RNA–Protein interactions for RNA: ENST00000627864.1

MECP2-216, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3

Gene MECP2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-216ENST00000627864 C10orf25Q5T742 122 aa12.15□□□□□ -0.46
MECP2-216ENST00000627864 HECTD4Q9Y4D8 3996 aa12.14□□□□□ -0.47
MECP2-216ENST00000627864 SDIM1Q6ZPB5 146 aa12.13□□□□□ -0.47
MECP2-216ENST00000627864 C20orf202A1L168 122 aa12.12□□□□□ -0.47
MECP2-216ENST00000627864 C6orf48Q9UBA6 75 aa12.12□□□□□ -0.47
MECP2-216ENST00000627864 CXCL5P42830 114 aa12.11□□□□□ -0.47
MECP2-216ENST00000627864 RNF151Q2KHN1 245 aa12.11□□□□□ -0.47
MECP2-216ENST00000627864 HERVK_113P61574 105 aa12.1□□□□□ -0.47
MECP2-216ENST00000627864 EPPK1P58107 5090 aaKnown RBP12.1□□□□□ -0.47
MECP2-216ENST00000627864 TRBV30A0A0K0K1B3 111 aa12.09□□□□□ -0.47
MECP2-216ENST00000627864 FAM30AQ9NZY2 134 aa12.09□□□□□ -0.47
MECP2-216ENST00000627864 LOC107984640A0A0U1RRK4 108 aa12.08□□□□□ -0.48
MECP2-216ENST00000627864 PKIGQ9Y2B9 76 aa12.08□□□□□ -0.48
MECP2-216ENST00000627864 C9orf116Q5BN46 136 aaPredicted RBP12.07□□□□□ -0.48
MECP2-216ENST00000627864 PKHD1P08F94 4074 aa12.06□□□□□ -0.48
MECP2-216ENST00000627864 LEPROTO15243 131 aa12.06□□□□□ -0.48
MECP2-216ENST00000627864 ATOH7Q8N100 152 aa12.06□□□□□ -0.48
MECP2-216ENST00000627864 PLEKHB2Q96CS7 222 aa12.06□□□□□ -0.48
MECP2-216ENST00000627864 A0A096LNI7 61 aa12.05□□□□□ -0.48
MECP2-216ENST00000627864 IGKV2-24A0A0C4DH68 120 aa12.05□□□□□ -0.48
MECP2-216ENST00000627864 CHTF8P0CG12 524 aa12.05□□□□□ -0.48
MECP2-216ENST00000627864 RPL18AQ02543 176 aaKnown RBP12.05□□□□□ -0.48
MECP2-216ENST00000627864 GAGE2BQ13066 116 aa12.05□□□□□ -0.48
MECP2-216ENST00000627864 STPG4Q8N801 248 aa12.05□□□□□ -0.48
MECP2-216ENST00000627864 DNAH5Q8TE73 4624 aa12.05□□□□□ -0.48
MECP2-216ENST00000627864 AKR1D1P51857 326 aa12.04□□□□□ -0.48
MECP2-216ENST00000627864 Q6ZSA8 131 aa12.04□□□□□ -0.48
MECP2-216ENST00000627864 DPH3Q96FX2 82 aa12.04□□□□□ -0.48
MECP2-216ENST00000627864 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.04□□□□□ -0.48
MECP2-216ENST00000627864 PANO1I0J062 215 aa12.03□□□□□ -0.48
MECP2-216ENST00000627864 ZNF625Q96I27 306 aaPredicted RBP12.03□□□□□ -0.48
MECP2-216ENST00000627864 E9PLD3 99 aa12.02□□□□□ -0.49
MECP2-216ENST00000627864 J3QQQ9 107 aa12.02□□□□□ -0.49
MECP2-216ENST00000627864 SCGB1D1O95968 90 aa12.02□□□□□ -0.49
MECP2-216ENST00000627864 TLX1NBP0CAT3 122 aa12.02□□□□□ -0.49
MECP2-216ENST00000627864 TSPEAR-AS2P59090 65 aa12.02□□□□□ -0.49
MECP2-216ENST00000627864 HAMPP81172 84 aa12.02□□□□□ -0.49
MECP2-216ENST00000627864 NDUFC2-KCTD14E9PQ53 114 aa12.01□□□□□ -0.49
MECP2-216ENST00000627864 LGALS3P17931 250 aaKnown RBP12.01□□□□□ -0.49
MECP2-216ENST00000627864 PTTG1IPP53801 180 aa12.01□□□□□ -0.49
MECP2-216ENST00000627864 MAJINQ3KP22 176 aa12.01□□□□□ -0.49
MECP2-216ENST00000627864 SFTA2Q6UW10 78 aa12.01□□□□□ -0.49
MECP2-216ENST00000627864 NDUFA12Q9UI09 145 aa12.01□□□□□ -0.49
MECP2-216ENST00000627864 DYNC1H1Q14204 4646 aaKnown RBP12.01□□□□□ -0.49
MECP2-216ENST00000627864 CDK2AP2O75956 126 aa12□□□□□ -0.49
MECP2-216ENST00000627864 XGP55808 180 aa12□□□□□ -0.49
MECP2-216ENST00000627864 GAGE2EQ4V326 116 aa12□□□□□ -0.49
MECP2-216ENST00000627864 Q6ZRP5 223 aa12□□□□□ -0.49
MECP2-216ENST00000627864 GAGE2DQ9UEU5 116 aa12□□□□□ -0.49
MECP2-216ENST00000627864 MYMXA0A1B0GTQ4 84 aa11.99□□□□□ -0.49
MECP2-216ENST00000627864 CIRBPQ14011 172 aaKnown RBP11.99□□□□□ -0.49
MECP2-216ENST00000627864 SPACA4Q8TDM5 124 aa11.99□□□□□ -0.49
MECP2-216ENST00000627864 LINC00474Q9P2X8 69 aa11.99□□□□□ -0.49
MECP2-216ENST00000627864 PFN2P35080 140 aa11.98□□□□□ -0.49
MECP2-216ENST00000627864 ERG28Q9UKR5 140 aa11.98□□□□□ -0.49
MECP2-216ENST00000627864 IGKV2D-26A0A0A0MRZ7 120 aa11.97□□□□□ -0.49
MECP2-216ENST00000627864 HERV-K104P63124 156 aa11.97□□□□□ -0.49
MECP2-216ENST00000627864 ANKRD39Q53RE8 183 aa11.97□□□□□ -0.49
MECP2-216ENST00000627864 SCXQ7RTU7 201 aa11.97□□□□□ -0.49
MECP2-216ENST00000627864 A0A087WYN8 130 aa11.96□□□□□ -0.49
MECP2-216ENST00000627864 NMUP48645 174 aa11.96□□□□□ -0.49
MECP2-216ENST00000627864 CIRBP-AS1Q8TBR5 109 aa11.96□□□□□ -0.49
MECP2-216ENST00000627864 MEIG1Q5JSS6 88 aa11.95□□□□□ -0.5
MECP2-216ENST00000627864 A0A0U1RRA0 63 aa11.94□□□□□ -0.5
MECP2-216ENST00000627864 LINC00158P58513 81 aa11.94□□□□□ -0.5
MECP2-216ENST00000627864 LRP1BQ9NZR2 4599 aa11.94□□□□□ -0.5
MECP2-216ENST00000627864 HSBP1L1C9JCN9 74 aa11.93□□□□□ -0.5
MECP2-216ENST00000627864 COX17Q14061 63 aa11.93□□□□□ -0.5
MECP2-216ENST00000627864 XAGE1AQ9HD64 81 aa11.93□□□□□ -0.5
MECP2-216ENST00000627864 BIRC6Q9NR09 4857 aa11.93□□□□□ -0.5
MECP2-216ENST00000627864 SMIM13P0DJ93 91 aa11.92□□□□□ -0.5
MECP2-216ENST00000627864 JOSD1Q15040 202 aaPredicted RBP11.92□□□□□ -0.5
MECP2-216ENST00000627864 C9orf129Q5T035 196 aaKnown RBP11.92□□□□□ -0.5
MECP2-216ENST00000627864 TTTY13Q9BZ97 58 aa11.92□□□□□ -0.5
MECP2-216ENST00000627864 PLAC8Q9NZF1 115 aa11.91□□□□□ -0.5
MECP2-216ENST00000627864 A0A1W2PNN7 141 aa11.9□□□□□ -0.5
MECP2-216ENST00000627864 ZNF815PA8K554 130 aa11.9□□□□□ -0.5
MECP2-216ENST00000627864 LINC00587B1AMM8 73 aa11.9□□□□□ -0.5
MECP2-216ENST00000627864 SMR3BP02814 79 aaPredicted RBP11.9□□□□□ -0.5
MECP2-216ENST00000627864 FAM168BA1KXE4 195 aa11.89□□□□□ -0.51
MECP2-216ENST00000627864 DNAH8Q96JB1 4490 aa11.88□□□□□ -0.51
MECP2-216ENST00000627864 A0A0J9YXY3 114 aa11.88□□□□□ -0.51
MECP2-216ENST00000627864 SND1-IT1Q9HBX3 110 aa11.88□□□□□ -0.51
MECP2-216ENST00000627864 FAM19A5Q7Z5A7 132 aaPredicted RBP11.87□□□□□ -0.51
MECP2-216ENST00000627864 PCP2Q8IVA1 136 aa11.86□□□□□ -0.51
MECP2-216ENST00000627864 MIR7-3HGQ8N6C7 128 aa11.86□□□□□ -0.51
MECP2-216ENST00000627864 PYY3Q5JQD4 70 aa11.85□□□□□ -0.51
MECP2-216ENST00000627864 SERTAD4-AS1Q5TG53 156 aa11.84□□□□□ -0.51
MECP2-216ENST00000627864 DAND5Q8N907 189 aa11.84□□□□□ -0.51
MECP2-216ENST00000627864 EPM2AB3EWF7 344 aa11.83□□□□□ -0.52
MECP2-216ENST00000627864 KRTAP7-1Q8IUC3 87 aa11.83□□□□□ -0.52
MECP2-216ENST00000627864 SCGB1D4Q6XE38 83 aa11.82□□□□□ -0.52
MECP2-216ENST00000627864 LINC00528Q8N1L1 170 aa11.82□□□□□ -0.52
MECP2-216ENST00000627864 VAMP8Q9BV40 100 aa11.82□□□□□ -0.52
MECP2-216ENST00000627864 PAM16Q9Y3D7 125 aa11.82□□□□□ -0.52
MECP2-216ENST00000627864 APOBP04114 4563 aaKnown RBP11.82□□□□□ -0.52
MECP2-216ENST00000627864 ADAMTSL4-AS1Q5T5F5 129 aa11.81□□□□□ -0.52
MECP2-216ENST00000627864 PHF5AQ7RTV0 110 aaKnown RBP11.81□□□□□ -0.52
MECP2-216ENST00000627864 PLA2G2DQ9UNK4 145 aa11.81□□□□□ -0.52
MECP2-216ENST00000627864 KIAA1109Q2LD37 5005 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms