RNA–Protein interactions for RNA: ENST00000628516.1

LINC00628-201, long intergenic non-protein coding RNA 628, humanhuman

BASIC

Gene LINC00628, Length 1,289 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00628-201ENST00000628516 SYCNQ0VAF6 134 aa10.32□□□□□ -0.76
LINC00628-201ENST00000628516 FAM19A3Q7Z5A8 133 aa10.32□□□□□ -0.76
LINC00628-201ENST00000628516 PLA2G2DQ9UNK4 145 aa10.32□□□□□ -0.76
LINC00628-201ENST00000628516 SEC11AP67812 179 aa10.31□□□□□ -0.76
LINC00628-201ENST00000628516 GEMIN7Q9H840 131 aaKnown RBP10.31□□□□□ -0.76
LINC00628-201ENST00000628516 TNXBP22105 4242 aa10.3□□□□□ -0.76
LINC00628-201ENST00000628516 A0A087WZ39 114 aa10.3□□□□□ -0.76
LINC00628-201ENST00000628516 MT1HL1P0DM35 61 aa10.3□□□□□ -0.76
LINC00628-201ENST00000628516 HERVK_113P63121 156 aa10.3□□□□□ -0.76
LINC00628-201ENST00000628516 ORAOV1Q8WV07 137 aa10.3□□□□□ -0.76
LINC00628-201ENST00000628516 IGLV4-69A0A075B6H9 119 aa10.29□□□□□ -0.76
LINC00628-201ENST00000628516 PRR3P79522 188 aaKnown RBP10.29□□□□□ -0.76
LINC00628-201ENST00000628516 SPAG11BQ08648 103 aa10.29□□□□□ -0.76
LINC00628-201ENST00000628516 IFI27L1Q96BM0 104 aa10.29□□□□□ -0.76
LINC00628-201ENST00000628516 TINCRA0A1B0GVN0 87 aa10.28□□□□□ -0.76
LINC00628-201ENST00000628516 LINC00469Q8N7U9 141 aa10.28□□□□□ -0.76
LINC00628-201ENST00000628516 CDKN2A-AS1Q9UH64 79 aa10.28□□□□□ -0.76
LINC00628-201ENST00000628516 GAGE2BQ13066 116 aa10.27□□□□□ -0.77
LINC00628-201ENST00000628516 OR10D4PQ8NGN7 298 aa10.27□□□□□ -0.77
LINC00628-201ENST00000628516 LOC107984640A0A0U1RRK4 108 aa10.26□□□□□ -0.77
LINC00628-201ENST00000628516 LEPROTL1O95214 131 aa10.26□□□□□ -0.77
LINC00628-201ENST00000628516 PTTG1IPP53801 180 aa10.26□□□□□ -0.77
LINC00628-201ENST00000628516 LINC01561Q8N1V8 128 aa10.26□□□□□ -0.77
LINC00628-201ENST00000628516 CAMK2N2Q96S95 79 aa10.26□□□□□ -0.77
LINC00628-201ENST00000628516 FABP4P15090 132 aa10.25□□□□□ -0.77
LINC00628-201ENST00000628516 C2orf48Q96LS8 159 aa10.25□□□□□ -0.77
LINC00628-201ENST00000628516 IGLC3P0DOY3 106 aa10.24□□□□□ -0.77
LINC00628-201ENST00000628516 PACRGQ96M98 296 aaPredicted RBP10.24□□□□□ -0.77
LINC00628-201ENST00000628516 CHTOPQ9Y3Y2 248 aaKnown RBP10.24□□□□□ -0.77
LINC00628-201ENST00000628516 IGLV5-45A0A087WSX0 123 aa10.23□□□□□ -0.77
LINC00628-201ENST00000628516 TRAV12-1A0A0B4J245 112 aa10.23□□□□□ -0.77
LINC00628-201ENST00000628516 H0Y8G0 127 aa10.23□□□□□ -0.77
LINC00628-201ENST00000628516 TOMM7Q9P0U1 55 aa10.23□□□□□ -0.77
LINC00628-201ENST00000628516 HSPB8Q9UJY1 196 aa10.23□□□□□ -0.77
LINC00628-201ENST00000628516 SPINK8P0C7L1 97 aa10.22□□□□□ -0.77
LINC00628-201ENST00000628516 KIAA0087Q14695 138 aa10.22□□□□□ -0.77
LINC00628-201ENST00000628516 C11orf86A6NJI1 115 aa10.21□□□□□ -0.77
LINC00628-201ENST00000628516 SMIM1B2RUZ4 78 aa10.21□□□□□ -0.77
LINC00628-201ENST00000628516 PRSS2P07478 247 aa10.21□□□□□ -0.77
LINC00628-201ENST00000628516 ZNF22P17026 224 aaPredicted RBP10.21□□□□□ -0.77
LINC00628-201ENST00000628516 RPL18AQ02543 176 aaKnown RBP10.21□□□□□ -0.77
LINC00628-201ENST00000628516 Q6ZRP5 223 aa10.21□□□□□ -0.77
LINC00628-201ENST00000628516 A0A1W2PNN7 141 aa10.2□□□□□ -0.78
LINC00628-201ENST00000628516 H3BRM9 83 aa10.2□□□□□ -0.78
LINC00628-201ENST00000628516 NDUFA1O15239 70 aa10.2□□□□□ -0.78
LINC00628-201ENST00000628516 COA6Q5JTJ3 125 aaKnown RBP10.2□□□□□ -0.78
LINC00628-201ENST00000628516 C10orf25Q5T742 122 aa10.2□□□□□ -0.78
LINC00628-201ENST00000628516 UNQ6190/PRO20217Q6UXQ8 127 aa10.2□□□□□ -0.78
LINC00628-201ENST00000628516 LINC01600Q96MT4 127 aa10.2□□□□□ -0.78
LINC00628-201ENST00000628516 MRPL35Q9NZE8 188 aaKnown RBP10.2□□□□□ -0.78
LINC00628-201ENST00000628516 F8WDY8 70 aa10.19□□□□□ -0.78
LINC00628-201ENST00000628516 TMEM170BQ5T4T1 132 aa10.19□□□□□ -0.78
LINC00628-201ENST00000628516 SPINK6Q6UWN8 80 aa10.19□□□□□ -0.78
LINC00628-201ENST00000628516 C2orf82Q6UX34 121 aa10.19□□□□□ -0.78
LINC00628-201ENST00000628516 F8VRH5 84 aa10.18□□□□□ -0.78
LINC00628-201ENST00000628516 ODF1Q14990 250 aa10.18□□□□□ -0.78
LINC00628-201ENST00000628516 C9orf116Q5BN46 136 aaPredicted RBP10.18□□□□□ -0.78
LINC00628-201ENST00000628516 C6orf226Q5I0X4 101 aa10.18□□□□□ -0.78
LINC00628-201ENST00000628516 Q8IZM0 81 aa10.18□□□□□ -0.78
LINC00628-201ENST00000628516 RNF151Q2KHN1 245 aa10.17□□□□□ -0.78
LINC00628-201ENST00000628516 REG3GQ6UW15 175 aa10.17□□□□□ -0.78
LINC00628-201ENST00000628516 COX7B2Q8TF08 81 aa10.17□□□□□ -0.78
LINC00628-201ENST00000628516 MAP1LC3CQ9BXW4 147 aa10.17□□□□□ -0.78
LINC00628-201ENST00000628516 CKS1BP61024 79 aa10.16□□□□□ -0.78
LINC00628-201ENST00000628516 SRSF9Q13242 221 aaKnown RBP eCLIP10.16□□□□□ -0.78
LINC00628-201ENST00000628516 C6orf48Q9UBA6 75 aa10.16□□□□□ -0.78
LINC00628-201ENST00000628516 PMCHL2Q9BQD1 86 aa10.15□□□□□ -0.78
LINC00628-201ENST00000628516 IGLV5-39A0A0G2JS06 123 aa10.13□□□□□ -0.79
LINC00628-201ENST00000628516 TRBV30A0A0K0K1B3 111 aa10.13□□□□□ -0.79
LINC00628-201ENST00000628516 PHF5AQ7RTV0 110 aaKnown RBP10.13□□□□□ -0.79
LINC00628-201ENST00000628516 PSORS1C2Q9UIG4 136 aa10.13□□□□□ -0.79
LINC00628-201ENST00000628516 TMEM223A0PJW6 202 aa10.12□□□□□ -0.79
LINC00628-201ENST00000628516 SYS1-DBNDD2H3BUS1 97 aa10.12□□□□□ -0.79
LINC00628-201ENST00000628516 CXCL5P42830 114 aa10.12□□□□□ -0.79
LINC00628-201ENST00000628516 LRP2P98164 4655 aa10.12□□□□□ -0.79
LINC00628-201ENST00000628516 DPM2O94777 84 aa10.11□□□□□ -0.79
LINC00628-201ENST00000628516 PLNP26678 52 aa10.11□□□□□ -0.79
LINC00628-201ENST00000628516 S100A6P06703 90 aa10.1□□□□□ -0.79
LINC00628-201ENST00000628516 TLX1NBP0CAT3 122 aa10.1□□□□□ -0.79
LINC00628-201ENST00000628516 KRTAP10-8P60410 259 aa10.1□□□□□ -0.79
LINC00628-201ENST00000628516 C1orf137Q5JT78 98 aa10.1□□□□□ -0.79
LINC00628-201ENST00000628516 IGKCP01834 107 aa10.09□□□□□ -0.79
LINC00628-201ENST00000628516 C3orf79P0CE67 100 aa10.09□□□□□ -0.79
LINC00628-201ENST00000628516 KRTDAPP60985 99 aa10.09□□□□□ -0.79
LINC00628-201ENST00000628516 GAGE2EQ4V326 116 aa10.09□□□□□ -0.79
LINC00628-201ENST00000628516 HIST3H2BBQ8N257 126 aa10.09□□□□□ -0.79
LINC00628-201ENST00000628516 GAGE2DQ9UEU5 116 aa10.09□□□□□ -0.79
LINC00628-201ENST00000628516 FAM168BA1KXE4 195 aa10.08□□□□□ -0.8
LINC00628-201ENST00000628516 PET117Q6UWS5 81 aa10.08□□□□□ -0.8
LINC00628-201ENST00000628516 LINC01545Q5VT33 79 aa10.07□□□□□ -0.8
LINC00628-201ENST00000628516 FAM19A5Q7Z5A7 132 aaPredicted RBP10.07□□□□□ -0.8
LINC00628-201ENST00000628516 NDUFC2-KCTD14E9PQ53 114 aa10.06□□□□□ -0.8
LINC00628-201ENST00000628516 S100A2P29034 98 aa10.06□□□□□ -0.8
LINC00628-201ENST00000628516 SNRPEP62304 92 aaKnown RBP10.05□□□□□ -0.8
LINC00628-201ENST00000628516 HERVK_113P61574 105 aa10.04□□□□□ -0.8
LINC00628-201ENST00000628516 ZNF625Q96I27 306 aaPredicted RBP10.04□□□□□ -0.8
LINC00628-201ENST00000628516 HIST1H2BLQ99880 126 aa10.04□□□□□ -0.8
LINC00628-201ENST00000628516 IGLV7-43P04211 117 aa10.03□□□□□ -0.8
LINC00628-201ENST00000628516 LEPROTO15243 131 aa10.02□□□□□ -0.81
LINC00628-201ENST00000628516 KRTAP11-1Q8IUC1 163 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms