RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 PYGO1Q9Y3Y4 419 aa1.16□□□□□ -2.22
CPNE3-211ENST00000621526 V9GYH0 126 aa1.16□□□□□ -2.22
CPNE3-211ENST00000621526 TRBV24-1A0A075B6N3 115 aa1.15□□□□□ -2.23
CPNE3-211ENST00000621526 IGLV9-49A0A0B4J1Y8 123 aa1.15□□□□□ -2.23
CPNE3-211ENST00000621526 IFITM10A6NMD0 228 aa1.15□□□□□ -2.23
CPNE3-211ENST00000621526 VPREB1P12018 145 aa1.15□□□□□ -2.23
CPNE3-211ENST00000621526 RAB4AP20338 218 aa1.15□□□□□ -2.23
CPNE3-211ENST00000621526 SPRR2EP22531 72 aa1.15□□□□□ -2.23
CPNE3-211ENST00000621526 S100A5P33763 92 aa1.15□□□□□ -2.23
CPNE3-211ENST00000621526 SPRR1AP35321 89 aa1.15□□□□□ -2.23
CPNE3-211ENST00000621526 SPRR2BP35325 72 aa1.15□□□□□ -2.23
CPNE3-211ENST00000621526 SPRR2AP35326 72 aa1.15□□□□□ -2.23
CPNE3-211ENST00000621526 SUMO2P61956 95 aaKnown RBP1.15□□□□□ -2.23
CPNE3-211ENST00000621526 SEC11AP67812 179 aa1.15□□□□□ -2.23
CPNE3-211ENST00000621526 ZNF726P1Q15940 193 aa1.15□□□□□ -2.23
CPNE3-211ENST00000621526 KIAA1644Q3SXP7 199 aa1.15□□□□□ -2.23
CPNE3-211ENST00000621526 Q6ZUT4 128 aa1.15□□□□□ -2.23
CPNE3-211ENST00000621526 PPP1R1CQ8WVI7 109 aa1.15□□□□□ -2.23
CPNE3-211ENST00000621526 C20orf78Q9BR46 151 aa1.15□□□□□ -2.23
CPNE3-211ENST00000621526 SMIM3Q9BZL3 60 aa1.15□□□□□ -2.23
CPNE3-211ENST00000621526 TMEM191AQ9H0A3 160 aa1.15□□□□□ -2.23
CPNE3-211ENST00000621526 NUDT15Q9NV35 164 aa1.15□□□□□ -2.23
CPNE3-211ENST00000621526 TRAV9-1A0A075B6T8 112 aa1.14□□□□□ -2.23
CPNE3-211ENST00000621526 FXYD6-FXYD2A0A087WZ82 144 aa1.14□□□□□ -2.23
CPNE3-211ENST00000621526 LINC00862A6NCI5 91 aa1.14□□□□□ -2.23
CPNE3-211ENST00000621526 A8MWP4 228 aa1.14□□□□□ -2.23
CPNE3-211ENST00000621526 PLA2G10O15496 165 aa1.14□□□□□ -2.23
CPNE3-211ENST00000621526 PAGE4O60829 102 aa1.14□□□□□ -2.23
CPNE3-211ENST00000621526 H2AFB2P0C5Z0 115 aa1.14□□□□□ -2.23
CPNE3-211ENST00000621526 RPL35P42766 123 aaKnown RBP1.14□□□□□ -2.23
CPNE3-211ENST00000621526 CCL20P78556 96 aa1.14□□□□□ -2.23
CPNE3-211ENST00000621526 COX17Q14061 63 aa1.14□□□□□ -2.23
CPNE3-211ENST00000621526 LCE1AQ5T7P2 110 aa1.14□□□□□ -2.23
CPNE3-211ENST00000621526 C1orf195Q5TG92 126 aa1.14□□□□□ -2.23
CPNE3-211ENST00000621526 TRIQKQ629K1 86 aa1.14□□□□□ -2.23
CPNE3-211ENST00000621526 C2orf66Q6UXQ4 117 aa1.14□□□□□ -2.23
CPNE3-211ENST00000621526 AKAP14Q86UN6 197 aa1.14□□□□□ -2.23
CPNE3-211ENST00000621526 NUDT10Q8NFP7 164 aa1.14□□□□□ -2.23
CPNE3-211ENST00000621526 MPLKIPQ8TAP9 179 aa1.14□□□□□ -2.23
CPNE3-211ENST00000621526 MBD3L1Q8WWY6 194 aa1.14□□□□□ -2.23
CPNE3-211ENST00000621526 NUDT11Q96G61 164 aa1.14□□□□□ -2.23
CPNE3-211ENST00000621526 KCNQ1DNQ9H478 68 aa1.14□□□□□ -2.23
CPNE3-211ENST00000621526 TOMM7Q9P0U1 55 aa1.14□□□□□ -2.23
CPNE3-211ENST00000621526 TRBV20OR9-2A0A075B6H5 130 aa1.13□□□□□ -2.23
CPNE3-211ENST00000621526 LOC107984156A0A0G2JMH3 177 aa1.13□□□□□ -2.23
CPNE3-211ENST00000621526 A0A0G2JQZ4 141 aa1.13□□□□□ -2.23
CPNE3-211ENST00000621526 MAP1LC3B2A6NCE7 125 aa1.13□□□□□ -2.23
CPNE3-211ENST00000621526 A8MWL6 223 aa1.13□□□□□ -2.23
CPNE3-211ENST00000621526 PRYO14603 147 aa1.13□□□□□ -2.23
CPNE3-211ENST00000621526 LYRM1O43325 122 aa1.13□□□□□ -2.23
CPNE3-211ENST00000621526 PFDN1O60925 122 aa1.13□□□□□ -2.23
CPNE3-211ENST00000621526 NOL3O60936 208 aaKnown RBP1.13□□□□□ -2.23
CPNE3-211ENST00000621526 SCO1O75880 301 aa1.13□□□□□ -2.23
CPNE3-211ENST00000621526 IFI27P40305 119 aaPredicted RBP1.13□□□□□ -2.23
CPNE3-211ENST00000621526 H2BFSP57053 126 aa1.13□□□□□ -2.23
CPNE3-211ENST00000621526 RAB5BP61020 215 aa1.13□□□□□ -2.23
CPNE3-211ENST00000621526 RPL39P62891 51 aaKnown RBP1.13□□□□□ -2.23
CPNE3-211ENST00000621526 HERVK_113P63121 156 aa1.13□□□□□ -2.23
CPNE3-211ENST00000621526 PDZD11Q5EBL8 140 aa1.13□□□□□ -2.23
CPNE3-211ENST00000621526 AKR1C8PQ5T2L2 129 aa1.13□□□□□ -2.23
CPNE3-211ENST00000621526 SLC25A34Q6PIV7 304 aa1.13□□□□□ -2.23
CPNE3-211ENST00000621526 ALKAL2Q6UX46 152 aa1.13□□□□□ -2.23
CPNE3-211ENST00000621526 TEX43Q6ZNM6 134 aa1.13□□□□□ -2.23
CPNE3-211ENST00000621526 Q6ZVH6 145 aa1.13□□□□□ -2.23
CPNE3-211ENST00000621526 ARL17AQ8IVW1 177 aa1.13□□□□□ -2.23
CPNE3-211ENST00000621526 C11orf52Q96A22 123 aa1.13□□□□□ -2.23
CPNE3-211ENST00000621526 TMEM141Q96I45 108 aa1.13□□□□□ -2.23
CPNE3-211ENST00000621526 AMELXQ99217 191 aa1.13□□□□□ -2.23
CPNE3-211ENST00000621526 TIMM17AQ99595 171 aa1.13□□□□□ -2.23
CPNE3-211ENST00000621526 MAP1LC3BQ9GZQ8 125 aa1.13□□□□□ -2.23
CPNE3-211ENST00000621526 EIF5A2Q9GZV4 153 aaKnown RBP1.13□□□□□ -2.23
CPNE3-211ENST00000621526 VCX2Q9H322 139 aa1.13□□□□□ -2.23
CPNE3-211ENST00000621526 NDUFA13Q9P0J0 144 aa1.13□□□□□ -2.23
CPNE3-211ENST00000621526 RBM12B-AS1Q9P1G2 102 aa1.13□□□□□ -2.23
CPNE3-211ENST00000621526 CHTOPQ9Y3Y2 248 aaKnown RBP1.13□□□□□ -2.23
CPNE3-211ENST00000621526 IGLV4-3A0A075B6K6 122 aa1.12□□□□□ -2.23
CPNE3-211ENST00000621526 BORCS7-ASMTA0A0B4J1R7 106 aa1.12□□□□□ -2.23
CPNE3-211ENST00000621526 A0A1B0GUT8 65 aa1.12□□□□□ -2.23
CPNE3-211ENST00000621526 ETDCA0A1B0GVM5 59 aa1.12□□□□□ -2.23
CPNE3-211ENST00000621526 SCO2A0A1W2PP80 73 aa1.12□□□□□ -2.23
CPNE3-211ENST00000621526 B5MCH6 92 aa1.12□□□□□ -2.23
CPNE3-211ENST00000621526 ATP5LO75964 103 aa1.12□□□□□ -2.23
CPNE3-211ENST00000621526 ERC2-IT1O76042 136 aa1.12□□□□□ -2.23
CPNE3-211ENST00000621526 IL7P13232 177 aa1.12□□□□□ -2.23
CPNE3-211ENST00000621526 SPRR1BP22528 89 aa1.12□□□□□ -2.23
CPNE3-211ENST00000621526 SPRR2DP22532 72 aa1.12□□□□□ -2.23
CPNE3-211ENST00000621526 GNG4P50150 75 aa1.12□□□□□ -2.23
CPNE3-211ENST00000621526 KRTAP10-5P60370 271 aa1.12□□□□□ -2.23
CPNE3-211ENST00000621526 RAB14P61106 215 aa1.12□□□□□ -2.23
CPNE3-211ENST00000621526 S100A12P80511 92 aa1.12□□□□□ -2.23
CPNE3-211ENST00000621526 PAPPA-AS1Q5QFB9 102 aa1.12□□□□□ -2.23
CPNE3-211ENST00000621526 LCE3BQ5TA77 95 aa1.12□□□□□ -2.23
CPNE3-211ENST00000621526 LINC00299Q6ZSB3 139 aa1.12□□□□□ -2.23
CPNE3-211ENST00000621526 SMIM29Q86T20 159 aa1.12□□□□□ -2.23
CPNE3-211ENST00000621526 MTURNQ8N3F0 131 aa1.12□□□□□ -2.23
CPNE3-211ENST00000621526 SFT2D1Q8WV19 159 aa1.12□□□□□ -2.23
CPNE3-211ENST00000621526 SPRR2FQ96RM1 72 aa1.12□□□□□ -2.23
CPNE3-211ENST00000621526 C2orf88Q9BSF0 95 aa1.12□□□□□ -2.23
CPNE3-211ENST00000621526 SND1-IT1Q9HBX3 110 aa1.12□□□□□ -2.23
CPNE3-211ENST00000621526 CDKN2A-AS1Q9UH64 79 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms