RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 SCGB1D1O95968 90 aa5.57□□□□□ -1.52
SGMS1-211ENST00000626236 PRSS2P07478 247 aa5.57□□□□□ -1.52
SGMS1-211ENST00000626236 ATOH7Q8N100 152 aa5.57□□□□□ -1.52
SGMS1-211ENST00000626236 FUSP35637 526 aaKnown RBP eCLIP5.56□□□□□ -1.52
SGMS1-211ENST00000626236 AKR1D1P51857 326 aa5.56□□□□□ -1.52
SGMS1-211ENST00000626236 HERVK_113P61574 105 aa5.56□□□□□ -1.52
SGMS1-211ENST00000626236 COX7B2Q8TF08 81 aa5.56□□□□□ -1.52
SGMS1-211ENST00000626236 CAMK2N2Q96S95 79 aa5.56□□□□□ -1.52
SGMS1-211ENST00000626236 IGLV5-39A0A0G2JS06 123 aa5.55□□□□□ -1.52
SGMS1-211ENST00000626236 KRTAP10-2P60368 255 aa5.55□□□□□ -1.52
SGMS1-211ENST00000626236 KIAA0087Q14695 138 aa5.55□□□□□ -1.52
SGMS1-211ENST00000626236 C6orf226Q5I0X4 101 aa5.55□□□□□ -1.52
SGMS1-211ENST00000626236 Q8IZM0 81 aa5.55□□□□□ -1.52
SGMS1-211ENST00000626236 STPG4Q8N801 248 aa5.55□□□□□ -1.52
SGMS1-211ENST00000626236 NTN5Q8WTR8 489 aaPredicted RBP5.55□□□□□ -1.52
SGMS1-211ENST00000626236 DNAH5Q8TE73 4624 aa5.55□□□□□ -1.52
SGMS1-211ENST00000626236 IGLV5-52A0A0A0MRZ9 124 aa5.54□□□□□ -1.52
SGMS1-211ENST00000626236 A0A1B0GVY2 172 aa5.54□□□□□ -1.52
SGMS1-211ENST00000626236 NDUFA1O15239 70 aa5.54□□□□□ -1.52
SGMS1-211ENST00000626236 SLPIP03973 132 aa5.54□□□□□ -1.52
SGMS1-211ENST00000626236 CKS1BP61024 79 aa5.54□□□□□ -1.52
SGMS1-211ENST00000626236 SYCNQ0VAF6 134 aa5.54□□□□□ -1.52
SGMS1-211ENST00000626236 C2orf82Q6UX34 121 aa5.54□□□□□ -1.52
SGMS1-211ENST00000626236 C2orf48Q96LS8 159 aa5.54□□□□□ -1.52
SGMS1-211ENST00000626236 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.53□□□□□ -1.52
SGMS1-211ENST00000626236 F8WDY8 70 aa5.53□□□□□ -1.52
SGMS1-211ENST00000626236 LEPROTO15243 131 aa5.53□□□□□ -1.52
SGMS1-211ENST00000626236 CNBPP62633 177 aaKnown RBP5.53□□□□□ -1.52
SGMS1-211ENST00000626236 JOSD1Q15040 202 aaPredicted RBP5.53□□□□□ -1.52
SGMS1-211ENST00000626236 UNQ6190/PRO20217Q6UXQ8 127 aa5.53□□□□□ -1.52
SGMS1-211ENST00000626236 Q6ZRU5 148 aa5.53□□□□□ -1.52
SGMS1-211ENST00000626236 CARD19Q96LW7 228 aa5.53□□□□□ -1.52
SGMS1-211ENST00000626236 E9PLD3 99 aa5.52□□□□□ -1.53
SGMS1-211ENST00000626236 CXCL5P42830 114 aa5.52□□□□□ -1.53
SGMS1-211ENST00000626236 TSPEAR-AS2P59090 65 aa5.52□□□□□ -1.53
SGMS1-211ENST00000626236 MAJINQ3KP22 176 aa5.52□□□□□ -1.53
SGMS1-211ENST00000626236 LINC01620Q4KN68 170 aa5.52□□□□□ -1.53
SGMS1-211ENST00000626236 C10orf25Q5T742 122 aa5.52□□□□□ -1.53
SGMS1-211ENST00000626236 PLEKHB2Q96CS7 222 aa5.52□□□□□ -1.53
SGMS1-211ENST00000626236 EPPK1P58107 5090 aaKnown RBP5.52□□□□□ -1.53
SGMS1-211ENST00000626236 HSBP1L1C9JCN9 74 aa5.51□□□□□ -1.53
SGMS1-211ENST00000626236 J3QQQ9 107 aa5.51□□□□□ -1.53
SGMS1-211ENST00000626236 LGALS3P17931 250 aaKnown RBP5.51□□□□□ -1.53
SGMS1-211ENST00000626236 LCE3BQ5TA77 95 aa5.51□□□□□ -1.53
SGMS1-211ENST00000626236 C6orf48Q9UBA6 75 aa5.51□□□□□ -1.53
SGMS1-211ENST00000626236 PKHD1P08F94 4074 aa5.5□□□□□ -1.53
SGMS1-211ENST00000626236 IGKV2D-26A0A0A0MRZ7 120 aa5.5□□□□□ -1.53
SGMS1-211ENST00000626236 TRBV30A0A0K0K1B3 111 aa5.5□□□□□ -1.53
SGMS1-211ENST00000626236 GCSHP23434 173 aa5.5□□□□□ -1.53
SGMS1-211ENST00000626236 NMUP48645 174 aa5.5□□□□□ -1.53
SGMS1-211ENST00000626236 C9orf116Q5BN46 136 aaPredicted RBP5.5□□□□□ -1.53
SGMS1-211ENST00000626236 PYY3Q5JQD4 70 aa5.5□□□□□ -1.53
SGMS1-211ENST00000626236 C9orf163Q8N9P6 203 aa5.5□□□□□ -1.53
SGMS1-211ENST00000626236 ZNF625Q96I27 306 aaPredicted RBP5.5□□□□□ -1.53
SGMS1-211ENST00000626236 NDUFA12Q9UI09 145 aa5.5□□□□□ -1.53
SGMS1-211ENST00000626236 MYMXA0A1B0GTQ4 84 aa5.49□□□□□ -1.53
SGMS1-211ENST00000626236 LOC105371267A0A1B0GV96 52 aa5.49□□□□□ -1.53
SGMS1-211ENST00000626236 C16orf90A8MZG2 172 aa5.49□□□□□ -1.53
SGMS1-211ENST00000626236 RNF151Q2KHN1 245 aa5.49□□□□□ -1.53
SGMS1-211ENST00000626236 SFTA2Q6UW10 78 aa5.49□□□□□ -1.53
SGMS1-211ENST00000626236 KRTAP19-1Q8IUB9 90 aa5.49□□□□□ -1.53
SGMS1-211ENST00000626236 LOC107984640A0A0U1RRK4 108 aa5.48□□□□□ -1.53
SGMS1-211ENST00000626236 RPL18AQ02543 176 aaKnown RBP5.48□□□□□ -1.53
SGMS1-211ENST00000626236 VAMP8Q9BV40 100 aa5.48□□□□□ -1.53
SGMS1-211ENST00000626236 TTTY13Q9BZ97 58 aa5.48□□□□□ -1.53
SGMS1-211ENST00000626236 ERG28Q9UKR5 140 aa5.48□□□□□ -1.53
SGMS1-211ENST00000626236 PLA2G2DQ9UNK4 145 aa5.48□□□□□ -1.53
SGMS1-211ENST00000626236 PAM16Q9Y3D7 125 aa5.48□□□□□ -1.53
SGMS1-211ENST00000626236 DYNC1H1Q14204 4646 aaKnown RBP5.47□□□□□ -1.53
SGMS1-211ENST00000626236 ZNF815PA8K554 130 aa5.47□□□□□ -1.53
SGMS1-211ENST00000626236 PFN2P35080 140 aa5.47□□□□□ -1.53
SGMS1-211ENST00000626236 KRTAP10-1P60331 282 aa5.47□□□□□ -1.53
SGMS1-211ENST00000626236 HERV-K104P63124 156 aa5.47□□□□□ -1.53
SGMS1-211ENST00000626236 GAGE2BQ13066 116 aa5.47□□□□□ -1.53
SGMS1-211ENST00000626236 SPATA45Q537H7 98 aa5.47□□□□□ -1.53
SGMS1-211ENST00000626236 MEIG1Q5JSS6 88 aa5.47□□□□□ -1.53
SGMS1-211ENST00000626236 SDIM1Q6ZPB5 146 aa5.47□□□□□ -1.53
SGMS1-211ENST00000626236 PKIGQ9Y2B9 76 aa5.47□□□□□ -1.53
SGMS1-211ENST00000626236 DNAH8Q96JB1 4490 aa5.46□□□□□ -1.54
SGMS1-211ENST00000626236 A0A096LNI7 61 aa5.46□□□□□ -1.54
SGMS1-211ENST00000626236 IGKV2-24A0A0C4DH68 120 aa5.46□□□□□ -1.54
SGMS1-211ENST00000626236 A0A0U1RRA0 63 aa5.46□□□□□ -1.54
SGMS1-211ENST00000626236 NDUFC2-KCTD14E9PQ53 114 aa5.46□□□□□ -1.54
SGMS1-211ENST00000626236 GAGE2EQ4V326 116 aa5.46□□□□□ -1.54
SGMS1-211ENST00000626236 Q6ZRP5 223 aa5.46□□□□□ -1.54
SGMS1-211ENST00000626236 PCP2Q8IVA1 136 aa5.46□□□□□ -1.54
SGMS1-211ENST00000626236 GAGE2DQ9UEU5 116 aa5.46□□□□□ -1.54
SGMS1-211ENST00000626236 A0A0J9YXY3 114 aa5.45□□□□□ -1.54
SGMS1-211ENST00000626236 TLX1NBP0CAT3 122 aa5.45□□□□□ -1.54
SGMS1-211ENST00000626236 CHTF8P0CG12 524 aa5.45□□□□□ -1.54
SGMS1-211ENST00000626236 SMIM13P0DJ93 91 aa5.45□□□□□ -1.54
SGMS1-211ENST00000626236 PTTG1IPP53801 180 aa5.45□□□□□ -1.54
SGMS1-211ENST00000626236 LINC00158P58513 81 aa5.45□□□□□ -1.54
SGMS1-211ENST00000626236 COX17Q14061 63 aa5.45□□□□□ -1.54
SGMS1-211ENST00000626236 LRP1BQ9NZR2 4599 aa5.45□□□□□ -1.54
SGMS1-211ENST00000626236 LINC00587B1AMM8 73 aa5.44□□□□□ -1.54
SGMS1-211ENST00000626236 SMIM6P0DI80 62 aa5.44□□□□□ -1.54
SGMS1-211ENST00000626236 S100A12P80511 92 aa5.44□□□□□ -1.54
SGMS1-211ENST00000626236 SCGB1D4Q6XE38 83 aa5.44□□□□□ -1.54
SGMS1-211ENST00000626236 PANO1I0J062 215 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms