RNA–Protein interactions for RNA: ENST00000620694.1

THSD4-207, Transcript of thrombospondin type 1 domain containing 4, humanhuman

TSL 3

Gene THSD4, Length 416 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD4-207ENST00000620694 Q8IZM0 81 aa15.4■□□□□ 0.06
THSD4-207ENST00000620694 RPL37AP61513 92 aaKnown RBP15.39■□□□□ 0.05
THSD4-207ENST00000620694 TRBV30A0A0K0K1B3 111 aa15.37■□□□□ 0.05
THSD4-207ENST00000620694 SMIM1B2RUZ4 78 aa15.37■□□□□ 0.05
THSD4-207ENST00000620694 IGLC3P0DOY3 106 aa15.37■□□□□ 0.05
THSD4-207ENST00000620694 H3BRM9 83 aa15.36■□□□□ 0.05
THSD4-207ENST00000620694 SPINK8P0C7L1 97 aa15.35■□□□□ 0.05
THSD4-207ENST00000620694 TLX1NBP0CAT3 122 aa15.35■□□□□ 0.05
THSD4-207ENST00000620694 FAM19A2Q8N3H0 131 aa15.35■□□□□ 0.05
THSD4-207ENST00000620694 C7orf33Q8WU49 177 aa15.35■□□□□ 0.05
THSD4-207ENST00000620694 IFI27L1Q96BM0 104 aa15.34■□□□□ 0.05
THSD4-207ENST00000620694 VPS13BQ7Z7G8 4022 aa15.33■□□□□ 0.04
THSD4-207ENST00000620694 SERF1AO75920 110 aa15.33■□□□□ 0.04
THSD4-207ENST00000620694 KRTAP10-4P60372 401 aaPredicted RBP15.33■□□□□ 0.04
THSD4-207ENST00000620694 CXCL5P42830 114 aa15.32■□□□□ 0.04
THSD4-207ENST00000620694 Q6ZRP5 223 aa15.32■□□□□ 0.04
THSD4-207ENST00000620694 COX7B2Q8TF08 81 aa15.32■□□□□ 0.04
THSD4-207ENST00000620694 CHTOPQ9Y3Y2 248 aaKnown RBP15.31■□□□□ 0.04
THSD4-207ENST00000620694 F8VRH5 84 aa15.3■□□□□ 0.04
THSD4-207ENST00000620694 ZNF22P17026 224 aaPredicted RBP15.3■□□□□ 0.04
THSD4-207ENST00000620694 LINC00310P59036 64 aa15.3■□□□□ 0.04
THSD4-207ENST00000620694 GAGE2EQ4V326 116 aa15.3■□□□□ 0.04
THSD4-207ENST00000620694 C9orf116Q5BN46 136 aaPredicted RBP15.3■□□□□ 0.04
THSD4-207ENST00000620694 GAGE2DQ9UEU5 116 aa15.3■□□□□ 0.04
THSD4-207ENST00000620694 A0A1W2PNN7 141 aa15.29■□□□□ 0.04
THSD4-207ENST00000620694 NDUFC2-KCTD14E9PQ53 114 aa15.29■□□□□ 0.04
THSD4-207ENST00000620694 TRAV12-1A0A0B4J245 112 aa15.28■□□□□ 0.04
THSD4-207ENST00000620694 C11orf86A6NJI1 115 aa15.28■□□□□ 0.04
THSD4-207ENST00000620694 LEPROTL1O95214 131 aa15.27■□□□□ 0.04
THSD4-207ENST00000620694 TMEM170BQ5T4T1 132 aa15.27■□□□□ 0.04
THSD4-207ENST00000620694 NUPR1O60356 82 aa15.25■□□□□ 0.03
THSD4-207ENST00000620694 SRRM2Q9UQ35 2752 aaKnown RBP15.23■□□□□ 0.03
THSD4-207ENST00000620694 IGLV5-39A0A0G2JS06 123 aa15.23■□□□□ 0.03
THSD4-207ENST00000620694 HSPB8Q9UJY1 196 aa15.23■□□□□ 0.03
THSD4-207ENST00000620694 HIST1H2BKO60814 126 aa15.22■□□□□ 0.03
THSD4-207ENST00000620694 HIST1H2BJP06899 126 aa15.22■□□□□ 0.03
THSD4-207ENST00000620694 HIST1H2BOP23527 126 aa15.22■□□□□ 0.03
THSD4-207ENST00000620694 HIST1H2BBP33778 126 aa15.22■□□□□ 0.03
THSD4-207ENST00000620694 HIST1H2BDP58876 126 aa15.22■□□□□ 0.03
THSD4-207ENST00000620694 HIST1H2BCP62807 126 aa15.22■□□□□ 0.03
THSD4-207ENST00000620694 HIST2H2BEQ16778 126 aa15.22■□□□□ 0.03
THSD4-207ENST00000620694 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.22■□□□□ 0.03
THSD4-207ENST00000620694 HIST1H2BHQ93079 126 aa15.22■□□□□ 0.03
THSD4-207ENST00000620694 HIST1H2BNQ99877 126 aa15.22■□□□□ 0.03
THSD4-207ENST00000620694 HIST1H2BMQ99879 126 aa15.22■□□□□ 0.03
THSD4-207ENST00000620694 FAM168BA1KXE4 195 aa15.21■□□□□ 0.03
THSD4-207ENST00000620694 H0Y8G0 127 aa15.21■□□□□ 0.03
THSD4-207ENST00000620694 FABP4P15090 132 aa15.2■□□□□ 0.02
THSD4-207ENST00000620694 FAM19A5Q7Z5A7 132 aaPredicted RBP15.19■□□□□ 0.02
THSD4-207ENST00000620694 S100A1P23297 94 aa15.18■□□□□ 0.02
THSD4-207ENST00000620694 C9orf129Q5T035 196 aaKnown RBP15.18■□□□□ 0.02
THSD4-207ENST00000620694 PHF5AQ7RTV0 110 aaKnown RBP15.18■□□□□ 0.02
THSD4-207ENST00000620694 HNRNPA3P51991 378 aaKnown RBP15.17■□□□□ 0.02
THSD4-207ENST00000620694 PRR3P79522 188 aaKnown RBP15.17■□□□□ 0.02
THSD4-207ENST00000620694 ODF1Q14990 250 aa15.16■□□□□ 0.02
THSD4-207ENST00000620694 XAGE1AQ9HD64 81 aa15.16■□□□□ 0.02
THSD4-207ENST00000620694 TMEM223A0PJW6 202 aa15.15■□□□□ 0.02
THSD4-207ENST00000620694 FLG2Q5D862 2391 aaPredicted RBP15.14■□□□□ 0.01
THSD4-207ENST00000620694 M0QXV9 152 aa15.12■□□□□ 0.01
THSD4-207ENST00000620694 ATP6V1G1O75348 118 aa15.12■□□□□ 0.01
THSD4-207ENST00000620694 SFTA2Q6UW10 78 aa15.12■□□□□ 0.01
THSD4-207ENST00000620694 KRTAP7-1Q8IUC3 87 aa15.12■□□□□ 0.01
THSD4-207ENST00000620694 MAP1LC3CQ9BXW4 147 aa15.12■□□□□ 0.01
THSD4-207ENST00000620694 PLNP26678 52 aa15.09■□□□□ 0.01
THSD4-207ENST00000620694 PFN2P35080 140 aa15.09■□□□□ 0.01
THSD4-207ENST00000620694 ZNF625Q96I27 306 aaPredicted RBP15.09■□□□□ 0.01
THSD4-207ENST00000620694 SERTAD4-AS1Q5TG53 156 aa15.08■□□□□ 0
THSD4-207ENST00000620694 PSORS1C2Q9UIG4 136 aa15.08■□□□□ 0
THSD4-207ENST00000620694 ERG28Q9UKR5 140 aa15.08■□□□□ 0
THSD4-207ENST00000620694 KRTAP29-1A8MX34 341 aaPredicted RBP15.07■□□□□ 0
THSD4-207ENST00000620694 J3QL48 77 aa15.07■□□□□ 0
THSD4-207ENST00000620694 DPM2O94777 84 aa15.07■□□□□ 0
THSD4-207ENST00000620694 PMCHL2Q9BQD1 86 aa15.07■□□□□ 0
THSD4-207ENST00000620694 MYCBP2O75592 4640 aa15.06■□□□□ 0
THSD4-207ENST00000620694 UBE2BP63146 152 aa15.06■□□□□ 0
THSD4-207ENST00000620694 COX17Q14061 63 aa15.05■□□□□ -0
THSD4-207ENST00000620694 COA6Q5JTJ3 125 aaKnown RBP15.04■□□□□ -0
THSD4-207ENST00000620694 C22orf24Q9Y442 160 aa15.04■□□□□ -0
THSD4-207ENST00000620694 OXTP01178 125 aa15.03■□□□□ -0
THSD4-207ENST00000620694 IGKCP01834 107 aa15.03■□□□□ -0
THSD4-207ENST00000620694 C1orf137Q5JT78 98 aa15.03■□□□□ -0
THSD4-207ENST00000620694 LBHQ53QV2 105 aaPredicted RBP15.02■□□□□ -0
THSD4-207ENST00000620694 KRTAP11-1Q8IUC1 163 aa15.02■□□□□ -0
THSD4-207ENST00000620694 PKHD1L1Q86WI1 4243 aa15.02□□□□□ -0.01
THSD4-207ENST00000620694 SYS1-DBNDD2H3BUS1 97 aa15.01□□□□□ -0.01
THSD4-207ENST00000620694 HERVK_113P61574 105 aa15.01□□□□□ -0.01
THSD4-207ENST00000620694 PLA2G2DQ9UNK4 145 aa15.01□□□□□ -0.01
THSD4-207ENST00000620694 SPINK6Q6UWN8 80 aa15□□□□□ -0.01
THSD4-207ENST00000620694 LINC00158P58513 81 aa14.99□□□□□ -0.01
THSD4-207ENST00000620694 SND1-IT1Q9HBX3 110 aa14.99□□□□□ -0.01
THSD4-207ENST00000620694 TP73-AS1Q9UF72 201 aa14.99□□□□□ -0.01
THSD4-207ENST00000620694 LEPROTO15243 131 aa14.98□□□□□ -0.01
THSD4-207ENST00000620694 HERV-K104P63124 156 aa14.98□□□□□ -0.01
THSD4-207ENST00000620694 MRPL55Q7Z7F7 128 aaKnown RBP14.98□□□□□ -0.01
THSD4-207ENST00000620694 PLEKHB2Q96CS7 222 aa14.98□□□□□ -0.01
THSD4-207ENST00000620694 NDUFA12Q9UI09 145 aa14.98□□□□□ -0.01
THSD4-207ENST00000620694 SRSF9Q13242 221 aaKnown RBP eCLIP14.97□□□□□ -0.01
THSD4-207ENST00000620694 MYMXA0A1B0GTQ4 84 aa14.96□□□□□ -0.01
THSD4-207ENST00000620694 MEIG1Q5JSS6 88 aa14.96□□□□□ -0.01
THSD4-207ENST00000620694 A0A0U1RRA0 63 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms