RNA–Protein interactions for RNA: ENST00000622755.4

CBWD3-218, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,413 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-218ENST00000622755 ZC2HC1BQ5TFG8 222 aa7.77□□□□□ -1.17
CBWD3-218ENST00000622755 UNQ6190/PRO20217Q6UXQ8 127 aa7.77□□□□□ -1.17
CBWD3-218ENST00000622755 Q6ZRP5 223 aa7.77□□□□□ -1.17
CBWD3-218ENST00000622755 Q8IZM0 81 aa7.77□□□□□ -1.17
CBWD3-218ENST00000622755 LINC00469Q8N7U9 141 aa7.77□□□□□ -1.17
CBWD3-218ENST00000622755 VPS13BQ7Z7G8 4022 aa7.77□□□□□ -1.17
CBWD3-218ENST00000622755 H3BRM9 83 aa7.76□□□□□ -1.17
CBWD3-218ENST00000622755 TLX1NBP0CAT3 122 aa7.76□□□□□ -1.17
CBWD3-218ENST00000622755 KRTAP10-4P60372 401 aaPredicted RBP7.76□□□□□ -1.17
CBWD3-218ENST00000622755 FAT1Q14517 4588 aa7.76□□□□□ -1.17
CBWD3-218ENST00000622755 TINCRA0A1B0GVN0 87 aa7.75□□□□□ -1.17
CBWD3-218ENST00000622755 HBDP02042 147 aa7.75□□□□□ -1.17
CBWD3-218ENST00000622755 NDUFA6P56556 154 aa7.75□□□□□ -1.17
CBWD3-218ENST00000622755 C9orf116Q5BN46 136 aaPredicted RBP7.75□□□□□ -1.17
CBWD3-218ENST00000622755 C6orf48Q9UBA6 75 aa7.75□□□□□ -1.17
CBWD3-218ENST00000622755 CDKN2A-AS1Q9UH64 79 aa7.75□□□□□ -1.17
CBWD3-218ENST00000622755 NDUFC2-KCTD14E9PQ53 114 aa7.74□□□□□ -1.17
CBWD3-218ENST00000622755 ATP5LO75964 103 aa7.74□□□□□ -1.17
CBWD3-218ENST00000622755 PRR3P79522 188 aaKnown RBP7.74□□□□□ -1.17
CBWD3-218ENST00000622755 GAGE2EQ4V326 116 aa7.74□□□□□ -1.17
CBWD3-218ENST00000622755 C18orf32Q8TCD1 76 aa7.74□□□□□ -1.17
CBWD3-218ENST00000622755 GAGE2DQ9UEU5 116 aa7.74□□□□□ -1.17
CBWD3-218ENST00000622755 FLG2Q5D862 2391 aaPredicted RBP7.73□□□□□ -1.17
CBWD3-218ENST00000622755 KIAA0087Q14695 138 aa7.73□□□□□ -1.17
CBWD3-218ENST00000622755 PDZD11Q5EBL8 140 aa7.73□□□□□ -1.17
CBWD3-218ENST00000622755 C10orf25Q5T742 122 aa7.73□□□□□ -1.17
CBWD3-218ENST00000622755 C2orf82Q6UX34 121 aa7.73□□□□□ -1.17
CBWD3-218ENST00000622755 CST9LQ9H4G1 147 aa7.73□□□□□ -1.17
CBWD3-218ENST00000622755 F8VRH5 84 aa7.72□□□□□ -1.17
CBWD3-218ENST00000622755 REG3GQ6UW15 175 aa7.71□□□□□ -1.17
CBWD3-218ENST00000622755 A0A1W2PNN7 141 aa7.7□□□□□ -1.18
CBWD3-218ENST00000622755 H3BS24 57 aa7.7□□□□□ -1.18
CBWD3-218ENST00000622755 SPINK6Q6UWN8 80 aa7.7□□□□□ -1.18
CBWD3-218ENST00000622755 FAM19A5Q7Z5A7 132 aaPredicted RBP7.7□□□□□ -1.18
CBWD3-218ENST00000622755 COX7B2Q8TF08 81 aa7.7□□□□□ -1.18
CBWD3-218ENST00000622755 DMBT1Q9UGM3 2413 aaPredicted RBP7.7□□□□□ -1.18
CBWD3-218ENST00000622755 UBE2BP63146 152 aa7.69□□□□□ -1.18
CBWD3-218ENST00000622755 CHCHD1Q96BP2 118 aaKnown RBP7.69□□□□□ -1.18
CBWD3-218ENST00000622755 IGLV5-45A0A087WSX0 123 aa7.69□□□□□ -1.18
CBWD3-218ENST00000622755 SMIM1B2RUZ4 78 aa7.69□□□□□ -1.18
CBWD3-218ENST00000622755 HNRNPA3P51991 378 aaKnown RBP7.69□□□□□ -1.18
CBWD3-218ENST00000622755 SERTAD4-AS1Q5TG53 156 aa7.69□□□□□ -1.18
CBWD3-218ENST00000622755 BAGE3Q86Y29 109 aa7.69□□□□□ -1.18
CBWD3-218ENST00000622755 M0QXV9 152 aa7.68□□□□□ -1.18
CBWD3-218ENST00000622755 HSBP1O75506 76 aa7.68□□□□□ -1.18
CBWD3-218ENST00000622755 SPINK8P0C7L1 97 aa7.68□□□□□ -1.18
CBWD3-218ENST00000622755 PHF5AQ7RTV0 110 aaKnown RBP7.68□□□□□ -1.18
CBWD3-218ENST00000622755 IGLC3P0DOY3 106 aa7.67□□□□□ -1.18
CBWD3-218ENST00000622755 PMCHL1Q16048 86 aa7.67□□□□□ -1.18
CBWD3-218ENST00000622755 C1orf137Q5JT78 98 aa7.67□□□□□ -1.18
CBWD3-218ENST00000622755 SFTA2Q6UW10 78 aa7.67□□□□□ -1.18
CBWD3-218ENST00000622755 LBHQ53QV2 105 aaPredicted RBP7.66□□□□□ -1.18
CBWD3-218ENST00000622755 TMEM170BQ5T4T1 132 aa7.66□□□□□ -1.18
CBWD3-218ENST00000622755 CBLN2Q8IUK8 224 aa7.66□□□□□ -1.18
CBWD3-218ENST00000622755 PSORS1C2Q9UIG4 136 aa7.66□□□□□ -1.18
CBWD3-218ENST00000622755 FAM168BA1KXE4 195 aa7.65□□□□□ -1.18
CBWD3-218ENST00000622755 CHTOPQ9Y3Y2 248 aaKnown RBP7.65□□□□□ -1.18
CBWD3-218ENST00000622755 A0A096LNJ9 63 aa7.64□□□□□ -1.19
CBWD3-218ENST00000622755 IFI27L1Q96BM0 104 aa7.64□□□□□ -1.19
CBWD3-218ENST00000622755 URB1-AS1Q96HZ7 61 aa7.64□□□□□ -1.19
CBWD3-218ENST00000622755 YPEL4Q96NS1 127 aa7.64□□□□□ -1.19
CBWD3-218ENST00000622755 SLC7A5P1Q8MH63 180 aa7.63□□□□□ -1.19
CBWD3-218ENST00000622755 XAGE1AQ9HD64 81 aa7.63□□□□□ -1.19
CBWD3-218ENST00000622755 TRGC2P03986 189 aa7.62□□□□□ -1.19
CBWD3-218ENST00000622755 ZNF22P17026 224 aaPredicted RBP7.62□□□□□ -1.19
CBWD3-218ENST00000622755 C9orf129Q5T035 196 aaKnown RBP7.62□□□□□ -1.19
CBWD3-218ENST00000622755 DIRC1Q969H9 104 aa7.62□□□□□ -1.19
CBWD3-218ENST00000622755 MYCBP2O75592 4640 aa7.61□□□□□ -1.19
CBWD3-218ENST00000622755 TRAV12-1A0A0B4J245 112 aa7.61□□□□□ -1.19
CBWD3-218ENST00000622755 NKAPP1Q8N9T2 125 aa7.61□□□□□ -1.19
CBWD3-218ENST00000622755 IGLV7-43P04211 117 aa7.61□□□□□ -1.19
CBWD3-218ENST00000622755 LINC01600Q96MT4 127 aa7.61□□□□□ -1.19
CBWD3-218ENST00000622755 IGLV5-39A0A0G2JS06 123 aa7.6□□□□□ -1.19
CBWD3-218ENST00000622755 C11orf86A6NJI1 115 aa7.6□□□□□ -1.19
CBWD3-218ENST00000622755 NUPR1O60356 82 aa7.6□□□□□ -1.19
CBWD3-218ENST00000622755 LEPROTL1O95214 131 aa7.6□□□□□ -1.19
CBWD3-218ENST00000622755 PFN2P35080 140 aa7.6□□□□□ -1.19
CBWD3-218ENST00000622755 SRSF9Q13242 221 aaKnown RBP eCLIP7.6□□□□□ -1.19
CBWD3-218ENST00000622755 COX17Q14061 63 aa7.6□□□□□ -1.19
CBWD3-218ENST00000622755 MRPL55Q7Z7F7 128 aaKnown RBP7.6□□□□□ -1.19
CBWD3-218ENST00000622755 TP73-AS1Q9UF72 201 aa7.6□□□□□ -1.19
CBWD3-218ENST00000622755 HSPB8Q9UJY1 196 aa7.6□□□□□ -1.19
CBWD3-218ENST00000622755 C22orf24Q9Y442 160 aa7.6□□□□□ -1.19
CBWD3-218ENST00000622755 ATP6V1G1O75348 118 aa7.59□□□□□ -1.19
CBWD3-218ENST00000622755 H0Y8G0 127 aa7.58□□□□□ -1.2
CBWD3-218ENST00000622755 RPL24P83731 157 aaKnown RBP7.58□□□□□ -1.2
CBWD3-218ENST00000622755 ERG28Q9UKR5 140 aa7.58□□□□□ -1.2
CBWD3-218ENST00000622755 PLA2G2DQ9UNK4 145 aa7.58□□□□□ -1.2
CBWD3-218ENST00000622755 FAM19A2Q8N3H0 131 aa7.57□□□□□ -1.2
CBWD3-218ENST00000622755 LINC00587B1AMM8 73 aa7.56□□□□□ -1.2
CBWD3-218ENST00000622755 SERF1AO75920 110 aa7.56□□□□□ -1.2
CBWD3-218ENST00000622755 PKHD1L1Q86WI1 4243 aa7.55□□□□□ -1.2
CBWD3-218ENST00000622755 H0Y9J4 135 aa7.55□□□□□ -1.2
CBWD3-218ENST00000622755 PLNP26678 52 aa7.55□□□□□ -1.2
CBWD3-218ENST00000622755 HERVK_113P61574 105 aa7.55□□□□□ -1.2
CBWD3-218ENST00000622755 ZNF625Q96I27 306 aaPredicted RBP7.55□□□□□ -1.2
CBWD3-218ENST00000622755 TMEM223A0PJW6 202 aa7.54□□□□□ -1.2
CBWD3-218ENST00000622755 MT1HL1P0DM35 61 aa7.54□□□□□ -1.2
CBWD3-218ENST00000622755 RPL28P46779 137 aaKnown RBP7.54□□□□□ -1.2
CBWD3-218ENST00000622755 LINC00158P58513 81 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms