RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 H0Y8G0 127 aa11.11□□□□□ -0.63
CLN6-218ENST00000637223 IGKCP01834 107 aa11.11□□□□□ -0.63
CLN6-218ENST00000637223 IGLC3P0DOY3 106 aa11.1□□□□□ -0.63
CLN6-218ENST00000637223 LINC01561Q8N1V8 128 aa11.1□□□□□ -0.63
CLN6-218ENST00000637223 CHAC1Q9BUX1 264 aa11.1□□□□□ -0.63
CLN6-218ENST00000637223 MRPL35Q9NZE8 188 aaKnown RBP11.1□□□□□ -0.63
CLN6-218ENST00000637223 IGLV5-45A0A087WSX0 123 aa11.09□□□□□ -0.63
CLN6-218ENST00000637223 SYCNQ0VAF6 134 aa11.09□□□□□ -0.63
CLN6-218ENST00000637223 CARD19Q96LW7 228 aa11.09□□□□□ -0.63
CLN6-218ENST00000637223 CAMK2N2Q96S95 79 aa11.09□□□□□ -0.63
CLN6-218ENST00000637223 FAM30AQ9NZY2 134 aa11.09□□□□□ -0.63
CLN6-218ENST00000637223 HAMPP81172 84 aa11.08□□□□□ -0.64
CLN6-218ENST00000637223 Q6ZRU5 148 aa11.08□□□□□ -0.64
CLN6-218ENST00000637223 C2orf48Q96LS8 159 aa11.08□□□□□ -0.64
CLN6-218ENST00000637223 KIAA0087Q14695 138 aa11.07□□□□□ -0.64
CLN6-218ENST00000637223 TOMM7Q9P0U1 55 aa11.07□□□□□ -0.64
CLN6-218ENST00000637223 C11orf86A6NJI1 115 aa11.06□□□□□ -0.64
CLN6-218ENST00000637223 SMIM1B2RUZ4 78 aa11.06□□□□□ -0.64
CLN6-218ENST00000637223 TSTD3H0UI37 97 aa11.06□□□□□ -0.64
CLN6-218ENST00000637223 SPINK8P0C7L1 97 aa11.06□□□□□ -0.64
CLN6-218ENST00000637223 SDIM1Q6ZPB5 146 aa11.06□□□□□ -0.64
CLN6-218ENST00000637223 PMCHL2Q9BQD1 86 aa11.06□□□□□ -0.64
CLN6-218ENST00000637223 H3BRM9 83 aa11.05□□□□□ -0.64
CLN6-218ENST00000637223 ZNF22P17026 224 aaPredicted RBP11.05□□□□□ -0.64
CLN6-218ENST00000637223 SPATA45Q537H7 98 aa11.05□□□□□ -0.64
CLN6-218ENST00000637223 ATOH7Q8N100 152 aa11.05□□□□□ -0.64
CLN6-218ENST00000637223 NDUFA1O15239 70 aa11.04□□□□□ -0.64
CLN6-218ENST00000637223 PRSS2P07478 247 aa11.04□□□□□ -0.64
CLN6-218ENST00000637223 XGP55808 180 aa11.04□□□□□ -0.64
CLN6-218ENST00000637223 Q6ZSA8 131 aa11.04□□□□□ -0.64
CLN6-218ENST00000637223 PAM16Q9Y3D7 125 aa11.04□□□□□ -0.64
CLN6-218ENST00000637223 TMEM170BQ5T4T1 132 aa11.03□□□□□ -0.64
CLN6-218ENST00000637223 C10orf25Q5T742 122 aa11.03□□□□□ -0.64
CLN6-218ENST00000637223 C2orf82Q6UX34 121 aa11.03□□□□□ -0.64
CLN6-218ENST00000637223 UNQ6190/PRO20217Q6UXQ8 127 aa11.03□□□□□ -0.64
CLN6-218ENST00000637223 DMBT1Q9UGM3 2413 aaPredicted RBP11.02□□□□□ -0.65
CLN6-218ENST00000637223 F8WDY8 70 aa11.02□□□□□ -0.65
CLN6-218ENST00000637223 C6orf226Q5I0X4 101 aa11.02□□□□□ -0.65
CLN6-218ENST00000637223 Q8IZM0 81 aa11.02□□□□□ -0.65
CLN6-218ENST00000637223 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.02□□□□□ -0.65
CLN6-218ENST00000637223 PANO1I0J062 215 aa11.01□□□□□ -0.65
CLN6-218ENST00000637223 CHTF8P0CG12 524 aa11.01□□□□□ -0.65
CLN6-218ENST00000637223 HERVK_113P61574 105 aa11.01□□□□□ -0.65
CLN6-218ENST00000637223 COX7B2Q8TF08 81 aa11.01□□□□□ -0.65
CLN6-218ENST00000637223 CKS1BP61024 79 aa11□□□□□ -0.65
CLN6-218ENST00000637223 C6orf48Q9UBA6 75 aa11□□□□□ -0.65
CLN6-218ENST00000637223 IGKV2-24A0A0C4DH68 120 aa10.99□□□□□ -0.65
CLN6-218ENST00000637223 DLEU1O43261 78 aa10.99□□□□□ -0.65
CLN6-218ENST00000637223 SCXQ7RTU7 201 aa10.99□□□□□ -0.65
CLN6-218ENST00000637223 A0A096LNI7 61 aa10.98□□□□□ -0.65
CLN6-218ENST00000637223 LOC107984640A0A0U1RRK4 108 aa10.98□□□□□ -0.65
CLN6-218ENST00000637223 E9PLD3 99 aa10.98□□□□□ -0.65
CLN6-218ENST00000637223 RNF151Q2KHN1 245 aa10.98□□□□□ -0.65
CLN6-218ENST00000637223 MAJINQ3KP22 176 aa10.98□□□□□ -0.65
CLN6-218ENST00000637223 STPG4Q8N801 248 aa10.98□□□□□ -0.65
CLN6-218ENST00000637223 MIEN1Q9BRT3 115 aa10.98□□□□□ -0.65
CLN6-218ENST00000637223 UQCR10Q9UDW1 63 aa10.98□□□□□ -0.65
CLN6-218ENST00000637223 IGLV5-39A0A0G2JS06 123 aa10.97□□□□□ -0.65
CLN6-218ENST00000637223 COX8AP10176 69 aa10.97□□□□□ -0.65
CLN6-218ENST00000637223 RPL18AQ02543 176 aaKnown RBP10.97□□□□□ -0.65
CLN6-218ENST00000637223 PKIGQ9Y2B9 76 aa10.97□□□□□ -0.65
CLN6-218ENST00000637223 TRBV30A0A0K0K1B3 111 aa10.96□□□□□ -0.65
CLN6-218ENST00000637223 TMEM223A0PJW6 202 aa10.96□□□□□ -0.65
CLN6-218ENST00000637223 GAGE2BQ13066 116 aa10.96□□□□□ -0.65
CLN6-218ENST00000637223 ANKRD39Q53RE8 183 aa10.96□□□□□ -0.65
CLN6-218ENST00000637223 C9orf116Q5BN46 136 aaPredicted RBP10.96□□□□□ -0.65
CLN6-218ENST00000637223 CIRBP-AS1Q8TBR5 109 aa10.96□□□□□ -0.65
CLN6-218ENST00000637223 SPACA4Q8TDM5 124 aa10.96□□□□□ -0.65
CLN6-218ENST00000637223 DPH3Q96FX2 82 aa10.96□□□□□ -0.65
CLN6-218ENST00000637223 EPM2AB3EWF7 344 aa10.95□□□□□ -0.66
CLN6-218ENST00000637223 INAFM2P0DMQ5 153 aa10.95□□□□□ -0.66
CLN6-218ENST00000637223 CXCL5P42830 114 aa10.95□□□□□ -0.66
CLN6-218ENST00000637223 CIRBPQ14011 172 aaKnown RBP10.95□□□□□ -0.66
CLN6-218ENST00000637223 SLC25A34Q6PIV7 304 aa10.95□□□□□ -0.66
CLN6-218ENST00000637223 SMR3BP02814 79 aaPredicted RBP10.94□□□□□ -0.66
CLN6-218ENST00000637223 PTTG1IPP53801 180 aa10.94□□□□□ -0.66
CLN6-218ENST00000637223 PRO1933Q9H354 126 aa10.94□□□□□ -0.66
CLN6-218ENST00000637223 DDTP30046 118 aa10.93□□□□□ -0.66
CLN6-218ENST00000637223 BOD1L2Q8IYS8 172 aa10.93□□□□□ -0.66
CLN6-218ENST00000637223 PLEKHB2Q96CS7 222 aa10.93□□□□□ -0.66
CLN6-218ENST00000637223 A0A087WYN8 130 aa10.92□□□□□ -0.66
CLN6-218ENST00000637223 LEPROTO15243 131 aa10.92□□□□□ -0.66
CLN6-218ENST00000637223 TLX1NBP0CAT3 122 aa10.91□□□□□ -0.66
CLN6-218ENST00000637223 NMUP48645 174 aa10.91□□□□□ -0.66
CLN6-218ENST00000637223 GAGE2EQ4V326 116 aa10.91□□□□□ -0.66
CLN6-218ENST00000637223 Q6ZRP5 223 aa10.91□□□□□ -0.66
CLN6-218ENST00000637223 C14orf144Q96I85 54 aa10.91□□□□□ -0.66
CLN6-218ENST00000637223 LINC00474Q9P2X8 69 aa10.91□□□□□ -0.66
CLN6-218ENST00000637223 GAGE2DQ9UEU5 116 aa10.91□□□□□ -0.66
CLN6-218ENST00000637223 IGKV2D-26A0A0A0MRZ7 120 aa10.89□□□□□ -0.67
CLN6-218ENST00000637223 NDUFC2-KCTD14E9PQ53 114 aa10.89□□□□□ -0.67
CLN6-218ENST00000637223 FAT1Q14517 4588 aa10.88□□□□□ -0.67
CLN6-218ENST00000637223 J3QQQ9 107 aa10.88□□□□□ -0.67
CLN6-218ENST00000637223 PLAC8Q9NZF1 115 aa10.88□□□□□ -0.67
CLN6-218ENST00000637223 PCP4L1A6NKN8 68 aa10.87□□□□□ -0.67
CLN6-218ENST00000637223 LGALS3P17931 250 aaKnown RBP10.87□□□□□ -0.67
CLN6-218ENST00000637223 ZNF625Q96I27 306 aaPredicted RBP10.87□□□□□ -0.67
CLN6-218ENST00000637223 HIGD1BQ9P298 99 aa10.87□□□□□ -0.67
CLN6-218ENST00000637223 MYMXA0A1B0GTQ4 84 aa10.86□□□□□ -0.67
CLN6-218ENST00000637223 HNRNPA3P51991 378 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms