RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 SPATA45Q537H7 98 aa6.25□□□□□ -1.41
LINC00339-210ENST00000635675 Q8N1X5 172 aa6.25□□□□□ -1.41
LINC00339-210ENST00000635675 CHAC1Q9BUX1 264 aa6.25□□□□□ -1.41
LINC00339-210ENST00000635675 IGLV4-69A0A075B6H9 119 aa6.25□□□□□ -1.41
LINC00339-210ENST00000635675 IGHV3-64A0A075B6Q5 118 aa6.25□□□□□ -1.41
LINC00339-210ENST00000635675 HSBP1L1C9JCN9 74 aa6.25□□□□□ -1.41
LINC00339-210ENST00000635675 STPG4Q8N801 248 aa6.25□□□□□ -1.41
LINC00339-210ENST00000635675 PCP4L1A6NKN8 68 aa6.24□□□□□ -1.41
LINC00339-210ENST00000635675 SEC11AP67812 179 aa6.24□□□□□ -1.41
LINC00339-210ENST00000635675 SYCNQ0VAF6 134 aa6.24□□□□□ -1.41
LINC00339-210ENST00000635675 ANKRD39Q53RE8 183 aa6.24□□□□□ -1.41
LINC00339-210ENST00000635675 TMEM170BQ5T4T1 132 aa6.24□□□□□ -1.41
LINC00339-210ENST00000635675 SCXQ7RTU7 201 aa6.24□□□□□ -1.41
LINC00339-210ENST00000635675 LINC01561Q8N1V8 128 aa6.24□□□□□ -1.41
LINC00339-210ENST00000635675 C2orf48Q96LS8 159 aa6.24□□□□□ -1.41
LINC00339-210ENST00000635675 KRTAP4-5Q9BYR2 181 aa6.24□□□□□ -1.41
LINC00339-210ENST00000635675 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.24□□□□□ -1.41
LINC00339-210ENST00000635675 PANO1I0J062 215 aa6.23□□□□□ -1.41
LINC00339-210ENST00000635675 PLNP26678 52 aa6.23□□□□□ -1.41
LINC00339-210ENST00000635675 SPAG11BQ08648 103 aa6.23□□□□□ -1.41
LINC00339-210ENST00000635675 CIRBPQ14011 172 aaKnown RBP6.23□□□□□ -1.41
LINC00339-210ENST00000635675 CIRBP-AS1Q8TBR5 109 aa6.23□□□□□ -1.41
LINC00339-210ENST00000635675 ORAOV1Q8WV07 137 aa6.23□□□□□ -1.41
LINC00339-210ENST00000635675 CARD19Q96LW7 228 aa6.23□□□□□ -1.41
LINC00339-210ENST00000635675 GEMIN7Q9H840 131 aaKnown RBP6.23□□□□□ -1.41
LINC00339-210ENST00000635675 TP73-AS1Q9UF72 201 aa6.23□□□□□ -1.41
LINC00339-210ENST00000635675 F8WDY8 70 aa6.22□□□□□ -1.41
LINC00339-210ENST00000635675 SMR3BP02814 79 aaPredicted RBP6.22□□□□□ -1.41
LINC00339-210ENST00000635675 IGLC3P0DOY3 106 aa6.22□□□□□ -1.41
LINC00339-210ENST00000635675 NMUP48645 174 aa6.22□□□□□ -1.41
LINC00339-210ENST00000635675 HERVK_113P63121 156 aa6.22□□□□□ -1.41
LINC00339-210ENST00000635675 KIAA0087Q14695 138 aa6.22□□□□□ -1.41
LINC00339-210ENST00000635675 Q6ZRU5 148 aa6.22□□□□□ -1.41
LINC00339-210ENST00000635675 LINC00469Q8N7U9 141 aa6.22□□□□□ -1.41
LINC00339-210ENST00000635675 CAMK2N2Q96S95 79 aa6.22□□□□□ -1.41
LINC00339-210ENST00000635675 CDKN2A-AS1Q9UH64 79 aa6.22□□□□□ -1.41
LINC00339-210ENST00000635675 DNAH8Q96JB1 4490 aa6.21□□□□□ -1.42
LINC00339-210ENST00000635675 IGLV5-45A0A087WSX0 123 aa6.21□□□□□ -1.42
LINC00339-210ENST00000635675 TINCRA0A1B0GVN0 87 aa6.21□□□□□ -1.42
LINC00339-210ENST00000635675 SPINK8P0C7L1 97 aa6.21□□□□□ -1.42
LINC00339-210ENST00000635675 ZNF22P17026 224 aaPredicted RBP6.21□□□□□ -1.42
LINC00339-210ENST00000635675 CHTF8P0CG12 524 aa6.2□□□□□ -1.42
LINC00339-210ENST00000635675 SPACA4Q8TDM5 124 aa6.2□□□□□ -1.42
LINC00339-210ENST00000635675 C14orf144Q96I85 54 aa6.2□□□□□ -1.42
LINC00339-210ENST00000635675 TTTY13Q9BZ97 58 aa6.2□□□□□ -1.42
LINC00339-210ENST00000635675 IGKV2D-26A0A0A0MRZ7 120 aa6.19□□□□□ -1.42
LINC00339-210ENST00000635675 EPM2AB3EWF7 344 aa6.19□□□□□ -1.42
LINC00339-210ENST00000635675 HERVK_113P61574 105 aa6.19□□□□□ -1.42
LINC00339-210ENST00000635675 RNF151Q2KHN1 245 aa6.19□□□□□ -1.42
LINC00339-210ENST00000635675 C10orf25Q5T742 122 aa6.19□□□□□ -1.42
LINC00339-210ENST00000635675 A0A096LNI7 61 aa6.18□□□□□ -1.42
LINC00339-210ENST00000635675 NDUFA1O15239 70 aa6.18□□□□□ -1.42
LINC00339-210ENST00000635675 UNQ6190/PRO20217Q6UXQ8 127 aa6.18□□□□□ -1.42
LINC00339-210ENST00000635675 PKIGQ9Y2B9 76 aa6.18□□□□□ -1.42
LINC00339-210ENST00000635675 A0A087WYN8 130 aa6.17□□□□□ -1.42
LINC00339-210ENST00000635675 IGKV2-24A0A0C4DH68 120 aa6.17□□□□□ -1.42
LINC00339-210ENST00000635675 LOC107984640A0A0U1RRK4 108 aa6.17□□□□□ -1.42
LINC00339-210ENST00000635675 TMEM223A0PJW6 202 aa6.17□□□□□ -1.42
LINC00339-210ENST00000635675 SMIM1B2RUZ4 78 aa6.17□□□□□ -1.42
LINC00339-210ENST00000635675 TSTD3H0UI37 97 aa6.17□□□□□ -1.42
LINC00339-210ENST00000635675 FAM229AH3BQW9 127 aa6.17□□□□□ -1.42
LINC00339-210ENST00000635675 Q5VSD8 79 aa6.17□□□□□ -1.42
LINC00339-210ENST00000635675 C2orf82Q6UX34 121 aa6.17□□□□□ -1.42
LINC00339-210ENST00000635675 PCP2Q8IVA1 136 aa6.17□□□□□ -1.42
LINC00339-210ENST00000635675 DPH3Q96FX2 82 aa6.17□□□□□ -1.42
LINC00339-210ENST00000635675 PLAC8Q9NZF1 115 aa6.17□□□□□ -1.42
LINC00339-210ENST00000635675 C6orf48Q9UBA6 75 aa6.17□□□□□ -1.42
LINC00339-210ENST00000635675 PCLOQ9Y6V0 5065 aa6.17□□□□□ -1.42
LINC00339-210ENST00000635675 H3BRM9 83 aa6.16□□□□□ -1.42
LINC00339-210ENST00000635675 TSPEAR-AS2P59090 65 aa6.16□□□□□ -1.42
LINC00339-210ENST00000635675 C6orf226Q5I0X4 101 aa6.16□□□□□ -1.42
LINC00339-210ENST00000635675 Q8IZM0 81 aa6.16□□□□□ -1.42
LINC00339-210ENST00000635675 LINC00528Q8N1L1 170 aa6.16□□□□□ -1.42
LINC00339-210ENST00000635675 TOMM7Q9P0U1 55 aa6.16□□□□□ -1.42
LINC00339-210ENST00000635675 LINC00474Q9P2X8 69 aa6.16□□□□□ -1.42
LINC00339-210ENST00000635675 TRBV30A0A0K0K1B3 111 aa6.16□□□□□ -1.42
LINC00339-210ENST00000635675 PRSS2P07478 247 aa6.16□□□□□ -1.42
LINC00339-210ENST00000635675 LGALS3P17931 250 aaKnown RBP6.16□□□□□ -1.42
LINC00339-210ENST00000635675 PTTG1IPP53801 180 aa6.16□□□□□ -1.42
LINC00339-210ENST00000635675 SRRM2Q9UQ35 2752 aaKnown RBP6.15□□□□□ -1.42
LINC00339-210ENST00000635675 E9PLD3 99 aa6.15□□□□□ -1.43
LINC00339-210ENST00000635675 LEPROTO15243 131 aa6.15□□□□□ -1.43
LINC00339-210ENST00000635675 TLX1NBP0CAT3 122 aa6.15□□□□□ -1.43
LINC00339-210ENST00000635675 COX8AP10176 69 aa6.15□□□□□ -1.43
LINC00339-210ENST00000635675 CKS1BP61024 79 aa6.15□□□□□ -1.43
LINC00339-210ENST00000635675 GAGE2BQ13066 116 aa6.15□□□□□ -1.43
LINC00339-210ENST00000635675 SLC25A34Q6PIV7 304 aa6.15□□□□□ -1.43
LINC00339-210ENST00000635675 UQCR10Q9UDW1 63 aa6.15□□□□□ -1.43
LINC00339-210ENST00000635675 IGLV5-39A0A0G2JS06 123 aa6.14□□□□□ -1.43
LINC00339-210ENST00000635675 ZNF815PA8K554 130 aa6.14□□□□□ -1.43
LINC00339-210ENST00000635675 HNRNPA3P51991 378 aaKnown RBP6.14□□□□□ -1.43
LINC00339-210ENST00000635675 C4orf48Q5BLP8 95 aa6.14□□□□□ -1.43
LINC00339-210ENST00000635675 Q6ZRP5 223 aa6.14□□□□□ -1.43
LINC00339-210ENST00000635675 COX7B2Q8TF08 81 aa6.14□□□□□ -1.43
LINC00339-210ENST00000635675 PLEKHB2Q96CS7 222 aa6.14□□□□□ -1.43
LINC00339-210ENST00000635675 ABCA13Q86UQ4 5058 aa6.13□□□□□ -1.43
LINC00339-210ENST00000635675 J3QQQ9 107 aa6.13□□□□□ -1.43
LINC00339-210ENST00000635675 PLA2G1BP04054 148 aaKnown RBP6.13□□□□□ -1.43
LINC00339-210ENST00000635675 KRTAP10-4P60372 401 aaPredicted RBP6.13□□□□□ -1.43
LINC00339-210ENST00000635675 RPL18AQ02543 176 aaKnown RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms