RNA–Protein interactions for RNA: ENST00000637777.1

CACNA1A-249, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 728 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-249ENST00000637777 C9orf116Q5BN46 136 aaPredicted RBP9.06□□□□□ -0.96
CACNA1A-249ENST00000637777 BAGE3Q86Y29 109 aa9.06□□□□□ -0.96
CACNA1A-249ENST00000637777 Q8IZM0 81 aa9.06□□□□□ -0.96
CACNA1A-249ENST00000637777 H3BRM9 83 aa9.05□□□□□ -0.96
CACNA1A-249ENST00000637777 ATP5LO75964 103 aa9.05□□□□□ -0.96
CACNA1A-249ENST00000637777 SPINK8P0C7L1 97 aa9.05□□□□□ -0.96
CACNA1A-249ENST00000637777 URB1-AS1Q96HZ7 61 aa9.05□□□□□ -0.96
CACNA1A-249ENST00000637777 YPEL4Q96NS1 127 aa9.05□□□□□ -0.96
CACNA1A-249ENST00000637777 A0A1W2PNN7 141 aa9.04□□□□□ -0.96
CACNA1A-249ENST00000637777 Q6ZRP5 223 aa9.04□□□□□ -0.96
CACNA1A-249ENST00000637777 FAM19A5Q7Z5A7 132 aaPredicted RBP9.04□□□□□ -0.96
CACNA1A-249ENST00000637777 A0A096LNJ9 63 aa9.03□□□□□ -0.96
CACNA1A-249ENST00000637777 SMIM1B2RUZ4 78 aa9.03□□□□□ -0.96
CACNA1A-249ENST00000637777 NDUFC2-KCTD14E9PQ53 114 aa9.03□□□□□ -0.96
CACNA1A-249ENST00000637777 TLX1NBP0CAT3 122 aa9.03□□□□□ -0.96
CACNA1A-249ENST00000637777 CXCL5P42830 114 aa9.03□□□□□ -0.96
CACNA1A-249ENST00000637777 COX7B2Q8TF08 81 aa9.03□□□□□ -0.96
CACNA1A-249ENST00000637777 CHCHD1Q96BP2 118 aaKnown RBP9.03□□□□□ -0.96
CACNA1A-249ENST00000637777 F8VRH5 84 aa9.02□□□□□ -0.97
CACNA1A-249ENST00000637777 HSBP1O75506 76 aa9.02□□□□□ -0.97
CACNA1A-249ENST00000637777 TRGC2P03986 189 aa9.02□□□□□ -0.97
CACNA1A-249ENST00000637777 HNRNPA3P51991 378 aaKnown RBP9.02□□□□□ -0.97
CACNA1A-249ENST00000637777 PRR3P79522 188 aaKnown RBP9.02□□□□□ -0.97
CACNA1A-249ENST00000637777 PDZD11Q5EBL8 140 aa9.02□□□□□ -0.97
CACNA1A-249ENST00000637777 PHF5AQ7RTV0 110 aaKnown RBP9.01□□□□□ -0.97
CACNA1A-249ENST00000637777 IGLV5-45A0A087WSX0 123 aa9□□□□□ -0.97
CACNA1A-249ENST00000637777 FAM168BA1KXE4 195 aa9□□□□□ -0.97
CACNA1A-249ENST00000637777 IGLC3P0DOY3 106 aa9□□□□□ -0.97
CACNA1A-249ENST00000637777 KRTAP29-1A8MX34 341 aaPredicted RBP8.99□□□□□ -0.97
CACNA1A-249ENST00000637777 TMEM170BQ5T4T1 132 aa8.99□□□□□ -0.97
CACNA1A-249ENST00000637777 H0Y8G0 127 aa8.98□□□□□ -0.97
CACNA1A-249ENST00000637777 M0QXV9 152 aa8.98□□□□□ -0.97
CACNA1A-249ENST00000637777 OXTP01178 125 aa8.98□□□□□ -0.97
CACNA1A-249ENST00000637777 UBE2BP63146 152 aa8.98□□□□□ -0.97
CACNA1A-249ENST00000637777 FAM19A2Q8N3H0 131 aa8.98□□□□□ -0.97
CACNA1A-249ENST00000637777 IFI27L1Q96BM0 104 aa8.98□□□□□ -0.97
CACNA1A-249ENST00000637777 CHTOPQ9Y3Y2 248 aaKnown RBP8.98□□□□□ -0.97
CACNA1A-249ENST00000637777 ZNF22P17026 224 aaPredicted RBP8.97□□□□□ -0.97
CACNA1A-249ENST00000637777 XAGE1AQ9HD64 81 aa8.97□□□□□ -0.97
CACNA1A-249ENST00000637777 C1orf137Q5JT78 98 aa8.96□□□□□ -0.98
CACNA1A-249ENST00000637777 PKHD1L1Q86WI1 4243 aa8.96□□□□□ -0.98
CACNA1A-249ENST00000637777 C11orf86A6NJI1 115 aa8.95□□□□□ -0.98
CACNA1A-249ENST00000637777 C9orf129Q5T035 196 aaKnown RBP8.95□□□□□ -0.98
CACNA1A-249ENST00000637777 PSORS1C2Q9UIG4 136 aa8.95□□□□□ -0.98
CACNA1A-249ENST00000637777 SCO1O75880 301 aa8.94□□□□□ -0.98
CACNA1A-249ENST00000637777 SERF1AO75920 110 aa8.94□□□□□ -0.98
CACNA1A-249ENST00000637777 COLCA2A8K830 154 aa8.93□□□□□ -0.98
CACNA1A-249ENST00000637777 LEPROTL1O95214 131 aa8.93□□□□□ -0.98
CACNA1A-249ENST00000637777 TRAV12-1A0A0B4J245 112 aa8.92□□□□□ -0.98
CACNA1A-249ENST00000637777 PFN2P35080 140 aa8.92□□□□□ -0.98
CACNA1A-249ENST00000637777 LRP1Q07954 4544 aaKnown RBP8.92□□□□□ -0.98
CACNA1A-249ENST00000637777 IGLV5-39A0A0G2JS06 123 aa8.91□□□□□ -0.98
CACNA1A-249ENST00000637777 FABP4P15090 132 aa8.91□□□□□ -0.98
CACNA1A-249ENST00000637777 REG3GQ6UW15 175 aa8.91□□□□□ -0.98
CACNA1A-249ENST00000637777 SPINK6Q6UWN8 80 aa8.91□□□□□ -0.98
CACNA1A-249ENST00000637777 ZNF625Q96I27 306 aaPredicted RBP8.91□□□□□ -0.98
CACNA1A-249ENST00000637777 HERC1Q15751 4861 aa8.91□□□□□ -0.98
CACNA1A-249ENST00000637777 SERTAD4-AS1Q5TG53 156 aa8.9□□□□□ -0.98
CACNA1A-249ENST00000637777 HSPB8Q9UJY1 196 aa8.9□□□□□ -0.98
CACNA1A-249ENST00000637777 FAT3Q8TDW7 4589 aa8.89□□□□□ -0.99
CACNA1A-249ENST00000637777 LBHQ53QV2 105 aaPredicted RBP8.89□□□□□ -0.99
CACNA1A-249ENST00000637777 C22orf24Q9Y442 160 aa8.89□□□□□ -0.99
CACNA1A-249ENST00000637777 SFTA2Q6UW10 78 aa8.88□□□□□ -0.99
CACNA1A-249ENST00000637777 NKAPP1Q8N9T2 125 aa8.88□□□□□ -0.99
CACNA1A-249ENST00000637777 ERG28Q9UKR5 140 aa8.88□□□□□ -0.99
CACNA1A-249ENST00000637777 LINC00310P59036 64 aa8.87□□□□□ -0.99
CACNA1A-249ENST00000637777 KRTAP7-1Q8IUC3 87 aa8.87□□□□□ -0.99
CACNA1A-249ENST00000637777 TMEM223A0PJW6 202 aa8.86□□□□□ -0.99
CACNA1A-249ENST00000637777 IGLV7-43P04211 117 aa8.86□□□□□ -0.99
CACNA1A-249ENST00000637777 MRPL55Q7Z7F7 128 aaKnown RBP8.86□□□□□ -0.99
CACNA1A-249ENST00000637777 GAGE10A6NGK3 116 aa8.85□□□□□ -0.99
CACNA1A-249ENST00000637777 NUPR1O60356 82 aa8.85□□□□□ -0.99
CACNA1A-249ENST00000637777 ATP6V1G1O75348 118 aa8.85□□□□□ -0.99
CACNA1A-249ENST00000637777 LINC00158P58513 81 aa8.85□□□□□ -0.99
CACNA1A-249ENST00000637777 ODF1Q14990 250 aa8.85□□□□□ -0.99
CACNA1A-249ENST00000637777 KRTAP11-1Q8IUC1 163 aa8.85□□□□□ -0.99
CACNA1A-249ENST00000637777 A0A0U1RRA0 63 aa8.84□□□□□ -0.99
CACNA1A-249ENST00000637777 PLNP26678 52 aa8.84□□□□□ -0.99
CACNA1A-249ENST00000637777 MEIG1Q5JSS6 88 aa8.84□□□□□ -0.99
CACNA1A-249ENST00000637777 DIRC1Q969H9 104 aa8.84□□□□□ -0.99
CACNA1A-249ENST00000637777 MAP1LC3CQ9BXW4 147 aa8.84□□□□□ -0.99
CACNA1A-249ENST00000637777 RPL37AP8A6NKH3 93 aa8.83□□□□□ -1
CACNA1A-249ENST00000637777 HIST1H2BKO60814 126 aa8.83□□□□□ -1
CACNA1A-249ENST00000637777 HIST1H2BJP06899 126 aa8.83□□□□□ -1
CACNA1A-249ENST00000637777 HIST1H2BOP23527 126 aa8.83□□□□□ -1
CACNA1A-249ENST00000637777 HIST1H2BBP33778 126 aa8.83□□□□□ -1
CACNA1A-249ENST00000637777 HIST1H2BDP58876 126 aa8.83□□□□□ -1
CACNA1A-249ENST00000637777 HERVK_113P61574 105 aa8.83□□□□□ -1
CACNA1A-249ENST00000637777 HIST1H2BCP62807 126 aa8.83□□□□□ -1
CACNA1A-249ENST00000637777 SRSF9Q13242 221 aaKnown RBP eCLIP8.83□□□□□ -1
CACNA1A-249ENST00000637777 COX17Q14061 63 aa8.83□□□□□ -1
CACNA1A-249ENST00000637777 HIST2H2BEQ16778 126 aa8.83□□□□□ -1
CACNA1A-249ENST00000637777 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.83□□□□□ -1
CACNA1A-249ENST00000637777 HIST1H2BHQ93079 126 aa8.83□□□□□ -1
CACNA1A-249ENST00000637777 HIST1H2BNQ99877 126 aa8.83□□□□□ -1
CACNA1A-249ENST00000637777 HIST1H2BMQ99879 126 aa8.83□□□□□ -1
CACNA1A-249ENST00000637777 PMCHL2Q9BQD1 86 aa8.83□□□□□ -1
CACNA1A-249ENST00000637777 TP73-AS1Q9UF72 201 aa8.83□□□□□ -1
CACNA1A-249ENST00000637777 DPM2O94777 84 aa8.82□□□□□ -1
CACNA1A-249ENST00000637777 SND1-IT1Q9HBX3 110 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms