RNA–Protein interactions for RNA: ENST00000637485.1

CACNA1A-242, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 5,481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-242ENST00000637485 COX8CQ7Z4L0 72 aa6.96□□□□□ -1.3
CACNA1A-242ENST00000637485 CHCHD7Q9BUK0 85 aa6.96□□□□□ -1.3
CACNA1A-242ENST00000637485 FHL2Q14192 279 aa6.95□□□□□ -1.3
CACNA1A-242ENST00000637485 ERC2-IT1O76042 136 aa6.95□□□□□ -1.3
CACNA1A-242ENST00000637485 EDN2P20800 178 aa6.95□□□□□ -1.3
CACNA1A-242ENST00000637485 COX6A2Q02221 97 aa6.95□□□□□ -1.3
CACNA1A-242ENST00000637485 KPRPQ5T749 579 aaPredicted RBP6.95□□□□□ -1.3
CACNA1A-242ENST00000637485 LINC00474Q9P2X8 69 aa6.95□□□□□ -1.3
CACNA1A-242ENST00000637485 BBC3Q96PG8 261 aaPredicted RBP6.95□□□□□ -1.3
CACNA1A-242ENST00000637485 TTC28Q96AY4 2481 aa6.94□□□□□ -1.3
CACNA1A-242ENST00000637485 UNQ6190/PRO20217Q6UXQ8 127 aa6.94□□□□□ -1.3
CACNA1A-242ENST00000637485 REG3GQ6UW15 175 aa6.94□□□□□ -1.3
CACNA1A-242ENST00000637485 X6R8D5 127 aa6.94□□□□□ -1.3
CACNA1A-242ENST00000637485 KIAA1549Q9HCM3 1950 aa6.94□□□□□ -1.3
CACNA1A-242ENST00000637485 CPAMD8Q8IZJ3 1885 aa6.94□□□□□ -1.3
CACNA1A-242ENST00000637485 PRR3P79522 188 aaKnown RBP6.94□□□□□ -1.3
CACNA1A-242ENST00000637485 SPATA3Q8NHX4 192 aa6.93□□□□□ -1.3
CACNA1A-242ENST00000637485 DEFB131BA0A096LNP1 70 aa6.93□□□□□ -1.3
CACNA1A-242ENST00000637485 TNCP24821 2201 aa6.93□□□□□ -1.3
CACNA1A-242ENST00000637485 A8MUN3 132 aa6.93□□□□□ -1.3
CACNA1A-242ENST00000637485 LINC00337Q8N6G1 96 aa6.93□□□□□ -1.3
CACNA1A-242ENST00000637485 IL17DQ8TAD2 202 aa6.93□□□□□ -1.3
CACNA1A-242ENST00000637485 ZNF580Q9UK33 172 aa6.93□□□□□ -1.3
CACNA1A-242ENST00000637485 LINC01546A6NGU7 62 aa6.92□□□□□ -1.3
CACNA1A-242ENST00000637485 Q9BRP9 147 aa6.92□□□□□ -1.3
CACNA1A-242ENST00000637485 OTOGLQ3ZCN5 2332 aa6.92□□□□□ -1.3
CACNA1A-242ENST00000637485 PRR14LQ5THK1 2151 aa6.92□□□□□ -1.3
CACNA1A-242ENST00000637485 DSCAMO60469 2012 aa6.91□□□□□ -1.3
CACNA1A-242ENST00000637485 C9orf116Q5BN46 136 aaPredicted RBP6.91□□□□□ -1.3
CACNA1A-242ENST00000637485 ARHGAP32A7KAX9 2087 aa6.91□□□□□ -1.3
CACNA1A-242ENST00000637485 C6orf48Q9UBA6 75 aa6.91□□□□□ -1.3
CACNA1A-242ENST00000637485 DEFB116Q30KQ4 102 aa6.91□□□□□ -1.3
CACNA1A-242ENST00000637485 C10orf99Q6UWK7 81 aa6.91□□□□□ -1.3
CACNA1A-242ENST00000637485 BRI3O95415 125 aa6.9□□□□□ -1.3
CACNA1A-242ENST00000637485 LOC110117498A0A087WWA1 95 aa6.9□□□□□ -1.3
CACNA1A-242ENST00000637485 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.9□□□□□ -1.3
CACNA1A-242ENST00000637485 LINC00482Q8N8I6 264 aa6.9□□□□□ -1.3
CACNA1A-242ENST00000637485 TM2D3Q9BRN9 247 aa6.9□□□□□ -1.3
CACNA1A-242ENST00000637485 CDSNQ15517 529 aa6.9□□□□□ -1.31
CACNA1A-242ENST00000637485 HCFC1P51610 2035 aa6.9□□□□□ -1.31
CACNA1A-242ENST00000637485 TRAV10A0A0B4J240 114 aa6.9□□□□□ -1.31
CACNA1A-242ENST00000637485 EP400Q96L91 3159 aa6.89□□□□□ -1.31
CACNA1A-242ENST00000637485 EXPH5Q8NEV8 1989 aa6.89□□□□□ -1.31
CACNA1A-242ENST00000637485 FAM208BQ5VWN6 2430 aa6.88□□□□□ -1.31
CACNA1A-242ENST00000637485 PRLHP81277 87 aa6.88□□□□□ -1.31
CACNA1A-242ENST00000637485 LOC101927531A0A1B0GV80 90 aa6.88□□□□□ -1.31
CACNA1A-242ENST00000637485 C11orf72Q8NBR9 251 aa6.87□□□□□ -1.31
CACNA1A-242ENST00000637485 Q6ZQT0 140 aa6.87□□□□□ -1.31
CACNA1A-242ENST00000637485 LINC01006Q8NI28 216 aa6.87□□□□□ -1.31
CACNA1A-242ENST00000637485 NHLRC4P0CG21 123 aaPredicted RBP6.87□□□□□ -1.31
CACNA1A-242ENST00000637485 SSBP3-AS1Q7Z2R9 100 aa6.87□□□□□ -1.31
CACNA1A-242ENST00000637485 IGLV5-39A0A0G2JS06 123 aa6.86□□□□□ -1.31
CACNA1A-242ENST00000637485 INAFM1C9JVW0 142 aa6.86□□□□□ -1.31
CACNA1A-242ENST00000637485 FSHBP01225 129 aa6.86□□□□□ -1.31
CACNA1A-242ENST00000637485 KLKP1Q107X0 134 aa6.86□□□□□ -1.31
CACNA1A-242ENST00000637485 UQCR11O14957 56 aa6.86□□□□□ -1.31
CACNA1A-242ENST00000637485 TRAV22A0A0B4J277 110 aa6.85□□□□□ -1.31
CACNA1A-242ENST00000637485 TANC2Q9HCD6 1990 aa6.85□□□□□ -1.31
CACNA1A-242ENST00000637485 PRR15Q8IV56 129 aa6.85□□□□□ -1.31
CACNA1A-242ENST00000637485 COL4A2P08572 1712 aa6.85□□□□□ -1.31
CACNA1A-242ENST00000637485 PTPRQQ9UMZ3 2332 aa6.85□□□□□ -1.31
CACNA1A-242ENST00000637485 C2orf48Q96LS8 159 aa6.85□□□□□ -1.31
CACNA1A-242ENST00000637485 IGLV4-60A0A075B6I1 120 aa6.84□□□□□ -1.31
CACNA1A-242ENST00000637485 LY6G6DO95868 133 aa6.84□□□□□ -1.31
CACNA1A-242ENST00000637485 ELOF1P60002 83 aaKnown RBP6.84□□□□□ -1.31
CACNA1A-242ENST00000637485 PLXNB1O43157 2135 aa6.84□□□□□ -1.31
CACNA1A-242ENST00000637485 CIRBP-AS1Q8TBR5 109 aa6.84□□□□□ -1.31
CACNA1A-242ENST00000637485 AVPP01185 164 aa6.83□□□□□ -1.32
CACNA1A-242ENST00000637485 Q8N2B8 174 aa6.83□□□□□ -1.32
CACNA1A-242ENST00000637485 C18orf65Q6ZTR6 163 aa6.83□□□□□ -1.32
CACNA1A-242ENST00000637485 C6orf223Q8N319 242 aa6.83□□□□□ -1.32
CACNA1A-242ENST00000637485 SRCAPQ6ZRS2 3230 aa6.83□□□□□ -1.32
CACNA1A-242ENST00000637485 A0A1B0GUV1 79 aa6.83□□□□□ -1.32
CACNA1A-242ENST00000637485 COA5Q86WW8 74 aa6.83□□□□□ -1.32
CACNA1A-242ENST00000637485 FAM218AQ96MZ4 157 aa6.83□□□□□ -1.32
CACNA1A-242ENST00000637485 A8MTW9 85 aa6.83□□□□□ -1.32
CACNA1A-242ENST00000637485 BDP1A6H8Y1 2624 aa6.82□□□□□ -1.32
CACNA1A-242ENST00000637485 KIAA0087Q14695 138 aa6.82□□□□□ -1.32
CACNA1A-242ENST00000637485 SMCR5Q8TEV8 140 aa6.82□□□□□ -1.32
CACNA1A-242ENST00000637485 ADAMTS20P59510 1910 aa6.81□□□□□ -1.32
CACNA1A-242ENST00000637485 IGKV2D-30A0A075B6S6 120 aa6.81□□□□□ -1.32
CACNA1A-242ENST00000637485 IGKV2-30P06310 120 aa6.81□□□□□ -1.32
CACNA1A-242ENST00000637485 ACACBO00763 2458 aa6.81□□□□□ -1.32
CACNA1A-242ENST00000637485 HIVEP2P31629 2446 aa6.81□□□□□ -1.32
CACNA1A-242ENST00000637485 LINC01600Q96MT4 127 aa6.8□□□□□ -1.32
CACNA1A-242ENST00000637485 A0A1W2PPR1 153 aa6.79□□□□□ -1.32
CACNA1A-242ENST00000637485 MIR22HGQ0VDD5 57 aa6.79□□□□□ -1.32
CACNA1A-242ENST00000637485 Q8NBF4 154 aa6.79□□□□□ -1.32
CACNA1A-242ENST00000637485 CRIPTQ9P021 101 aa6.79□□□□□ -1.32
CACNA1A-242ENST00000637485 H7BZZ5 65 aa6.78□□□□□ -1.32
CACNA1A-242ENST00000637485 C16orf95Q9H693 158 aa6.78□□□□□ -1.32
CACNA1A-242ENST00000637485 WNK1Q9H4A3 2382 aa6.78□□□□□ -1.32
CACNA1A-242ENST00000637485 CUL9Q8IWT3 2517 aa6.78□□□□□ -1.32
CACNA1A-242ENST00000637485 H3BS24 57 aa6.78□□□□□ -1.32
CACNA1A-242ENST00000637485 ODF3L2Q3SX64 289 aa6.78□□□□□ -1.32
CACNA1A-242ENST00000637485 SORL1Q92673 2214 aa6.78□□□□□ -1.32
CACNA1A-242ENST00000637485 RAI1Q7Z5J4 1906 aaPredicted RBP6.77□□□□□ -1.33
CACNA1A-242ENST00000637485 PLA2G1BP04054 148 aaKnown RBP6.77□□□□□ -1.33
CACNA1A-242ENST00000637485 IGLV5-45A0A087WSX0 123 aa6.77□□□□□ -1.33
CACNA1A-242ENST00000637485 SPG11Q96JI7 2443 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms