RNA–Protein interactions for RNA: ENST00000636652.1

CHRNA4-216, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 195 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-216ENST00000636652 SLPIP03973 132 aa8.7□□□□□ -1.02
CHRNA4-216ENST00000636652 LGALS3P17931 250 aaKnown RBP8.7□□□□□ -1.02
CHRNA4-216ENST00000636652 MAJINQ3KP22 176 aa8.7□□□□□ -1.02
CHRNA4-216ENST00000636652 C2orf82Q6UX34 121 aa8.7□□□□□ -1.02
CHRNA4-216ENST00000636652 CARD19Q96LW7 228 aa8.7□□□□□ -1.02
CHRNA4-216ENST00000636652 IGKV2D-26A0A0A0MRZ7 120 aa8.69□□□□□ -1.02
CHRNA4-216ENST00000636652 NMUP48645 174 aa8.69□□□□□ -1.02
CHRNA4-216ENST00000636652 Q6ZRU5 148 aa8.69□□□□□ -1.02
CHRNA4-216ENST00000636652 ZNF625Q96I27 306 aaPredicted RBP8.69□□□□□ -1.02
CHRNA4-216ENST00000636652 VAMP8Q9BV40 100 aa8.69□□□□□ -1.02
CHRNA4-216ENST00000636652 PGPEP1Q9NXJ5 209 aa8.69□□□□□ -1.02
CHRNA4-216ENST00000636652 NDUFA12Q9UI09 145 aa8.69□□□□□ -1.02
CHRNA4-216ENST00000636652 DNAH11Q96DT5 4516 aa8.69□□□□□ -1.02
CHRNA4-216ENST00000636652 IGLV5-52A0A0A0MRZ9 124 aa8.68□□□□□ -1.02
CHRNA4-216ENST00000636652 TRBV30A0A0K0K1B3 111 aa8.68□□□□□ -1.02
CHRNA4-216ENST00000636652 A0A1B0GVY2 172 aa8.68□□□□□ -1.02
CHRNA4-216ENST00000636652 SMIM6P0DI80 62 aa8.68□□□□□ -1.02
CHRNA4-216ENST00000636652 RNF151Q2KHN1 245 aa8.68□□□□□ -1.02
CHRNA4-216ENST00000636652 C10orf25Q5T742 122 aa8.68□□□□□ -1.02
CHRNA4-216ENST00000636652 CDPF1Q6NVV7 123 aa8.68□□□□□ -1.02
CHRNA4-216ENST00000636652 UNQ6190/PRO20217Q6UXQ8 127 aa8.68□□□□□ -1.02
CHRNA4-216ENST00000636652 MYMXA0A1B0GTQ4 84 aa8.67□□□□□ -1.02
CHRNA4-216ENST00000636652 KRTAP10-2P60368 255 aa8.67□□□□□ -1.02
CHRNA4-216ENST00000636652 HERV-K104P63124 156 aa8.67□□□□□ -1.02
CHRNA4-216ENST00000636652 C6orf48Q9UBA6 75 aa8.67□□□□□ -1.02
CHRNA4-216ENST00000636652 C9orf163Q8N9P6 203 aa8.66□□□□□ -1.02
CHRNA4-216ENST00000636652 PAM16Q9Y3D7 125 aa8.66□□□□□ -1.02
CHRNA4-216ENST00000636652 SPATA45Q537H7 98 aa8.65□□□□□ -1.02
CHRNA4-216ENST00000636652 PKIGQ9Y2B9 76 aa8.65□□□□□ -1.02
CHRNA4-216ENST00000636652 ZNF815PA8K554 130 aa8.64□□□□□ -1.03
CHRNA4-216ENST00000636652 S100A12P80511 92 aa8.64□□□□□ -1.03
CHRNA4-216ENST00000636652 LINC00587B1AMM8 73 aa8.63□□□□□ -1.03
CHRNA4-216ENST00000636652 FUSP35637 526 aaKnown RBP eCLIP8.63□□□□□ -1.03
CHRNA4-216ENST00000636652 PCP2Q8IVA1 136 aa8.63□□□□□ -1.03
CHRNA4-216ENST00000636652 TTTY13Q9BZ97 58 aa8.63□□□□□ -1.03
CHRNA4-216ENST00000636652 ERG28Q9UKR5 140 aa8.63□□□□□ -1.03
CHRNA4-216ENST00000636652 TLX1NBP0CAT3 122 aa8.62□□□□□ -1.03
CHRNA4-216ENST00000636652 COX17Q14061 63 aa8.62□□□□□ -1.03
CHRNA4-216ENST00000636652 C9orf116Q5BN46 136 aaPredicted RBP8.62□□□□□ -1.03
CHRNA4-216ENST00000636652 PKD1P98161 4303 aa8.62□□□□□ -1.03
CHRNA4-216ENST00000636652 A0A0J9YXY3 114 aa8.61□□□□□ -1.03
CHRNA4-216ENST00000636652 LOC107984640A0A0U1RRK4 108 aa8.61□□□□□ -1.03
CHRNA4-216ENST00000636652 NDUFC2-KCTD14E9PQ53 114 aa8.61□□□□□ -1.03
CHRNA4-216ENST00000636652 COX8AP10176 69 aa8.61□□□□□ -1.03
CHRNA4-216ENST00000636652 GCSHP23434 173 aa8.61□□□□□ -1.03
CHRNA4-216ENST00000636652 MEIG1Q5JSS6 88 aa8.61□□□□□ -1.03
CHRNA4-216ENST00000636652 SDIM1Q6ZPB5 146 aa8.6□□□□□ -1.03
CHRNA4-216ENST00000636652 DLEU1O43261 78 aa8.59□□□□□ -1.03
CHRNA4-216ENST00000636652 TIMM17BO60830 172 aa8.59□□□□□ -1.03
CHRNA4-216ENST00000636652 PFN2P35080 140 aa8.59□□□□□ -1.03
CHRNA4-216ENST00000636652 CIRBPQ14011 172 aaKnown RBP8.59□□□□□ -1.03
CHRNA4-216ENST00000636652 LINC01620Q4KN68 170 aa8.59□□□□□ -1.03
CHRNA4-216ENST00000636652 SCGB1D4Q6XE38 83 aa8.59□□□□□ -1.03
CHRNA4-216ENST00000636652 BOD1L2Q8IYS8 172 aa8.59□□□□□ -1.03
CHRNA4-216ENST00000636652 C16orf90A8MZG2 172 aa8.58□□□□□ -1.04
CHRNA4-216ENST00000636652 SMIM13P0DJ93 91 aa8.58□□□□□ -1.04
CHRNA4-216ENST00000636652 LINC00158P58513 81 aa8.58□□□□□ -1.04
CHRNA4-216ENST00000636652 RPL18AQ02543 176 aaKnown RBP8.58□□□□□ -1.04
CHRNA4-216ENST00000636652 C14orf144Q96I85 54 aa8.58□□□□□ -1.04
CHRNA4-216ENST00000636652 HECTD4Q9Y4D8 3996 aa8.57□□□□□ -1.04
CHRNA4-216ENST00000636652 PTTG1IPP53801 180 aa8.57□□□□□ -1.04
CHRNA4-216ENST00000636652 SLC25A34Q6PIV7 304 aa8.57□□□□□ -1.04
CHRNA4-216ENST00000636652 Q6ZRP5 223 aa8.57□□□□□ -1.04
CHRNA4-216ENST00000636652 DYNC1H1Q14204 4646 aaKnown RBP8.57□□□□□ -1.04
CHRNA4-216ENST00000636652 DNAH5Q8TE73 4624 aa8.57□□□□□ -1.04
CHRNA4-216ENST00000636652 A0A096LNI7 61 aa8.56□□□□□ -1.04
CHRNA4-216ENST00000636652 KRTAP10-1P60331 282 aa8.56□□□□□ -1.04
CHRNA4-216ENST00000636652 GAGE2BQ13066 116 aa8.56□□□□□ -1.04
CHRNA4-216ENST00000636652 C12orf57Q99622 126 aa8.56□□□□□ -1.04
CHRNA4-216ENST00000636652 LINC00474Q9P2X8 69 aa8.56□□□□□ -1.04
CHRNA4-216ENST00000636652 A0A0U1RRA0 63 aa8.55□□□□□ -1.04
CHRNA4-216ENST00000636652 TMEM238C9JI98 176 aa8.55□□□□□ -1.04
CHRNA4-216ENST00000636652 GAGE2EQ4V326 116 aa8.55□□□□□ -1.04
CHRNA4-216ENST00000636652 MIR7-3HGQ8N6C7 128 aa8.55□□□□□ -1.04
CHRNA4-216ENST00000636652 LITAFQ99732 161 aa8.55□□□□□ -1.04
CHRNA4-216ENST00000636652 GAGE2DQ9UEU5 116 aa8.55□□□□□ -1.04
CHRNA4-216ENST00000636652 LINC00518Q8N0U6 118 aa8.54□□□□□ -1.04
CHRNA4-216ENST00000636652 SND1-IT1Q9HBX3 110 aa8.54□□□□□ -1.04
CHRNA4-216ENST00000636652 TP73-AS1Q9UF72 201 aa8.54□□□□□ -1.04
CHRNA4-216ENST00000636652 IGKV2-24A0A0C4DH68 120 aa8.53□□□□□ -1.04
CHRNA4-216ENST00000636652 CHTF8P0CG12 524 aa8.53□□□□□ -1.04
CHRNA4-216ENST00000636652 ADAMTSL4-AS1Q5T5F5 129 aa8.53□□□□□ -1.04
CHRNA4-216ENST00000636652 SPACA4Q8TDM5 124 aa8.53□□□□□ -1.04
CHRNA4-216ENST00000636652 SPANXDQ9BXN6 97 aa8.53□□□□□ -1.04
CHRNA4-216ENST00000636652 XAGE1AQ9HD64 81 aa8.53□□□□□ -1.04
CHRNA4-216ENST00000636652 SPANXCQ9NY87 97 aa8.53□□□□□ -1.04
CHRNA4-216ENST00000636652 UQCR10Q9UDW1 63 aa8.53□□□□□ -1.04
CHRNA4-216ENST00000636652 PKHD1P08F94 4074 aa8.53□□□□□ -1.04
CHRNA4-216ENST00000636652 C9orf129Q5T035 196 aaKnown RBP8.52□□□□□ -1.05
CHRNA4-216ENST00000636652 Q6ZSA8 131 aa8.52□□□□□ -1.05
CHRNA4-216ENST00000636652 Q6ZVH6 145 aa8.52□□□□□ -1.05
CHRNA4-216ENST00000636652 SPANXB1Q9NS25 103 aaPredicted RBP8.52□□□□□ -1.05
CHRNA4-216ENST00000636652 HIGD1BQ9P298 99 aa8.52□□□□□ -1.05
CHRNA4-216ENST00000636652 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.52□□□□□ -1.05
CHRNA4-216ENST00000636652 DAND5Q8N907 189 aa8.51□□□□□ -1.05
CHRNA4-216ENST00000636652 LOC107984156A0A0G2JMH3 177 aa8.5□□□□□ -1.05
CHRNA4-216ENST00000636652 PANO1I0J062 215 aa8.5□□□□□ -1.05
CHRNA4-216ENST00000636652 C2orf91Q6ZV80 131 aa8.5□□□□□ -1.05
CHRNA4-216ENST00000636652 ARL17AQ8IVW1 177 aa8.5□□□□□ -1.05
CHRNA4-216ENST00000636652 MIEN1Q9BRT3 115 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms