RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 FAT3Q8TDW7 4589 aa9.82□□□□□ -0.84
SNRNP48-203ENST00000634363 MRPL35Q9NZE8 188 aaKnown RBP9.81□□□□□ -0.84
SNRNP48-203ENST00000634363 TOMM7Q9P0U1 55 aa9.81□□□□□ -0.84
SNRNP48-203ENST00000634363 IGLV5-45A0A087WSX0 123 aa9.8□□□□□ -0.84
SNRNP48-203ENST00000634363 LOC107984640A0A0U1RRK4 108 aa9.8□□□□□ -0.84
SNRNP48-203ENST00000634363 H3BRM9 83 aa9.8□□□□□ -0.84
SNRNP48-203ENST00000634363 FAM19A2Q8N3H0 131 aa9.8□□□□□ -0.84
SNRNP48-203ENST00000634363 SPACA4Q8TDM5 124 aa9.8□□□□□ -0.84
SNRNP48-203ENST00000634363 C7orf33Q8WU49 177 aa9.8□□□□□ -0.84
SNRNP48-203ENST00000634363 IFI27L1Q96BM0 104 aa9.8□□□□□ -0.84
SNRNP48-203ENST00000634363 LINC00474Q9P2X8 69 aa9.8□□□□□ -0.84
SNRNP48-203ENST00000634363 UBR4Q5T4S7 5183 aa9.8□□□□□ -0.84
SNRNP48-203ENST00000634363 A0A096LNI7 61 aa9.79□□□□□ -0.84
SNRNP48-203ENST00000634363 ATP6V1G1O75348 118 aa9.79□□□□□ -0.84
SNRNP48-203ENST00000634363 IGLC3P0DOY3 106 aa9.79□□□□□ -0.84
SNRNP48-203ENST00000634363 CKS1BP61024 79 aa9.79□□□□□ -0.84
SNRNP48-203ENST00000634363 RNF151Q2KHN1 245 aa9.79□□□□□ -0.84
SNRNP48-203ENST00000634363 MAJINQ3KP22 176 aa9.79□□□□□ -0.84
SNRNP48-203ENST00000634363 Q8IZM0 81 aa9.79□□□□□ -0.84
SNRNP48-203ENST00000634363 HMCN2Q8NDA2 5059 aa9.78□□□□□ -0.84
SNRNP48-203ENST00000634363 SMIM1B2RUZ4 78 aa9.78□□□□□ -0.84
SNRNP48-203ENST00000634363 RPL18AQ02543 176 aaKnown RBP9.78□□□□□ -0.84
SNRNP48-203ENST00000634363 KIAA0087Q14695 138 aa9.78□□□□□ -0.84
SNRNP48-203ENST00000634363 C6orf226Q5I0X4 101 aa9.78□□□□□ -0.84
SNRNP48-203ENST00000634363 LEPROTL1O95214 131 aa9.77□□□□□ -0.85
SNRNP48-203ENST00000634363 LINC00310P59036 64 aa9.77□□□□□ -0.85
SNRNP48-203ENST00000634363 GAGE2BQ13066 116 aa9.77□□□□□ -0.85
SNRNP48-203ENST00000634363 C2orf82Q6UX34 121 aa9.77□□□□□ -0.85
SNRNP48-203ENST00000634363 UNQ6190/PRO20217Q6UXQ8 127 aa9.77□□□□□ -0.85
SNRNP48-203ENST00000634363 PLAC8Q9NZF1 115 aa9.77□□□□□ -0.85
SNRNP48-203ENST00000634363 CHTOPQ9Y3Y2 248 aaKnown RBP9.77□□□□□ -0.85
SNRNP48-203ENST00000634363 TRBV30A0A0K0K1B3 111 aa9.76□□□□□ -0.85
SNRNP48-203ENST00000634363 HIST1H2BKO60814 126 aa9.76□□□□□ -0.85
SNRNP48-203ENST00000634363 HIST1H2BJP06899 126 aa9.76□□□□□ -0.85
SNRNP48-203ENST00000634363 SPINK8P0C7L1 97 aa9.76□□□□□ -0.85
SNRNP48-203ENST00000634363 HIST1H2BOP23527 126 aa9.76□□□□□ -0.85
SNRNP48-203ENST00000634363 HIST1H2BBP33778 126 aa9.76□□□□□ -0.85
SNRNP48-203ENST00000634363 PTTG1IPP53801 180 aa9.76□□□□□ -0.85
SNRNP48-203ENST00000634363 HIST1H2BDP58876 126 aa9.76□□□□□ -0.85
SNRNP48-203ENST00000634363 HIST1H2BCP62807 126 aa9.76□□□□□ -0.85
SNRNP48-203ENST00000634363 HIST2H2BEQ16778 126 aa9.76□□□□□ -0.85
SNRNP48-203ENST00000634363 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.76□□□□□ -0.85
SNRNP48-203ENST00000634363 C10orf25Q5T742 122 aa9.76□□□□□ -0.85
SNRNP48-203ENST00000634363 HIST1H2BHQ93079 126 aa9.76□□□□□ -0.85
SNRNP48-203ENST00000634363 HIST1H2BNQ99877 126 aa9.76□□□□□ -0.85
SNRNP48-203ENST00000634363 HIST1H2BMQ99879 126 aa9.76□□□□□ -0.85
SNRNP48-203ENST00000634363 C6orf48Q9UBA6 75 aa9.76□□□□□ -0.85
SNRNP48-203ENST00000634363 HSPB8Q9UJY1 196 aa9.76□□□□□ -0.85
SNRNP48-203ENST00000634363 PKHD1L1Q86WI1 4243 aa9.76□□□□□ -0.85
SNRNP48-203ENST00000634363 TRAV12-1A0A0B4J245 112 aa9.75□□□□□ -0.85
SNRNP48-203ENST00000634363 CXCL5P42830 114 aa9.75□□□□□ -0.85
SNRNP48-203ENST00000634363 ODF1Q14990 250 aa9.75□□□□□ -0.85
SNRNP48-203ENST00000634363 STPG4Q8N801 248 aa9.75□□□□□ -0.85
SNRNP48-203ENST00000634363 ZNF22P17026 224 aaPredicted RBP9.74□□□□□ -0.85
SNRNP48-203ENST00000634363 TMEM170BQ5T4T1 132 aa9.74□□□□□ -0.85
SNRNP48-203ENST00000634363 COX7B2Q8TF08 81 aa9.74□□□□□ -0.85
SNRNP48-203ENST00000634363 C11orf86A6NJI1 115 aa9.73□□□□□ -0.85
SNRNP48-203ENST00000634363 H0Y8G0 127 aa9.73□□□□□ -0.85
SNRNP48-203ENST00000634363 NUPR1O60356 82 aa9.73□□□□□ -0.85
SNRNP48-203ENST00000634363 FABP4P15090 132 aa9.73□□□□□ -0.85
SNRNP48-203ENST00000634363 LINC01600Q96MT4 127 aa9.73□□□□□ -0.85
SNRNP48-203ENST00000634363 F8VRH5 84 aa9.72□□□□□ -0.85
SNRNP48-203ENST00000634363 TLX1NBP0CAT3 122 aa9.72□□□□□ -0.85
SNRNP48-203ENST00000634363 NDUFC2-KCTD14E9PQ53 114 aa9.7□□□□□ -0.86
SNRNP48-203ENST00000634363 PRR3P79522 188 aaKnown RBP9.7□□□□□ -0.86
SNRNP48-203ENST00000634363 GAGE2EQ4V326 116 aa9.7□□□□□ -0.86
SNRNP48-203ENST00000634363 Q6ZRP5 223 aa9.7□□□□□ -0.86
SNRNP48-203ENST00000634363 GAGE2DQ9UEU5 116 aa9.7□□□□□ -0.86
SNRNP48-203ENST00000634363 IGLV5-39A0A0G2JS06 123 aa9.69□□□□□ -0.86
SNRNP48-203ENST00000634363 C9orf116Q5BN46 136 aaPredicted RBP9.69□□□□□ -0.86
SNRNP48-203ENST00000634363 MAP1LC3CQ9BXW4 147 aa9.68□□□□□ -0.86
SNRNP48-203ENST00000634363 PLNP26678 52 aa9.66□□□□□ -0.86
SNRNP48-203ENST00000634363 TMEM223A0PJW6 202 aa9.65□□□□□ -0.86
SNRNP48-203ENST00000634363 SFTA2Q6UW10 78 aa9.65□□□□□ -0.86
SNRNP48-203ENST00000634363 REG3GQ6UW15 175 aa9.65□□□□□ -0.86
SNRNP48-203ENST00000634363 SPINK6Q6UWN8 80 aa9.65□□□□□ -0.86
SNRNP48-203ENST00000634363 A0A1W2PNN7 141 aa9.64□□□□□ -0.87
SNRNP48-203ENST00000634363 KRTAP10-8P60410 259 aa9.64□□□□□ -0.87
SNRNP48-203ENST00000634363 COA6Q5JTJ3 125 aaKnown RBP9.64□□□□□ -0.87
SNRNP48-203ENST00000634363 DPM2O94777 84 aa9.63□□□□□ -0.87
SNRNP48-203ENST00000634363 FAM19A5Q7Z5A7 132 aaPredicted RBP9.62□□□□□ -0.87
SNRNP48-203ENST00000634363 PMCHL2Q9BQD1 86 aa9.62□□□□□ -0.87
SNRNP48-203ENST00000634363 FAM168BA1KXE4 195 aa9.61□□□□□ -0.87
SNRNP48-203ENST00000634363 SYS1-DBNDD2H3BUS1 97 aa9.61□□□□□ -0.87
SNRNP48-203ENST00000634363 IGKCP01834 107 aa9.61□□□□□ -0.87
SNRNP48-203ENST00000634363 HERVK_113P61574 105 aa9.61□□□□□ -0.87
SNRNP48-203ENST00000634363 C9orf129Q5T035 196 aaKnown RBP9.61□□□□□ -0.87
SNRNP48-203ENST00000634363 XAGE1AQ9HD64 81 aa9.61□□□□□ -0.87
SNRNP48-203ENST00000634363 PFN2P35080 140 aa9.59□□□□□ -0.87
SNRNP48-203ENST00000634363 SRSF9Q13242 221 aaKnown RBP eCLIP9.59□□□□□ -0.87
SNRNP48-203ENST00000634363 ZNF625Q96I27 306 aaPredicted RBP9.59□□□□□ -0.87
SNRNP48-203ENST00000634363 ERG28Q9UKR5 140 aa9.59□□□□□ -0.87
SNRNP48-203ENST00000634363 M0QXV9 152 aa9.58□□□□□ -0.88
SNRNP48-203ENST00000634363 PHF5AQ7RTV0 110 aaKnown RBP9.58□□□□□ -0.88
SNRNP48-203ENST00000634363 COX17Q14061 63 aa9.57□□□□□ -0.88
SNRNP48-203ENST00000634363 PET117Q6UWS5 81 aa9.57□□□□□ -0.88
SNRNP48-203ENST00000634363 PLEKHB2Q96CS7 222 aa9.57□□□□□ -0.88
SNRNP48-203ENST00000634363 LEPROTO15243 131 aa9.56□□□□□ -0.88
SNRNP48-203ENST00000634363 KRTDAPP60985 99 aa9.56□□□□□ -0.88
SNRNP48-203ENST00000634363 NDUFA12Q9UI09 145 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms