RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 RNASE1P07998 156 aaKnown RBP5.66□□□□□ -1.5
VPS11-209ENST00000622309 Q6ZRU5 148 aa5.66□□□□□ -1.5
VPS11-209ENST00000622309 COX6A2Q02221 97 aa5.65□□□□□ -1.5
VPS11-209ENST00000622309 CRYBG3Q68DQ2 2970 aa5.65□□□□□ -1.51
VPS11-209ENST00000622309 C2CD3Q4AC94 2353 aa5.65□□□□□ -1.51
VPS11-209ENST00000622309 IGLV5-45A0A087WSX0 123 aa5.65□□□□□ -1.51
VPS11-209ENST00000622309 C1orf158Q8N1D5 194 aa5.65□□□□□ -1.51
VPS11-209ENST00000622309 CSPG4Q6UVK1 2322 aa5.64□□□□□ -1.51
VPS11-209ENST00000622309 C11orf72Q8NBR9 251 aa5.64□□□□□ -1.51
VPS11-209ENST00000622309 LINC00467Q9BRT7 94 aa5.64□□□□□ -1.51
VPS11-209ENST00000622309 ABCA12Q86UK0 2595 aa5.64□□□□□ -1.51
VPS11-209ENST00000622309 ATP6V0E1O15342 81 aa5.64□□□□□ -1.51
VPS11-209ENST00000622309 DYNLRB2Q8TF09 96 aa5.64□□□□□ -1.51
VPS11-209ENST00000622309 CHCHD7Q9BUK0 85 aa5.64□□□□□ -1.51
VPS11-209ENST00000622309 IGKV2-28A0A075B6P5 120 aa5.63□□□□□ -1.51
VPS11-209ENST00000622309 IBA57-AS1B1ANH7 110 aa5.63□□□□□ -1.51
VPS11-209ENST00000622309 SMIM1B2RUZ4 78 aa5.63□□□□□ -1.51
VPS11-209ENST00000622309 G3V318 75 aa5.63□□□□□ -1.51
VPS11-209ENST00000622309 IGKV2D-28P01615 120 aa5.63□□□□□ -1.51
VPS11-209ENST00000622309 LINC00158P58513 81 aa5.63□□□□□ -1.51
VPS11-209ENST00000622309 CSMD2Q7Z408 3487 aa5.63□□□□□ -1.51
VPS11-209ENST00000622309 TMEM256-PLSCR3K7ERE1 68 aa5.63□□□□□ -1.51
VPS11-209ENST00000622309 IGKV3-20P01619 116 aa5.63□□□□□ -1.51
VPS11-209ENST00000622309 FBN2P35556 2912 aa5.63□□□□□ -1.51
VPS11-209ENST00000622309 FUSP35637 526 aaKnown RBP eCLIP5.63□□□□□ -1.51
VPS11-209ENST00000622309 MINOS1Q5TGZ0 78 aa5.63□□□□□ -1.51
VPS11-209ENST00000622309 TM2D3Q9BRN9 247 aa5.63□□□□□ -1.51
VPS11-209ENST00000622309 ITPR2Q14571 2701 aa5.62□□□□□ -1.51
VPS11-209ENST00000622309 IGHV3-38A0A0C4DH36 116 aa5.62□□□□□ -1.51
VPS11-209ENST00000622309 LINC01547P58512 204 aaPredicted RBP5.62□□□□□ -1.51
VPS11-209ENST00000622309 LINC00242Q5T6M2 205 aa5.62□□□□□ -1.51
VPS11-209ENST00000622309 Q6ZTI0 123 aa5.62□□□□□ -1.51
VPS11-209ENST00000622309 TMEM254Q8TBM7 123 aa5.62□□□□□ -1.51
VPS11-209ENST00000622309 PROK1P58294 105 aa5.62□□□□□ -1.51
VPS11-209ENST00000622309 UTP20O75691 2785 aaKnown RBP5.62□□□□□ -1.51
VPS11-209ENST00000622309 CENPEQ02224 2701 aa5.62□□□□□ -1.51
VPS11-209ENST00000622309 Q8N3U1 123 aa5.61□□□□□ -1.51
VPS11-209ENST00000622309 Q8N9W7 124 aa5.61□□□□□ -1.51
VPS11-209ENST00000622309 SPTSSBQ8NFR3 76 aa5.61□□□□□ -1.51
VPS11-209ENST00000622309 HTN1P15515 57 aa5.61□□□□□ -1.51
VPS11-209ENST00000622309 A8MU10 97 aa5.61□□□□□ -1.51
VPS11-209ENST00000622309 NREPQ16612 68 aa5.61□□□□□ -1.51
VPS11-209ENST00000622309 IGHV3OR16-12A0A075B7B8 117 aa5.6□□□□□ -1.51
VPS11-209ENST00000622309 TRBV7-4A0A0J9YYF1 115 aa5.6□□□□□ -1.51
VPS11-209ENST00000622309 C19orf54Q5BKX5 351 aa5.6□□□□□ -1.51
VPS11-209ENST00000622309 Q8N6K4 173 aa5.6□□□□□ -1.51
VPS11-209ENST00000622309 TOMM7Q9P0U1 55 aa5.6□□□□□ -1.51
VPS11-209ENST00000622309 NBPF19A0A087WUL8 3843 aa5.6□□□□□ -1.51
VPS11-209ENST00000622309 LRCOL1A6NCL2 159 aa5.59□□□□□ -1.51
VPS11-209ENST00000622309 RHPN1-AS1Q9BWJ2 59 aa5.59□□□□□ -1.51
VPS11-209ENST00000622309 CELSR2Q9HCU4 2923 aa5.59□□□□□ -1.51
VPS11-209ENST00000622309 A0A1W2PPR1 153 aa5.59□□□□□ -1.51
VPS11-209ENST00000622309 NDUFA4O00483 81 aa5.59□□□□□ -1.51
VPS11-209ENST00000622309 CCL18P55774 89 aa5.59□□□□□ -1.51
VPS11-209ENST00000622309 Q6ZVQ6 151 aa5.59□□□□□ -1.51
VPS11-209ENST00000622309 ODF3BA8MYP8 253 aa5.58□□□□□ -1.52
VPS11-209ENST00000622309 PRYO14603 147 aa5.58□□□□□ -1.52
VPS11-209ENST00000622309 SPINK13Q1W4C9 94 aa5.58□□□□□ -1.52
VPS11-209ENST00000622309 Q8N814 137 aa5.58□□□□□ -1.52
VPS11-209ENST00000622309 TRBV10-1A0A0K0K1A3 114 aa5.57□□□□□ -1.52
VPS11-209ENST00000622309 CXCL6P80162 114 aa5.57□□□□□ -1.52
VPS11-209ENST00000622309 POLQO75417 2590 aa5.57□□□□□ -1.52
VPS11-209ENST00000622309 ZNF706Q9Y5V0 76 aaPredicted RBP5.57□□□□□ -1.52
VPS11-209ENST00000622309 BPY2O14599 106 aa5.56□□□□□ -1.52
VPS11-209ENST00000622309 KLK9Q2XQG4 91 aa5.56□□□□□ -1.52
VPS11-209ENST00000622309 COX7B2Q8TF08 81 aa5.56□□□□□ -1.52
VPS11-209ENST00000622309 PSPHP1O15172 72 aa5.56□□□□□ -1.52
VPS11-209ENST00000622309 ZNF73O43830 326 aaPredicted RBP5.56□□□□□ -1.52
VPS11-209ENST00000622309 ERC2-IT1O76042 136 aa5.56□□□□□ -1.52
VPS11-209ENST00000622309 SCXQ7RTU7 201 aa5.56□□□□□ -1.52
VPS11-209ENST00000622309 IGHV3-11P01762 117 aa5.56□□□□□ -1.52
VPS11-209ENST00000622309 Q6ZQT0 140 aa5.56□□□□□ -1.52
VPS11-209ENST00000622309 KTN1-AS1Q86SY8 53 aa5.56□□□□□ -1.52
VPS11-209ENST00000622309 MINOS1-NBL1R4GNA1 71 aa5.56□□□□□ -1.52
VPS11-209ENST00000622309 F8P00451 2351 aa5.56□□□□□ -1.52
VPS11-209ENST00000622309 M0R378 163 aa5.55□□□□□ -1.52
VPS11-209ENST00000622309 LINC00167Q96N53 147 aa5.55□□□□□ -1.52
VPS11-209ENST00000622309 OTOGQ6ZRI0 2925 aa5.55□□□□□ -1.52
VPS11-209ENST00000622309 TRBV6-4A0A1B0GX49 114 aa5.55□□□□□ -1.52
VPS11-209ENST00000622309 C19orf84I3L1E1 186 aa5.55□□□□□ -1.52
VPS11-209ENST00000622309 A8MUN3 132 aa5.55□□□□□ -1.52
VPS11-209ENST00000622309 Q6ZSN1 163 aa5.55□□□□□ -1.52
VPS11-209ENST00000622309 K7EQG2 157 aa5.54□□□□□ -1.52
VPS11-209ENST00000622309 ZFP36P26651 326 aaKnown RBP5.54□□□□□ -1.52
VPS11-209ENST00000622309 Q1T7F1 81 aa5.54□□□□□ -1.52
VPS11-209ENST00000622309 FBXL19-AS1Q494R0 122 aa5.54□□□□□ -1.52
VPS11-209ENST00000622309 Q6ZTC4 211 aa5.54□□□□□ -1.52
VPS11-209ENST00000622309 LY6EQ16553 131 aa5.54□□□□□ -1.52
VPS11-209ENST00000622309 NTM-AS1Q6ZSK4 140 aa5.54□□□□□ -1.52
VPS11-209ENST00000622309 SETD2Q9BYW2 2564 aaPredicted RBP5.54□□□□□ -1.52
VPS11-209ENST00000622309 ESM1Q9NQ30 184 aa5.53□□□□□ -1.52
VPS11-209ENST00000622309 LOC110117498A0A087WWA1 95 aa5.53□□□□□ -1.52
VPS11-209ENST00000622309 BRD3OSQ6XYD6 125 aa5.53□□□□□ -1.52
VPS11-209ENST00000622309 TLN2Q9Y4G6 2542 aa5.53□□□□□ -1.52
VPS11-209ENST00000622309 hDV103S1A0JD37 113 aa5.52□□□□□ -1.53
VPS11-209ENST00000622309 C11orf71Q6IPW1 123 aa5.52□□□□□ -1.53
VPS11-209ENST00000622309 Q6ZRP5 223 aa5.52□□□□□ -1.53
VPS11-209ENST00000622309 PLA2G2DQ9UNK4 145 aa5.52□□□□□ -1.53
VPS11-209ENST00000622309 M0R2N4 97 aa5.52□□□□□ -1.53
VPS11-209ENST00000622309 LY6G6DO95868 133 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms