RNA–Protein interactions for RNA: ENST00000636602.1

CLN5-212, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 3

Gene CLN5, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-212ENST00000636602 SPANXA1Q9NS26 97 aa1.37□□□□□ -2.19
CLN5-212ENST00000636602 FKBP11Q9NYL4 201 aa1.37□□□□□ -2.19
CLN5-212ENST00000636602 V9GYH0 126 aa1.37□□□□□ -2.19
CLN5-212ENST00000636602 MAST4O15021 2626 aa1.37□□□□□ -2.19
CLN5-212ENST00000636602 WNK2Q9Y3S1 2297 aa1.37□□□□□ -2.19
CLN5-212ENST00000636602 CREBBPQ92793 2442 aa1.37□□□□□ -2.19
CLN5-212ENST00000636602 CCDC168Q8NDH2 2452 aa1.37□□□□□ -2.19
CLN5-212ENST00000636602 NIPBLQ6KC79 2804 aaeCLIP1.36□□□□□ -2.19
CLN5-212ENST00000636602 ABCA1O95477 2261 aa1.36□□□□□ -2.19
CLN5-212ENST00000636602 NAP1L6A6NFF2 107 aa1.36□□□□□ -2.19
CLN5-212ENST00000636602 PPYP01298 95 aa1.36□□□□□ -2.19
CLN5-212ENST00000636602 CD3DP04234 171 aa1.36□□□□□ -2.19
CLN5-212ENST00000636602 SAA1P0DJI8 122 aaPredicted RBP1.36□□□□□ -2.19
CLN5-212ENST00000636602 SAA2P0DJI9 122 aaPredicted RBP1.36□□□□□ -2.19
CLN5-212ENST00000636602 IL7P13232 177 aa1.36□□□□□ -2.19
CLN5-212ENST00000636602 CATR1Q13166 79 aa1.36□□□□□ -2.19
CLN5-212ENST00000636602 DEFB112Q30KQ8 113 aa1.36□□□□□ -2.19
CLN5-212ENST00000636602 TOMM5Q8N4H5 51 aa1.36□□□□□ -2.19
CLN5-212ENST00000636602 VSTM2AQ8TAG5 236 aa1.36□□□□□ -2.19
CLN5-212ENST00000636602 MAFIPQ8WZ33 124 aa1.36□□□□□ -2.19
CLN5-212ENST00000636602 NABP2Q9BQ15 211 aa1.36□□□□□ -2.19
CLN5-212ENST00000636602 COPZ2Q9P299 210 aa1.36□□□□□ -2.19
CLN5-212ENST00000636602 SCP2D1Q9UJQ7 156 aa1.36□□□□□ -2.19
CLN5-212ENST00000636602 HILPDAQ9Y5L2 63 aa1.36□□□□□ -2.19
CLN5-212ENST00000636602 F8P00451 2351 aa1.35□□□□□ -2.19
CLN5-212ENST00000636602 C3orf85A0A1B0GTC6 90 aa1.35□□□□□ -2.19
CLN5-212ENST00000636602 H3BUX3 64 aa1.35□□□□□ -2.19
CLN5-212ENST00000636602 NDUFA3O95167 84 aa1.35□□□□□ -2.19
CLN5-212ENST00000636602 FXYD4P59646 89 aa1.35□□□□□ -2.19
CLN5-212ENST00000636602 KRTAP10-4P60372 401 aaPredicted RBP1.35□□□□□ -2.19
CLN5-212ENST00000636602 UBA52P62987 128 aaKnown RBP1.35□□□□□ -2.19
CLN5-212ENST00000636602 PLGLAQ15195 96 aa1.35□□□□□ -2.19
CLN5-212ENST00000636602 IDO2Q6ZQW0 420 aa1.35□□□□□ -2.19
CLN5-212ENST00000636602 ZNF818PQ6ZRF7 136 aa1.35□□□□□ -2.19
CLN5-212ENST00000636602 OR8I2Q8N0Y5 310 aa1.35□□□□□ -2.19
CLN5-212ENST00000636602 Q8N6K4 173 aa1.35□□□□□ -2.19
CLN5-212ENST00000636602 LEAP2Q969E1 77 aa1.35□□□□□ -2.19
CLN5-212ENST00000636602 TSC22D3Q99576 134 aa1.35□□□□□ -2.19
CLN5-212ENST00000636602 FXYD6Q9H0Q3 95 aa1.35□□□□□ -2.19
CLN5-212ENST00000636602 WFDC10AQ9H1F0 79 aa1.35□□□□□ -2.19
CLN5-212ENST00000636602 CACFD1Q9UGQ2 172 aa1.35□□□□□ -2.19
CLN5-212ENST00000636602 NF1P21359 2839 aa1.35□□□□□ -2.19
CLN5-212ENST00000636602 NAV3Q8IVL0 2385 aa1.35□□□□□ -2.19
CLN5-212ENST00000636602 ANK2Q01484 3957 aa1.35□□□□□ -2.19
CLN5-212ENST00000636602 ACANP16112 2415 aa1.35□□□□□ -2.19
CLN5-212ENST00000636602 CLPSL1A2RUU4 121 aa1.34□□□□□ -2.19
CLN5-212ENST00000636602 CRYM-AS1A6NIL9 109 aa1.34□□□□□ -2.19
CLN5-212ENST00000636602 JMJD7-PLA2G4BH0Y9G9 81 aa1.34□□□□□ -2.19
CLN5-212ENST00000636602 H3BUA1 57 aa1.34□□□□□ -2.19
CLN5-212ENST00000636602 SNAPC5O75971 98 aa1.34□□□□□ -2.19
CLN5-212ENST00000636602 DPM2O94777 84 aa1.34□□□□□ -2.19
CLN5-212ENST00000636602 NDUFB6O95139 128 aa1.34□□□□□ -2.19
CLN5-212ENST00000636602 PRB3Q04118 309 aaPredicted RBP1.34□□□□□ -2.19
CLN5-212ENST00000636602 RPL39P5Q59GN2 51 aa1.34□□□□□ -2.19
CLN5-212ENST00000636602 CASC2Q6XLA1 102 aa1.34□□□□□ -2.19
CLN5-212ENST00000636602 C5orf56Q8N8D9 126 aa1.34□□□□□ -2.19
CLN5-212ENST00000636602 TMEM167AQ8TBQ9 72 aa1.34□□□□□ -2.19
CLN5-212ENST00000636602 LSM10Q969L4 123 aaKnown RBP1.34□□□□□ -2.19
CLN5-212ENST00000636602 PDCD10Q9BUL8 212 aa1.34□□□□□ -2.19
CLN5-212ENST00000636602 NAA60Q9H7X0 242 aa1.34□□□□□ -2.19
CLN5-212ENST00000636602 SPANXCQ9NY87 97 aa1.34□□□□□ -2.19
CLN5-212ENST00000636602 COA4Q9NYJ1 87 aa1.34□□□□□ -2.19
CLN5-212ENST00000636602 BET1LQ9NYM9 111 aa1.34□□□□□ -2.19
CLN5-212ENST00000636602 METTL1Q9UBP6 276 aaKnown RBP1.34□□□□□ -2.19
CLN5-212ENST00000636602 TLN2Q9Y4G6 2542 aa1.34□□□□□ -2.2
CLN5-212ENST00000636602 CSPG4Q6UVK1 2322 aa1.33□□□□□ -2.2
CLN5-212ENST00000636602 TRAV23DV6A0A075B6W5 121 aa1.33□□□□□ -2.2
CLN5-212ENST00000636602 LOC107984156A0A0G2JMH3 177 aa1.33□□□□□ -2.2
CLN5-212ENST00000636602 A0A1B0GX51 115 aa1.33□□□□□ -2.2
CLN5-212ENST00000636602 SNRPGP15A8MWD9 76 aa1.33□□□□□ -2.2
CLN5-212ENST00000636602 CORTO00230 105 aa1.33□□□□□ -2.2
CLN5-212ENST00000636602 SFT2D2O95562 160 aa1.33□□□□□ -2.2
CLN5-212ENST00000636602 IL5P05113 134 aa1.33□□□□□ -2.2
CLN5-212ENST00000636602 TRAPPC2P0DI81 140 aa1.33□□□□□ -2.2
CLN5-212ENST00000636602 TRAPPC2BP0DI82 140 aa1.33□□□□□ -2.2
CLN5-212ENST00000636602 SCGB1A1P11684 91 aa1.33□□□□□ -2.2
CLN5-212ENST00000636602 SLC25A6P12236 298 aa1.33□□□□□ -2.2
CLN5-212ENST00000636602 HIST1H1BP16401 226 aaKnown RBP1.33□□□□□ -2.2
CLN5-212ENST00000636602 BLCAPP62952 87 aa1.33□□□□□ -2.2
CLN5-212ENST00000636602 FXYD3Q14802 87 aa1.33□□□□□ -2.2
CLN5-212ENST00000636602 ARL17AQ8IVW1 177 aa1.33□□□□□ -2.2
CLN5-212ENST00000636602 TMEM14BQ9NUH8 114 aa1.33□□□□□ -2.2
CLN5-212ENST00000636602 TEP1Q99973 2627 aaKnown RBP1.33□□□□□ -2.2
CLN5-212ENST00000636602 SONP18583 2426 aaKnown RBP1.32□□□□□ -2.2
CLN5-212ENST00000636602 SETD2Q9BYW2 2564 aaPredicted RBP1.32□□□□□ -2.2
CLN5-212ENST00000636602 FLG2Q5D862 2391 aaPredicted RBP1.32□□□□□ -2.2
CLN5-212ENST00000636602 CMYA5Q8N3K9 4069 aa1.32□□□□□ -2.2
CLN5-212ENST00000636602 IGLC7A0M8Q6 106 aa1.32□□□□□ -2.2
CLN5-212ENST00000636602 FAM223BA6NKX1 122 aa1.32□□□□□ -2.2
CLN5-212ENST00000636602 NCR3O14931 201 aa1.32□□□□□ -2.2
CLN5-212ENST00000636602 PITX3O75364 302 aa1.32□□□□□ -2.2
CLN5-212ENST00000636602 IFNA17P01571 189 aa1.32□□□□□ -2.2
CLN5-212ENST00000636602 IGHV3-33P01772 117 aa1.32□□□□□ -2.2
CLN5-212ENST00000636602 HBDP02042 147 aa1.32□□□□□ -2.2
CLN5-212ENST00000636602 SLC25A4P12235 298 aa1.32□□□□□ -2.2
CLN5-212ENST00000636602 SNCAP37840 140 aa1.32□□□□□ -2.2
CLN5-212ENST00000636602 PRCDQ00LT1 54 aa1.32□□□□□ -2.2
CLN5-212ENST00000636602 SMCO1Q147U7 214 aa1.32□□□□□ -2.2
CLN5-212ENST00000636602 KLK9Q2XQG4 91 aa1.32□□□□□ -2.2
CLN5-212ENST00000636602 NMSQ5H8A3 153 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms