RNA–Protein interactions for RNA: ENST00000625402.1

SCARNA4-202, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 129 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-202ENST00000625402 USP9YO00507 2555 aaPredicted RBP-0.36□□□□□ -2.47
SCARNA4-202ENST00000625402 POLA1P09884 1462 aaPredicted RBP-0.36□□□□□ -2.47
SCARNA4-202ENST00000625402 RYR3Q15413 4870 aa-0.37□□□□□ -2.47
SCARNA4-202ENST00000625402 MYO18BQ8IUG5 2567 aa-0.37□□□□□ -2.47
SCARNA4-202ENST00000625402 M0R2T5 61 aa-0.37□□□□□ -2.47
SCARNA4-202ENST00000625402 SVBPQ8N300 66 aa-0.37□□□□□ -2.47
SCARNA4-202ENST00000625402 GNG8Q9UK08 70 aa-0.37□□□□□ -2.47
SCARNA4-202ENST00000625402 EPPK1P58107 5090 aaKnown RBP-0.37□□□□□ -2.47
SCARNA4-202ENST00000625402 TACC2O95359 2948 aa-0.37□□□□□ -2.47
SCARNA4-202ENST00000625402 DNAH6Q9C0G6 4158 aa-0.38□□□□□ -2.47
SCARNA4-202ENST00000625402 USH2AO75445 5202 aa-0.38□□□□□ -2.47
SCARNA4-202ENST00000625402 KIAA1109Q2LD37 5005 aa-0.38□□□□□ -2.47
SCARNA4-202ENST00000625402 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.38□□□□□ -2.47
SCARNA4-202ENST00000625402 ATP5EP56381 51 aaPredicted RBP-0.38□□□□□ -2.47
SCARNA4-202ENST00000625402 WHAMMP3Q1A5X7 153 aa-0.38□□□□□ -2.47
SCARNA4-202ENST00000625402 KLK9Q2XQG4 91 aa-0.38□□□□□ -2.47
SCARNA4-202ENST00000625402 LINC01600Q96MT4 127 aa-0.38□□□□□ -2.47
SCARNA4-202ENST00000625402 STARD9Q9P2P6 4700 aa-0.38□□□□□ -2.47
SCARNA4-202ENST00000625402 TULP4Q9NRJ4 1543 aa-0.38□□□□□ -2.47
SCARNA4-202ENST00000625402 ARHGEF12Q9NZN5 1544 aa-0.38□□□□□ -2.47
SCARNA4-202ENST00000625402 WDR7Q9Y4E6 1490 aa-0.39□□□□□ -2.47
SCARNA4-202ENST00000625402 DNAH3Q8TD57 4116 aa-0.39□□□□□ -2.47
SCARNA4-202ENST00000625402 FAM223BA6NKX1 122 aa-0.39□□□□□ -2.47
SCARNA4-202ENST00000625402 SPRR2EP22531 72 aa-0.39□□□□□ -2.47
SCARNA4-202ENST00000625402 SNCAP37840 140 aa-0.39□□□□□ -2.47
SCARNA4-202ENST00000625402 SARNPP82979 210 aaKnown RBP-0.39□□□□□ -2.47
SCARNA4-202ENST00000625402 RYR1P21817 5038 aa-0.39□□□□□ -2.47
SCARNA4-202ENST00000625402 PKHD1L1Q86WI1 4243 aa-0.39□□□□□ -2.47
SCARNA4-202ENST00000625402 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.39□□□□□ -2.47
SCARNA4-202ENST00000625402 ADGRL2O95490 1459 aa-0.4□□□□□ -2.47
SCARNA4-202ENST00000625402 AKAP9Q99996 3911 aa-0.4□□□□□ -2.47
SCARNA4-202ENST00000625402 TRBV7-4A0A0J9YYF1 115 aa-0.4□□□□□ -2.47
SCARNA4-202ENST00000625402 FDCSPQ8NFU4 85 aa-0.4□□□□□ -2.47
SCARNA4-202ENST00000625402 PRO1854Q9UHT4 67 aa-0.4□□□□□ -2.47
SCARNA4-202ENST00000625402 KNL1Q8NG31 2342 aa-0.4□□□□□ -2.47
SCARNA4-202ENST00000625402 BIRC6Q9NR09 4857 aa-0.4□□□□□ -2.47
SCARNA4-202ENST00000625402 PZPP20742 1482 aa-0.41□□□□□ -2.47
SCARNA4-202ENST00000625402 MAGI1Q96QZ7 1491 aaPredicted RBP-0.41□□□□□ -2.47
SCARNA4-202ENST00000625402 EHBP1L1Q8N3D4 1523 aa-0.41□□□□□ -2.48
SCARNA4-202ENST00000625402 A0A1B0GWA3 101 aa-0.41□□□□□ -2.48
SCARNA4-202ENST00000625402 TRAPPC2P0DI81 140 aa-0.41□□□□□ -2.48
SCARNA4-202ENST00000625402 TRAPPC2BP0DI82 140 aa-0.41□□□□□ -2.48
SCARNA4-202ENST00000625402 TMEM203Q969S6 136 aa-0.41□□□□□ -2.48
SCARNA4-202ENST00000625402 ACACAQ13085 2346 aa-0.41□□□□□ -2.48
SCARNA4-202ENST00000625402 NBASA2RRP1 2371 aa-0.41□□□□□ -2.48
SCARNA4-202ENST00000625402 GAPVD1Q14C86 1478 aa-0.41□□□□□ -2.48
SCARNA4-202ENST00000625402 IQSEC2Q5JU85 1478 aa-0.41□□□□□ -2.48
SCARNA4-202ENST00000625402 SONP18583 2426 aaKnown RBP-0.42□□□□□ -2.48
SCARNA4-202ENST00000625402 hADV29S1A0JD25 119 aa-0.42□□□□□ -2.48
SCARNA4-202ENST00000625402 NAP1L6A6NFF2 107 aa-0.42□□□□□ -2.48
SCARNA4-202ENST00000625402 COX6CP09669 75 aa-0.42□□□□□ -2.48
SCARNA4-202ENST00000625402 KRTAP6-2Q3LI66 62 aa-0.42□□□□□ -2.48
SCARNA4-202ENST00000625402 SPTBN4Q9H254 2564 aa-0.42□□□□□ -2.48
SCARNA4-202ENST00000625402 HECTD1Q9ULT8 2610 aa-0.42□□□□□ -2.48
SCARNA4-202ENST00000625402 AKAP13Q12802 2813 aa-0.42□□□□□ -2.48
SCARNA4-202ENST00000625402 SCN7AQ01118 1682 aa-0.43□□□□□ -2.48
SCARNA4-202ENST00000625402 CUBNO60494 3623 aa-0.43□□□□□ -2.48
SCARNA4-202ENST00000625402 H3BQ15 152 aa-0.43□□□□□ -2.48
SCARNA4-202ENST00000625402 COX8AP10176 69 aa-0.43□□□□□ -2.48
SCARNA4-202ENST00000625402 HSD52Q0P140 79 aa-0.43□□□□□ -2.48
SCARNA4-202ENST00000625402 DEFB135Q30KP9 77 aa-0.43□□□□□ -2.48
SCARNA4-202ENST00000625402 MUC17Q685J3 4493 aa-0.43□□□□□ -2.48
SCARNA4-202ENST00000625402 C1orf167Q5SNV9 1468 aa-0.43□□□□□ -2.48
SCARNA4-202ENST00000625402 TEP1Q99973 2627 aaKnown RBP-0.43□□□□□ -2.48
SCARNA4-202ENST00000625402 COL4A6Q14031 1691 aa-0.43□□□□□ -2.48
SCARNA4-202ENST00000625402 ARHGAP5Q13017 1502 aa-0.43□□□□□ -2.48
SCARNA4-202ENST00000625402 CRYM-AS1A6NIL9 109 aa-0.44□□□□□ -2.48
SCARNA4-202ENST00000625402 DEFB105AQ8NG35 78 aa-0.44□□□□□ -2.48
SCARNA4-202ENST00000625402 USMG5Q96IX5 58 aa-0.44□□□□□ -2.48
SCARNA4-202ENST00000625402 C12orf57Q99622 126 aa-0.44□□□□□ -2.48
SCARNA4-202ENST00000625402 FXYD6Q9H0Q3 95 aa-0.44□□□□□ -2.48
SCARNA4-202ENST00000625402 LINC00846Q9NV44 126 aa-0.44□□□□□ -2.48
SCARNA4-202ENST00000625402 MT1AP04731 61 aa-0.45□□□□□ -2.48
SCARNA4-202ENST00000625402 SAA2P0DJI9 122 aaPredicted RBP-0.45□□□□□ -2.48
SCARNA4-202ENST00000625402 SEC11AP67812 179 aa-0.45□□□□□ -2.48
SCARNA4-202ENST00000625402 MRPS10P82664 201 aaKnown RBP-0.45□□□□□ -2.48
SCARNA4-202ENST00000625402 GTF2H5Q6ZYL4 71 aa-0.45□□□□□ -2.48
SCARNA4-202ENST00000625402 PRO1933Q9H354 126 aa-0.45□□□□□ -2.48
SCARNA4-202ENST00000625402 CRIPTQ9P021 101 aa-0.45□□□□□ -2.48
SCARNA4-202ENST00000625402 USP9XQ93008 2570 aaPredicted RBP-0.45□□□□□ -2.48
SCARNA4-202ENST00000625402 SPHKAPQ2M3C7 1700 aa-0.45□□□□□ -2.48
SCARNA4-202ENST00000625402 RIF1Q5UIP0 2472 aaKnown RBP-0.45□□□□□ -2.48
SCARNA4-202ENST00000625402 NRKQ7Z2Y5 1582 aa-0.45□□□□□ -2.48
SCARNA4-202ENST00000625402 DNAH2Q9P225 4427 aa-0.46□□□□□ -2.48
SCARNA4-202ENST00000625402 LAMA1P25391 3075 aa-0.46□□□□□ -2.48
SCARNA4-202ENST00000625402 ABCC5O15440 1437 aa-0.46□□□□□ -2.48
SCARNA4-202ENST00000625402 LYSTQ99698 3801 aa-0.46□□□□□ -2.48
SCARNA4-202ENST00000625402 PRRC2CQ9Y520 2896 aaKnown RBP-0.46□□□□□ -2.48
SCARNA4-202ENST00000625402 VPS13DQ5THJ4 4388 aa-0.46□□□□□ -2.48
SCARNA4-202ENST00000625402 A0A087WVE0 104 aa-0.46□□□□□ -2.48
SCARNA4-202ENST00000625402 TMEM262E9PQX1 116 aa-0.46□□□□□ -2.48
SCARNA4-202ENST00000625402 H0YGG7 62 aa-0.46□□□□□ -2.48
SCARNA4-202ENST00000625402 SYS1-DBNDD2H3BUS1 97 aa-0.46□□□□□ -2.48
SCARNA4-202ENST00000625402 C9orf62Q8N4C0 152 aa-0.46□□□□□ -2.48
SCARNA4-202ENST00000625402 SPRR2FQ96RM1 72 aa-0.46□□□□□ -2.48
SCARNA4-202ENST00000625402 DNAH9Q9NYC9 4486 aa-0.46□□□□□ -2.48
SCARNA4-202ENST00000625402 PKD1P98161 4303 aa-0.47□□□□□ -2.48
SCARNA4-202ENST00000625402 ANKRD11Q6UB99 2663 aaPredicted RBP-0.47□□□□□ -2.48
SCARNA4-202ENST00000625402 MAPKBP1O60336 1514 aa-0.47□□□□□ -2.48
SCARNA4-202ENST00000625402 FAT3Q8TDW7 4589 aa-0.47□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 159.6 ms