXCL5P42830 114 aa13.53□□□□□ -0.24
SCN1B-206ENST00000638536 FABP4P15090 132 aa13.53□□□□□ -0.24
SCN1B-206ENST00000638536 PRR3P79522 188 aaKnown RBP13.53□□□□□ -0.24
SCN1B-206ENST00000638536 FAM19A5Q7Z5A7 132 aaPredicted RBP13.53□□□□□ -0.24
SCN1B-206ENST00000638536 XAGE1AQ9HD64 81 aa13.52□□□□□ -0.25
SCN1B-206ENST00000638536 KRTAP11-1Q8IUC1 163 aa13.51□□□□□ -0.25
SCN1B-206ENST00000638536 ODF1Q14990 250 aa13.5□□□□□ -0.25
SCN1B-206ENST00000638536 TMEM223A0PJW6 202 aa13.49□□□□□ -0.25
SCN1B-206ENST00000638536 SERTAD4-AS1Q5TG53 156 aa13.48□□□□□ -0.25
SCN1B-206ENST00000638536 PMCHL2Q9BQD1 86 aa13.46□□□□□ -0.26
SCN1B-206ENST00000638536 PSORS1C2Q9UIG4 136 aa13.46□□□□□ -0.26
SCN1B-206ENST00000638536 ZNF625Q96I27 306 aaPredicted RBP13.45□□□□□ -0.26
SCN1B-206ENST00000638536 HSPB8Q9UJY1 196 aa13.45□□□□□ -0.26
SCN1B-206ENST00000638536 M0QXV9 152 aa13.44□□□□□ -0.26
SCN1B-206ENST00000638536 KRTAP29-1A8MX34 341 aaPredicted RBP13.43□□□□□ -0.26
SCN1B-206ENST00000638536 PFN2P35080 140 aa13.42□□□□□ -0.26
SCN1B-206ENST00000638536 TNXBP22105 4242 aa13.4□□□□□ -0.26
SCN1B-206ENST00000638536 ERG28Q9UKR5 140 aa13.39□□□□□ -0.27
SCN1B-206ENST00000638536 C22orf24Q9Y442 160 aa13.39□□□□□ -0.27
SCN1B-206ENST00000638536 SRSF9Q13242 221 aaKnown RBP eCLIP13.39□□□□□ -0.27
SCN1B-206ENST00000638536 C1orf137Q5JT78 98 aa13.38□□□□□ -0.27
SCN1B-206ENST00000638536 J3QL48 77 aa13.37□□□□□ -0.27
SCN1B-206ENST00000638536 COA6Q5JTJ3 125 aaKnown RBP13.37□□□□□ -0.27
SCN1B-206ENST00000638536 MAP1LC3CQ9BXW4 147 aa13.37□□□□□ -0.27
SCN1B-206ENST00000638536 TSPEAR-AS2P59090 65 aa13.36□□□□□ -0.27
SCN1B-206ENST00000638536 DPM2O94777 84 aa13.35□□□□□ -0.27
SCN1B-206ENST00000638536 OXTP01178 125 aa13.35□□□□□ -0.27
SCN1B-206ENST00000638536 PLNP26678 52 aa13.35□□□□□ -0.27
SCN1B-206ENST00000638536 UBE2BP63146 152 aa13.35□□□□□ -0.27
SCN1B-206ENST00000638536 A0A0U1RRA0 63 aa13.34□□□□□ -0.27
SCN1B-206ENST00000638536 SYS1-DBNDD2H3BUS1 97 aa13.34□□□□□ -0.27
SCN1B-206ENST00000638536 IGKCP01834 107 aa13.34□□□□□ -0.27
SCN1B-206ENST00000638536 SND1-IT1Q9HBX3 110 aa13.34□□□□□ -0.27
SCN1B-206ENST00000638536 COX17Q14061 63 aa13.32□□□□□ -0.28
SCN1B-206ENST00000638536 Q8NDZ9 215 aa13.32□□□□□ -0.28
SCN1B-206ENST00000638536 PLA2G2DQ9UNK4 145 aa13.32□□□□□ -0.28
SCN1B-206ENST00000638536 SPINK6Q6UWN8 80 aa13.31□□□□□ -0.28
SCN1B-206ENST00000638536 SFTA2Q6UW10 78 aa13.31□□□□□ -0.28
SCN1B-206ENST00000638536 MRPL55Q7Z7F7 128 aaKnown RBP13.31□□□□□ -0.28
SCN1B-206ENST00000638536 LEPROTO15243 131 aa13.3□□□□□ -0.28
SCN1B-206ENST00000638536 IGLV7-43P04211 117 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms